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Qin J, Pei D, Guo Q, Cai X, Xie L, Zhang W. Intersection-union dual-stream cross-attention Lova-SwinUnet for skin cancer hair segmentation and image repair. Comput Biol Med 2024; 180:108931. [PMID: 39079414 DOI: 10.1016/j.compbiomed.2024.108931] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2024] [Revised: 06/16/2024] [Accepted: 07/19/2024] [Indexed: 08/29/2024]
Abstract
Skin cancer images have hair occlusion problems, which greatly affects the accuracy of diagnosis and classification. Current dermoscopic hair removal methods use segmentation networks to locate hairs, and then uses repair networks to perform image repair. However, it is difficult to segment hair and capture the overall structure between hairs because of the hair being thin, unclear, and similar in color to the entire image. When conducting image restoration tasks, the only available images are those obstructed by hair, and there is no corresponding ground truth (supervised data) of the same scene without hair obstruction. In addition, the texture information and structural information used in existing repair methods are often insufficient, which leads to poor results in skin cancer image repair. To address these challenges, we propose the intersection-union dual-stream cross-attention Lova-SwinUnet (IUDC-LS). Firstly, we propose the Lova-SwinUnet module, which embeds Lovasz loss function into Swin-Unet, enabling the network to better capture features of various scales, thus obtaining better hair mask segmentation results. Secondly, we design the intersection-union (IU) module, which takes the mask results obtained in the previous step for pairwise intersection or union, and then overlays the results on the skin cancer image without hair to generate the labeled training data. This turns the unsupervised image repair task into the supervised one. Finally, we propose the dual-stream cross-attention (DC) module, which makes texture information and structure information interact with each other, and then uses cross-attention to make the network pay attention to the more important texture information and structure information in the fusion process of texture information and structure information, so as to improve the effect of image repair. The experimental results show that the PSNR index and SSIM index of the proposed method are increased by 5.4875 and 0.0401 compared with the other common methods. Experimental results unequivocally demonstrate the effectiveness of our approach, which serves as a potent tool for skin cancer detection, significantly surpassing the performance of comparable methods.
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Affiliation(s)
- Juanjuan Qin
- Shanxi Key Laboratory of Big Data Analysis and Parallel Computing, Taiyuan University of Science and Technology, Taiyuan, China.
| | - Dong Pei
- Shanxi Key Laboratory of Big Data Analysis and Parallel Computing, Taiyuan University of Science and Technology, Taiyuan, China.
| | - Qian Guo
- Shanxi Key Laboratory of Big Data Analysis and Parallel Computing, Taiyuan University of Science and Technology, Taiyuan, China.
| | - Xingjuan Cai
- Shanxi Key Laboratory of Big Data Analysis and Parallel Computing, Taiyuan University of Science and Technology, Taiyuan, China; State Key Laboratory for Novel Software Technology at Nanjing University, Nanjing University, Nanjing, China.
| | - Liping Xie
- Shanxi Key Laboratory of Big Data Analysis and Parallel Computing, Taiyuan University of Science and Technology, Taiyuan, China.
| | - Wensheng Zhang
- The Institute of Automation, Chinese Academy of Sciences (CAS), Beijing, China.
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2
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Benjdira B, M Ali A, Koubaa A, Ammar A, Boulila W. DM-AHR: A Self-Supervised Conditional Diffusion Model for AI-Generated Hairless Imaging for Enhanced Skin Diagnosis Applications. Cancers (Basel) 2024; 16:2947. [PMID: 39272805 PMCID: PMC11394327 DOI: 10.3390/cancers16172947] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2024] [Revised: 08/08/2024] [Accepted: 08/15/2024] [Indexed: 09/15/2024] Open
Abstract
Accurate skin diagnosis through end-user applications is important for early detection and cure of severe skin diseases. However, the low quality of dermoscopic images hampers this mission, especially with the presence of hair on these kinds of images. This paper introduces DM-AHR, a novel, self-supervised conditional diffusion model designed specifically for the automatic generation of hairless dermoscopic images to improve the quality of skin diagnosis applications. The current research contributes in three significant ways to the field of dermatologic imaging. First, we develop a customized diffusion model that adeptly differentiates between hair and skin features. Second, we pioneer a novel self-supervised learning strategy that is specifically tailored to optimize performance for hairless imaging. Third, we introduce a new dataset, named DERMAHAIR (DERMatologic Automatic HAIR Removal Dataset), that is designed to advance and benchmark research in this specialized domain. These contributions significantly enhance the clarity of dermoscopic images, improving the accuracy of skin diagnosis procedures. We elaborate on the architecture of DM-AHR and demonstrate its effective performance in removing hair while preserving critical details of skin lesions. Our results show an enhancement in the accuracy of skin lesion analysis when compared to existing techniques. Given its robust performance, DM-AHR holds considerable promise for broader application in medical image enhancement.
