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Bai D, Ziadlou R, Vaijayanthi T, Karthikeyan S, Chinnathambi S, Parthasarathy A, Cai L, Brüggen MC, Sugiyama H, Pandian GN. Nucleic acid-based small molecules as targeted transcription therapeutics for immunoregulation. Allergy 2024; 79:843-860. [PMID: 38055191 DOI: 10.1111/all.15959] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2023] [Revised: 11/02/2023] [Accepted: 11/09/2023] [Indexed: 12/07/2023]
Abstract
Transcription therapy is an emerging approach that centers on identifying the factors associated with the malfunctioning gene transcription machinery that causes diseases and controlling them with designer agents. Until now, the primary research focus in therapeutic gene modulation has been on small-molecule drugs that target epigenetic enzymes and critical signaling pathways. However, nucleic acid-based small molecules have gained popularity in recent years for their amenability to be pre-designed and realize operative control over the dynamic transcription machinery that governs how the immune system responds to diseases. Pyrrole-imidazole polyamides (PIPs) are well-established DNA-based small-molecule gene regulators that overcome the limitations of their conventional counterparts owing to their sequence-targeted specificity, versatile regulatory efficiency, and biocompatibility. Here, we emphasize the rational design of PIPs, their functional mechanisms, and their potential as targeted transcription therapeutics for disease treatment by regulating the immune response. Furthermore, we also discuss the challenges and foresight of this approach in personalized immunotherapy in precision medicine.
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Affiliation(s)
- Dan Bai
- Institute for Biomedical Sciences, Interdisciplinary Cluster for Cutting Edge Research, Shinshu University, Matsumoto, Japan
- Research & Development Institute of Northwestern Polytechnical University in Shenzhen, Xi'an Key Laboratory of Special Medicine and Health Engineering, Xi'an, China
| | - Reihane Ziadlou
- Department of Dermatology, University Hospital Zurich, Zurich, Switzerland
- Faculty of Medicine, University of Zurich, Zurich, Switzerland
| | - Thangavel Vaijayanthi
- Chief Executive Officer, Regugene Co. Ltd., Kyoto, Japan
- Institute for Integrated Cell-Material Sciences (WPI-iCeMS), Kyoto University, Kyoto, Japan
| | - Subramani Karthikeyan
- Centre for Healthcare Advancement, Innovation and Research, Vellore Institute of Technology, Chennai, Tamil Nadu, India
| | | | | | - Li Cai
- Department of Biomedical Engineering, Rutgers University, Piscataway, New Jersey, USA
| | - Marie-Charlotte Brüggen
- Department of Dermatology, University Hospital Zurich, Zurich, Switzerland
- Faculty of Medicine, University of Zurich, Zurich, Switzerland
| | - Hiroshi Sugiyama
- Chief Executive Officer, Regugene Co. Ltd., Kyoto, Japan
- Institute for Integrated Cell-Material Sciences (WPI-iCeMS), Kyoto University, Kyoto, Japan
| | - Ganesh N Pandian
- Chief Executive Officer, Regugene Co. Ltd., Kyoto, Japan
- Institute for Integrated Cell-Material Sciences (WPI-iCeMS), Kyoto University, Kyoto, Japan
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Borkotoky L, Borra S, Maurya RA. Access to Pyrrolocoumarins through DBU‐Mediated Coupling of 2‐Oxo‐2
H
‐chromene‐3‐carbaldehydes and Phenacyl Azides. European J Org Chem 2022. [DOI: 10.1002/ejoc.202101237] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Affiliation(s)
- Lodsna Borkotoky
- Applied Organic Chemistry Group Chemical Sciences & Technology Division CSIR-North East Institute of Science & Technology (NEIST) Jorhat 785006 India
- Academy of Scientific and Innovative Research (AcSIR) Ghaziabad UP-201002 India
| | - Satheesh Borra
- SERBN-PDF Department of Organic Synthesis & Process Chemistry CSIR-Indian Institute of Chemical Technology (CSIR-IICT) Hyderabad 500007 India
| | - Ram Awatar Maurya
- Applied Organic Chemistry Group Chemical Sciences & Technology Division CSIR-North East Institute of Science & Technology (NEIST) Jorhat 785006 India
- Academy of Scientific and Innovative Research (AcSIR) Ghaziabad UP-201002 India
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Borra S, Borkotoky L, Newar UD, Das B, Maurya RA. Photocatalyst‐Free Visible‐Light Enabled Synthesis of Substituted Pyrroles from
α
‐Keto Vinyl Azides. Adv Synth Catal 2020. [DOI: 10.1002/adsc.202000562] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Affiliation(s)
- Satheesh Borra
- Applied Organic Chemistry GroupChemical Sciences & Technology DivisionCSIR-North East Institute of Science & Technology (NEIST) Jorhat 785006 India
- Academy of Scientific and Innovative Research (AcSIR)CSIR-NEIST Jorhat 785006 India
| | - Lodsna Borkotoky
- Applied Organic Chemistry GroupChemical Sciences & Technology DivisionCSIR-North East Institute of Science & Technology (NEIST) Jorhat 785006 India
- Academy of Scientific and Innovative Research (AcSIR)CSIR-NEIST Jorhat 785006 India
| | - Uma Devi Newar
- Applied Organic Chemistry GroupChemical Sciences & Technology DivisionCSIR-North East Institute of Science & Technology (NEIST) Jorhat 785006 India
- Academy of Scientific and Innovative Research (AcSIR)CSIR-NEIST Jorhat 785006 India
| | - Babulal Das
- Department of ChemistryIndian Institute of Technology Guwahati 781039 India
| | - Ram Awatar Maurya
- Applied Organic Chemistry GroupChemical Sciences & Technology DivisionCSIR-North East Institute of Science & Technology (NEIST) Jorhat 785006 India
- Academy of Scientific and Innovative Research (AcSIR)CSIR-NEIST Jorhat 785006 India
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