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Affiliation(s)
- Bilel Benjdira
- Robotics and Internet-of-Things Laboratory, Prince Sultan University, Riyadh 11586, Saudi Arabia
- SE & ICT Laboratory, LR18ES44, ENICarthage, University of Carthage, Tunis 1054, Tunisia
| | - Anas M Ali
- Robotics and Internet-of-Things Laboratory, Prince Sultan University, Riyadh 11586, Saudi Arabia
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf 32952, Egypt
| | - Anis Koubaa
- Robotics and Internet-of-Things Laboratory, Prince Sultan University, Riyadh 11586, Saudi Arabia
| | - Adel Ammar
- Robotics and Internet-of-Things Laboratory, Prince Sultan University, Riyadh 11586, Saudi Arabia
| | - Wadii Boulila
- Robotics and Internet-of-Things Laboratory, Prince Sultan University, Riyadh 11586, Saudi Arabia
- RIADI Laboratory, University of Manouba, Manouba 2010, Tunisia
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Fatima N, Rizvi SAM, Rizvi MSBA. Dermatological disease prediction and diagnosis system using deep learning. Ir J Med Sci 2024; 193:1295-1303. [PMID: 38036757 DOI: 10.1007/s11845-023-03578-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2023] [Accepted: 11/20/2023] [Indexed: 12/02/2023]
Abstract
The prevalence of skin illnesses is higher than that of other diseases. Fungal infection, bacteria, allergies, viruses, genetic factors, and environmental factors are among important causative factors that have continuously escalated the degree and incidence of skin diseases. Medical technology based on lasers and photonics has made it possible to identify skin illnesses considerably more rapidly and correctly. However, the cost of such a diagnosis is currently limited and prohibitively high and restricted to developed areas. The present paper develops a holistic, critical, and important skin disease prediction system that utilizes machine learning and deep learning algorithms to accurately identify up to 20 different skin diseases with a high F1 score and efficiency. Deep learning algorithms like Xception, Inception-v3, Resnet50, DenseNet121, and Inception-ResNet-v2 were employed to accurately classify diseases based on the images. The training and testing have been performed on an enlarged dataset, and classification was performed for 20 diseases. The algorithm developed was free from any inherent bias and treated all classes equally. The present model, which was trained using the Xception algorithm, is highly efficient and accurate for 20 different skin conditions, with a dataset of over 10,000 photos. The developed system was able to classify 20 different dermatological diseases with high accuracy and precision.
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Affiliation(s)
- Neda Fatima
- Manav Rachna International Institute of Research and Studies, Faridabad, Haryana, India.
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4
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Lama N, Hagerty J, Nambisan A, Stanley RJ, Van Stoecker W. Skin Lesion Segmentation in Dermoscopic Images with Noisy Data. J Digit Imaging 2023; 36:1712-1722. [PMID: 37020149 PMCID: PMC10407008 DOI: 10.1007/s10278-023-00819-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2022] [Revised: 03/15/2023] [Accepted: 03/17/2023] [Indexed: 04/07/2023] Open
Abstract
We propose a deep learning approach to segment the skin lesion in dermoscopic images. The proposed network architecture uses a pretrained EfficientNet model in the encoder and squeeze-and-excitation residual structures in the decoder. We applied this approach on the publicly available International Skin Imaging Collaboration (ISIC) 2017 Challenge skin lesion segmentation dataset. This benchmark dataset has been widely used in previous studies. We observed many inaccurate or noisy ground truth labels. To reduce noisy data, we manually sorted all ground truth labels into three categories - good, mildly noisy, and noisy labels. Furthermore, we investigated the effect of such noisy labels in training and test sets. Our test results show that the proposed method achieved Jaccard scores of 0.807 on the official ISIC 2017 test set and 0.832 on the curated ISIC 2017 test set, exhibiting better performance than previously reported methods. Furthermore, the experimental results showed that the noisy labels in the training set did not lower the segmentation performance. However, the noisy labels in the test set adversely affected the evaluation scores. We recommend that the noisy labels should be avoided in the test set in future studies for accurate evaluation of the segmentation algorithms.
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Affiliation(s)
- Norsang Lama
- Missouri University of Science &Technology, Rolla, MO, 65409, USA
| | | | - Anand Nambisan
- Missouri University of Science &Technology, Rolla, MO, 65409, USA
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Suiçmez Ç, Tolga Kahraman H, Suiçmez A, Yılmaz C, Balcı F. Detection of melanoma with hybrid learning method by removing hair from dermoscopic images using image processing techniques and wavelet transform. Biomed Signal Process Control 2023. [DOI: 10.1016/j.bspc.2023.104729] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/27/2023]
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6
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Mirikharaji Z, Abhishek K, Bissoto A, Barata C, Avila S, Valle E, Celebi ME, Hamarneh G. A survey on deep learning for skin lesion segmentation. Med Image Anal 2023; 88:102863. [PMID: 37343323 DOI: 10.1016/j.media.2023.102863] [Citation(s) in RCA: 11] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2022] [Revised: 02/01/2023] [Accepted: 05/31/2023] [Indexed: 06/23/2023]
Abstract
Skin cancer is a major public health problem that could benefit from computer-aided diagnosis to reduce the burden of this common disease. Skin lesion segmentation from images is an important step toward achieving this goal. However, the presence of natural and artificial artifacts (e.g., hair and air bubbles), intrinsic factors (e.g., lesion shape and contrast), and variations in image acquisition conditions make skin lesion segmentation a challenging task. Recently, various researchers have explored the applicability of deep learning models to skin lesion segmentation. In this survey, we cross-examine 177 research papers that deal with deep learning-based segmentation of skin lesions. We analyze these works along several dimensions, including input data (datasets, preprocessing, and synthetic data generation), model design (architecture, modules, and losses), and evaluation aspects (data annotation requirements and segmentation performance). We discuss these dimensions both from the viewpoint of select seminal works, and from a systematic viewpoint, examining how those choices have influenced current trends, and how their limitations should be addressed. To facilitate comparisons, we summarize all examined works in a comprehensive table as well as an interactive table available online3.
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Affiliation(s)
- Zahra Mirikharaji
- Medical Image Analysis Lab, School of Computing Science, Simon Fraser University, Burnaby V5A 1S6, Canada
| | - Kumar Abhishek
- Medical Image Analysis Lab, School of Computing Science, Simon Fraser University, Burnaby V5A 1S6, Canada
| | - Alceu Bissoto
- RECOD.ai Lab, Institute of Computing, University of Campinas, Av. Albert Einstein 1251, Campinas 13083-852, Brazil
| | - Catarina Barata
- Institute for Systems and Robotics, Instituto Superior Técnico, Avenida Rovisco Pais, Lisbon 1049-001, Portugal
| | - Sandra Avila
- RECOD.ai Lab, Institute of Computing, University of Campinas, Av. Albert Einstein 1251, Campinas 13083-852, Brazil
| | - Eduardo Valle
- RECOD.ai Lab, School of Electrical and Computing Engineering, University of Campinas, Av. Albert Einstein 400, Campinas 13083-952, Brazil
| | - M Emre Celebi
- Department of Computer Science and Engineering, University of Central Arkansas, 201 Donaghey Ave., Conway, AR 72035, USA.
| | - Ghassan Hamarneh
- Medical Image Analysis Lab, School of Computing Science, Simon Fraser University, Burnaby V5A 1S6, Canada.
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7
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Kasmi R, Hagerty J, Young R, Lama N, Nepal J, Miinch J, Stoecker W, Stanley RJ. SharpRazor: Automatic removal of hair and ruler marks from dermoscopy images. Skin Res Technol 2023; 29:e13203. [PMID: 37113095 PMCID: PMC10234178 DOI: 10.1111/srt.13203] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2021] [Accepted: 05/03/2022] [Indexed: 04/03/2023]
Abstract
BACKGROUND The removal of hair and ruler marks is critical in handcrafted image analysis of dermoscopic skin lesions. No other dermoscopic artifacts cause more problems in segmentation and structure detection. PURPOSE The aim of the work is to detect both white and black hair, artifacts and finally inpaint correctly the image. METHOD We introduce a new algorithm: SharpRazor, to detect hair and ruler marks and remove them from the image. Our multiple-filter approach detects hairs of varying widths within varying backgrounds, while avoiding detection of vessels and bubbles. The proposed algorithm utilizes grayscale plane modification, hair enhancement, segmentation using tri-directional gradients, and multiple filters for hair of varying widths. We develop an alternate entropy-based processing adaptive thresholding method. White or light-colored hair, and ruler marks are detected separately and added to the final hair mask. A classifier removes noise objects. Finally, a new technique of inpainting is presented, and this is utilized to remove the detected object from the lesion image. RESULTS The proposed algorithm is tested on two datasets, and compares with seven existing methods measuring accuracy, precision, recall, dice, and Jaccard scores. SharpRazor is shown to outperform existing methods. CONCLUSION The Shaprazor techniques show the promise to reach the purpose of removing and inpaint both dark and white hair in a wide variety of lesions.
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Affiliation(s)
- Reda Kasmi
- Faculty of Technology, Laboratoire de Technologie Industrielle et de l'Information (LTII)University of BejaiaBejaiaAlgeria
| | | | - Reagan Young
- Department of Electrical and Computer EngineeringMissouri University of Science and TechnologyRollaMissouriUSA
| | - Norsang Lama
- Department of Electrical and Computer EngineeringMissouri University of Science and TechnologyRollaMissouriUSA
| | - Januka Nepal
- Department of Electrical and Computer EngineeringMissouri University of Science and TechnologyRollaMissouriUSA
| | - Jessica Miinch
- Department of Electrical and Computer EngineeringMissouri University of Science and TechnologyRollaMissouriUSA
| | | | - R Joe Stanley
- Department of Electrical and Computer EngineeringMissouri University of Science and TechnologyRollaMissouriUSA
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8
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Hasan MK, Ahamad MA, Yap CH, Yang G. A survey, review, and future trends of skin lesion segmentation and classification. Comput Biol Med 2023; 155:106624. [PMID: 36774890 DOI: 10.1016/j.compbiomed.2023.106624] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2022] [Revised: 01/04/2023] [Accepted: 01/28/2023] [Indexed: 02/03/2023]
Abstract
The Computer-aided Diagnosis or Detection (CAD) approach for skin lesion analysis is an emerging field of research that has the potential to alleviate the burden and cost of skin cancer screening. Researchers have recently indicated increasing interest in developing such CAD systems, with the intention of providing a user-friendly tool to dermatologists to reduce the challenges encountered or associated with manual inspection. This article aims to provide a comprehensive literature survey and review of a total of 594 publications (356 for skin lesion segmentation and 238 for skin lesion classification) published between 2011 and 2022. These articles are analyzed and summarized in a number of different ways to contribute vital information regarding the methods for the development of CAD systems. These ways include: relevant and essential definitions and theories, input data (dataset utilization, preprocessing, augmentations, and fixing imbalance problems), method configuration (techniques, architectures, module frameworks, and losses), training tactics (hyperparameter settings), and evaluation criteria. We intend to investigate a variety of performance-enhancing approaches, including ensemble and post-processing. We also discuss these dimensions to reveal their current trends based on utilization frequencies. In addition, we highlight the primary difficulties associated with evaluating skin lesion segmentation and classification systems using minimal datasets, as well as the potential solutions to these difficulties. Findings, recommendations, and trends are disclosed to inform future research on developing an automated and robust CAD system for skin lesion analysis.
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Affiliation(s)
- Md Kamrul Hasan
- Department of Bioengineering, Imperial College London, UK; Department of Electrical and Electronic Engineering (EEE), Khulna University of Engineering & Technology (KUET), Khulna 9203, Bangladesh.
| | - Md Asif Ahamad
- Department of Electrical and Electronic Engineering (EEE), Khulna University of Engineering & Technology (KUET), Khulna 9203, Bangladesh.
| | - Choon Hwai Yap
- Department of Bioengineering, Imperial College London, UK.
| | - Guang Yang
- National Heart and Lung Institute, Imperial College London, UK; Cardiovascular Research Centre, Royal Brompton Hospital, UK.
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9
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Ashour AS, El-Wahab BSA, Wahba MA, Mansour DEA, Hodeib AAE, Khedr RAEG, Hassan GFR. Cascaded Hough Transform-Based Hair Mask Generation and Harmonic Inpainting for Automated Hair Removal from Dermoscopy Images. Diagnostics (Basel) 2022; 12:diagnostics12123040. [PMID: 36553047 PMCID: PMC9777124 DOI: 10.3390/diagnostics12123040] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2022] [Revised: 07/21/2022] [Accepted: 07/22/2022] [Indexed: 12/10/2022] Open
Abstract
Restoring information obstructed by hair is one of the main issues for the accurate analysis and segmentation of skin images. For retrieving pixels obstructed by hair, the proposed system converts dermoscopy images into the L*a*b* color space, then principal component analysis (PCA) is applied to produce grayscale images. Afterward, the contrast-limited adaptive histogram equalization (CLAHE) and the average filter are implemented to enhance the grayscale image. Subsequently, the binary image is generated using the iterative thresholding method. After that, the Hough transform (HT) is applied to each image block to generate the hair mask. Finally, the hair pixels are removed by harmonic inpainting. The performance of the proposed automated hair removal was evaluated by applying the proposed system to the International Skin Imaging Collaboration (ISIC) dermoscopy dataset as well as to clinical images. Six performance evaluation metrics were measured, namely the mean squared error (MSE), the peak signal-to-noise ratio (PSNR), the signal-to-noise ratio (SNR), the structural similarity index (SSIM), the universal quality image index (UQI), and the correlation (C). Using the clinical dataset, the system achieved MSE, PSNR, SNR, SSIM, UQI, and C values of 34.7957, 66.98, 42.39, 0.9813, 0.9801, and 0.9985, respectively. The results demonstrated that the proposed system could satisfy the medical diagnostic requirements and achieve the best performance compared to the state-of-art.
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Affiliation(s)
- Amira S. Ashour
- Department of Electronics and Electrical Communications Engineering, Faculty of Engineering, Tanta University, Tanta 31511, Egypt
- Correspondence: (A.S.A.); (D.-E.A.M.)
| | - Basant S. Abd El-Wahab
- Department of Electronics and Electrical Communications Engineering, Faculty of Engineering, Tanta University, Tanta 31511, Egypt
| | - Maram A. Wahba
- Department of Electronics and Electrical Communications Engineering, Faculty of Engineering, Tanta University, Tanta 31511, Egypt
| | - Diaa-Eldin A. Mansour
- Department of Electrical Power and Machines Engineering, Faculty of Engineering, Tanta University, Tanta 31511, Egypt
- Correspondence: (A.S.A.); (D.-E.A.M.)
| | - Abeer Abd Elhakam Hodeib
- Department of Dermatology and Venereology, Faculty of Medicine, Tanta University, Tanta 31511, Egypt
| | | | - Ghada F. R. Hassan
- Department of Dermatology and Venereology, Faculty of Medicine, Tanta University, Tanta 31511, Egypt
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10
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Song X, Guo S, Han L, Wang L, Yang W, Wang G, Anil Baris C. Research on hair removal algorithm of dermatoscopic images based on maximum variance fuzzy clustering and optimization Criminisi algorithm. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2022.103967] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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11
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Hairlines removal and low contrast enhancement of melanoma skin images using convolutional neural network with aggregation of contextual information. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2022.103653] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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12
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A Dermoscopic Inspired System for Localization and Malignancy Classification of Melanocytic Lesions. APPLIED SCIENCES-BASEL 2022. [DOI: 10.3390/app12094243] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
This study aims at developing a clinically oriented automated diagnostic tool for distinguishing malignant melanocytic lesions from benign melanocytic nevi in diverse image databases. Due to the presence of artifacts, smooth lesion boundaries, and subtlety in diagnostic features, the accuracy of such systems gets hampered. Thus, the proposed framework improves the accuracy of melanoma detection by combining the clinical aspects of dermoscopy. Two methods have been adopted for achieving the aforementioned objective. Firstly, artifact removal and lesion localization are performed. In the second step, various clinically significant features such as shape, color, texture, and pigment network are detected. Features are further reduced by checking their individual significance (i.e., hypothesis testing). These reduced feature vectors are then classified using SVM classifier. Features specific to the domain have been used for this design as opposed to features of the abstract images. The domain knowledge of an expert gets enhanced by this methodology. The proposed approach is implemented on a multi-source dataset (PH2 + ISBI 2016 and 2017) of 515 annotated images, thereby resulting in sensitivity, specificity and accuracy of 83.8%, 88.3%, and 86%, respectively. The experimental results are promising, and can be applied to detect asymmetry, pigment network, colors, and texture of the lesions.
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System for the Recognizing of Pigmented Skin Lesions with Fusion and Analysis of Heterogeneous Data Based on a Multimodal Neural Network. Cancers (Basel) 2022; 14:cancers14071819. [PMID: 35406591 PMCID: PMC8997449 DOI: 10.3390/cancers14071819] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2022] [Revised: 03/30/2022] [Accepted: 03/30/2022] [Indexed: 02/07/2023] Open
Abstract
Simple Summary Skin cancer is one of the most common cancers in humans. This study aims to create a system for recognizing pigmented skin lesions by analyzing heterogeneous data based on a multimodal neural network. Fusing patient statistics and multidimensional visual data allows for finding additional links between dermoscopic images and medical diagnostic results, significantly improving neural network classification accuracy. The use by specialists of the proposed system of neural network recognition of pigmented skin lesions will enhance the efficiency of diagnosis compared to visual diagnostic methods. Abstract Today, skin cancer is one of the most common malignant neoplasms in the human body. Diagnosis of pigmented lesions is challenging even for experienced dermatologists due to the wide range of morphological manifestations. Artificial intelligence technologies are capable of equaling and even surpassing the capabilities of a dermatologist in terms of efficiency. The main problem of implementing intellectual analysis systems is low accuracy. One of the possible ways to increase this indicator is using stages of preliminary processing of visual data and the use of heterogeneous data. The article proposes a multimodal neural network system for identifying pigmented skin lesions with a preliminary identification, and removing hair from dermatoscopic images. The novelty of the proposed system lies in the joint use of the stage of preliminary cleaning of hair structures and a multimodal neural network system for the analysis of heterogeneous data. The accuracy of pigmented skin lesions recognition in 10 diagnostically significant categories in the proposed system was 83.6%. The use of the proposed system by dermatologists as an auxiliary diagnostic method will minimize the impact of the human factor, assist in making medical decisions, and expand the possibilities of early detection of skin cancer.
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14
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Bardou D, Bouaziz H, Lv L, Zhang T. Hair removal in dermoscopy images using variational autoencoders. Skin Res Technol 2022; 28:445-454. [PMID: 35254677 PMCID: PMC9907627 DOI: 10.1111/srt.13145] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2021] [Accepted: 01/17/2022] [Indexed: 01/23/2023]
Abstract
BACKGROUND In recent years, melanoma is rising at a faster rate compared to other cancers. Although it is the most serious type of skin cancer, the diagnosis at early stages makes it curable. Dermoscopy is a reliable medical technique used to detect melanoma by using a dermoscope to examine the skin. In the last few decades, digital imaging devices have made great progress which allowed capturing and storing high-quality images from these examinations. The stored images are now being standardized and used for the automatic detection of melanoma. However, when the hair covers the skin, this makes the task challenging. Therefore, it is important to eliminate the hair to get accurate results. METHODS In this paper, we propose a simple yet efficient method for hair removal using a variational autoencoder without the need for paired samples. The encoder takes as input a dermoscopy image and builds a latent distribution that ignores hair as it is considered noise, while the decoder reconstructs a hair-free image. Both encoder and decoder use a decent convolutional neural networks architecture that provides high performance. The construction of our model comprises two stages of training. In the first stage, the model has trained on hair-occluded images to output hair-free images, and in the second stage, it is optimized using hair-free images to preserve the image textures. Although the variational autoencoder produces hair-free images, it does not maintain the quality of the generated images. Thus, we explored the use of three-loss functions including the structural similarity index (SSIM), L1-norm, and L2-norm to improve the visual quality of the generated images. RESULTS The evaluation of the hair-free reconstructed images is carried out using t-distributed stochastic neighbor embedding (SNE) feature mapping by visualizing the distribution of the real hair-free images and the synthesized hair-free images. The conducted experiments on the publicly available dataset HAM10000 show that our method is very efficient.
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Affiliation(s)
- Dalal Bardou
- Department of Computer Science and Mathematics University of Abbes Laghrour Khenchela Algeria
| | - Hamida Bouaziz
- Mécatronique Laboratory Department of Computer Science Jijel University Jijel Algeria
| | - Laishui Lv
- School of Computer Science and Engineering Nanjing University of Science and Technology Nanjing China
| | - Ting Zhang
- School of Computer Science and Engineering Nanjing University of Science and Technology Nanjing China
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15
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Posterior temperature optimized Bayesian models for inverse problems in medical imaging. Med Image Anal 2022; 78:102382. [DOI: 10.1016/j.media.2022.102382] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2021] [Revised: 11/09/2021] [Accepted: 02/01/2022] [Indexed: 11/21/2022]
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16
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An industrial portrait background removal solution based on knowledge infusion. APPL INTELL 2022. [DOI: 10.1007/s10489-021-03099-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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17
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Skin Lesion Extraction Using Multiscale Morphological Local Variance Reconstruction Based Watershed Transform and Fast Fuzzy C-Means Clustering. Symmetry (Basel) 2021. [DOI: 10.3390/sym13112085] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022] Open
Abstract
Early identification of melanocytic skin lesions increases the survival rate for skin cancer patients. Automated melanocytic skin lesion extraction from dermoscopic images using the computer vision approach is a challenging task as the lesions present in the image can be of different colors, there may be a variation of contrast near the lesion boundaries, lesions may have different sizes and shapes, etc. Therefore, lesion extraction from dermoscopic images is a fundamental step for automated melanoma identification. In this article, a watershed transform based on the fast fuzzy c-means (FCM) clustering algorithm is proposed for the extraction of melanocytic skin lesion from dermoscopic images. Initially, the proposed method removes the artifacts from the dermoscopic images and enhances the texture regions. Further, it is filtered using a Gaussian filter and a local variance filter to enhance the lesion boundary regions. Later, the watershed transform based on MMLVR (multiscale morphological local variance reconstruction) is introduced to acquire the superpixels of the image with accurate boundary regions. Finally, the fast FCM clustering technique is implemented in the superpixels of the image to attain the final lesion extraction result. The proposed method is tested in the three publicly available skin lesion image datasets, i.e., ISIC 2016, ISIC 2017 and ISIC 2018. Experimental evaluation shows that the proposed method achieves a good result.
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Skin Lesion Detection Algorithms in Whole Body Images. SENSORS 2021; 21:s21196639. [PMID: 34640959 PMCID: PMC8513024 DOI: 10.3390/s21196639] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/10/2021] [Revised: 09/27/2021] [Accepted: 10/02/2021] [Indexed: 11/29/2022]
Abstract
Melanoma is one of the most lethal and rapidly growing cancers, causing many deaths each year. This cancer can be treated effectively if it is detected quickly. For this reason, many algorithms and systems have been developed to support automatic or semiautomatic detection of neoplastic skin lesions based on the analysis of optical images of individual moles. Recently, full-body systems have gained attention because they enable the analysis of the patient’s entire body based on a set of photos. This paper presents a prototype of such a system, focusing mainly on assessing the effectiveness of algorithms developed for the detection and segmentation of lesions. Three detection algorithms (and their fusion) were analyzed, one implementing deep learning methods and two classic approaches, using local brightness distribution and a correlation method. For fusion of algorithms, detection sensitivity = 0.95 and precision = 0.94 were obtained. Moreover, the values of the selected geometric parameters of segmented lesions were calculated and compared for all algorithms. The obtained results showed a high accuracy of the evaluated parameters (error of area estimation <10%), especially for lesions with dimensions greater than 3 mm, which are the most suspected of being neoplastic lesions.
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Baig R, Bibi M, Hamid A, Kausar S, Khalid S. Deep Learning Approaches Towards Skin Lesion Segmentation and Classification from Dermoscopic Images - A Review. Curr Med Imaging 2021; 16:513-533. [PMID: 32484086 DOI: 10.2174/1573405615666190129120449] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2018] [Revised: 12/17/2018] [Accepted: 01/02/2019] [Indexed: 02/08/2023]
Abstract
BACKGROUND Automated intelligent systems for unbiased diagnosis are primary requirement for the pigment lesion analysis. It has gained the attention of researchers in the last few decades. These systems involve multiple phases such as pre-processing, feature extraction, segmentation, classification and post processing. It is crucial to accurately localize and segment the skin lesion. It is observed that recent enhancements in machine learning algorithms and dermoscopic techniques reduced the misclassification rate therefore, the focus towards computer aided systems increased exponentially in recent years. Computer aided diagnostic systems are reliable source for dermatologists to analyze the type of cancer, but it is widely acknowledged that even higher accuracy is needed for computer aided diagnostic systems to be adopted practically in the diagnostic process of life threatening diseases. INTRODUCTION Skin cancer is one of the most threatening cancers. It occurs by the abnormal multiplication of cells. The core three types of skin cells are: Squamous, Basal and Melanocytes. There are two wide classes of skin cancer; Melanocytic and non-Melanocytic. It is difficult to differentiate between benign and malignant melanoma, therefore dermatologists sometimes misclassify the benign and malignant melanoma. Melanoma is estimated as 19th most frequent cancer, it is riskier than the Basel and Squamous carcinoma because it rapidly spreads throughout the body. Hence, to lower the death risk, it is critical to diagnose the correct type of cancer in early rudimentary phases. It can occur on any part of body, but it has higher probability to occur on chest, back and legs. METHODS The paper presents a review of segmentation and classification techniques for skin lesion detection. Dermoscopy and its features are discussed briefly. After that Image pre-processing techniques are described. A thorough review of segmentation and classification phases of skin lesion detection using deep learning techniques is presented Literature is discussed and a comparative analysis of discussed methods is presented. CONCLUSION In this paper, we have presented the survey of more than 100 papers and comparative analysis of state of the art techniques, model and methodologies. Malignant melanoma is one of the most threating and deadliest cancers. Since the last few decades, researchers are putting extra attention and effort in accurate diagnosis of melanoma. The main challenges of dermoscopic skin lesion images are: low contrasts, multiple lesions, irregular and fuzzy borders, blood vessels, regression, hairs, bubbles, variegated coloring and other kinds of distortions. The lack of large training dataset makes these problems even more challenging. Due to recent advancement in the paradigm of deep learning, and specially the outstanding performance in medical imaging, it has become important to review the deep learning algorithms performance in skin lesion segmentation. Here, we have discussed the results of different techniques on the basis of different evaluation parameters such as Jaccard coefficient, sensitivity, specificity and accuracy. And the paper listed down the major achievements in this domain with the detailed discussion of the techniques. In future, it is expected to improve results by utilizing the capabilities of deep learning frameworks with other pre and post processing techniques so reliable and accurate diagnostic systems can be built.
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Affiliation(s)
- Ramsha Baig
- Department of Computer Science, Bahria University, Islamabad, Pakistan
| | - Maryam Bibi
- Department of Computer Science, Bahria University, Islamabad, Pakistan
| | - Anmol Hamid
- Department of Computer Science, Bahria University, Islamabad, Pakistan
| | - Sumaira Kausar
- Department of Computer Science, Bahria University, Islamabad, Pakistan
| | - Shahzad Khalid
- Department of Computer Engineering, Bahria University, Islamabad, Pakistan
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Gupta AK, Ivanova IA, Renaud HJ. How good is artificial intelligence (AI) at solving hairy problems? A review of AI applications in hair restoration and hair disorders. Dermatol Ther 2021; 34:e14811. [PMID: 33496058 DOI: 10.1111/dth.14811] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2020] [Revised: 01/05/2021] [Accepted: 01/21/2021] [Indexed: 01/09/2023]
Abstract
Artificial intelligence (AI) applications in medicine are rapidly evolving. Deep learning diagnostic models that can accurately classify skin lesions have been developed. New AI applications are also starting to emerge in the hair restoration field. The objective was to review the current and future clinical applications of AI in hair restoration and hair disorder diagnosis. Current AI applications in hair restoration include fully automated systems for hair detection and hair growth measurement. New deep learning-based systems have been proposed for scalp diagnosis and automated hair loss measurements, including devices that can be used for self-diagnosis. Hair restoration experts should recognize the potential benefits and limitations of these emerging technologies as they become more readily available to both clinicians and patients.
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Affiliation(s)
- Aditya K Gupta
- Mediprobe Research Inc., London, Canada.,Division of Dermatology, Department of Medicine, University of Toronto School of Medicine, Toronto, Canada
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Andrade C, Teixeira LF, Vasconcelos MJM, Rosado L. Data Augmentation Using Adversarial Image-to-Image Translation for the Segmentation of Mobile-Acquired Dermatological Images. J Imaging 2020; 7:2. [PMID: 34460573 PMCID: PMC8321267 DOI: 10.3390/jimaging7010002] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2020] [Revised: 12/04/2020] [Accepted: 12/16/2020] [Indexed: 11/18/2022] Open
Abstract
Dermoscopic images allow the detailed examination of subsurface characteristics of the skin, which led to creating several substantial databases of diverse skin lesions. However, the dermoscope is not an easily accessible tool in some regions. A less expensive alternative could be acquiring medium resolution clinical macroscopic images of skin lesions. However, the limited volume of macroscopic images available, especially mobile-acquired, hinders developing a clinical mobile-based deep learning approach. In this work, we present a technique to efficiently utilize the sizable number of dermoscopic images to improve the segmentation capacity of macroscopic skin lesion images. A Cycle-Consistent Adversarial Network is used to translate the image between the two distinct domains created by the different image acquisition devices. A visual inspection was performed on several databases for qualitative evaluation of the results, based on the disappearance and appearance of intrinsic dermoscopic and macroscopic features. Moreover, the Fréchet Inception Distance was used as a quantitative metric. The quantitative segmentation results are demonstrated on the available macroscopic segmentation databases, SMARTSKINS and Dermofit Image Library, yielding test set thresholded Jaccard Index of 85.13% and 74.30%. These results establish a new state-of-the-art performance in the SMARTSKINS database.
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Affiliation(s)
- Catarina Andrade
- Fraunhofer Portugal AICOS, Rua Alfredo Allen, 4200-135 Porto, Portugal; (M.J.M.V.); (L.R.)
| | - Luís F. Teixeira
- Faculty of Engineering, University of Porto, Rua Dr. Roberto Frias, 4200-465 Porto, Portugal;
- INESC TEC, Rua Dr. Roberto Frias, 4200-465 Porto, Portugal
| | | | - Luís Rosado
- Fraunhofer Portugal AICOS, Rua Alfredo Allen, 4200-135 Porto, Portugal; (M.J.M.V.); (L.R.)
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Attia M, Hossny M, Zhou H, Nahavandi S, Asadi H, Yazdabadi A. Realistic hair simulator for skin lesion images: A novel benchemarking tool. Artif Intell Med 2020; 108:101933. [PMID: 32972662 DOI: 10.1016/j.artmed.2020.101933] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/26/2019] [Revised: 06/05/2020] [Accepted: 07/13/2020] [Indexed: 11/15/2022]
Abstract
Automated skin lesion analysis is one of the trending fields that has gained attention among the dermatologists and health care practitioners. Skin lesion restoration is an essential pre-processing step for lesion enhancements for accurate automated analysis and diagnosis by both dermatologists and computer-aided diagnosis tools. Hair occlusion is one of the most popular artifacts in dermatoscopic images. It can negatively impact the skin lesions diagnosis by both dermatologists and automated computer diagnostic tools. Digital hair removal is a non-invasive method for image enhancement for decrease the hair-occlusion artifact in previously captured images. Several hair removal methods were proposed for skin delineation and removal without standardized benchmarking techniques. Manual annotation is one of the main challenges that hinder the validation of these proposed methods on a large number of images or against benchmarking datasets for comparison purposes. In the presented work, we propose a photo-realistic hair simulator based on context-aware image synthesis using image-to-image translation techniques via conditional adversarial generative networks for generation of different hair occlusions in skin images, along with ground-truth mask for hair location. Hair-occluded image is synthesized using the latent structure of any input hair-free image by deep encoding the input image into a latent vector of features. The locations of required hair are highlighted using white pixels on the input image. Then, these deep encoded features are used to reconstruct the synthetic highly realistic hair-occluded image. Besides, we explored using three loss functions including L1-norm, L2-norm and structural similarity index (SSIM) to maximize the image synthesis visual quality. For the evaluation of the generated samples, the t-SNE feature mapping and Bland-Altman test are used as visualization tools for the experimental results. The results show the superior performance of our proposed method compared to previous methods for hair synthesis with plausible colours and preserving the integrity of the lesion texture. The proposed method can be used to generate benchmarking datasets for comparing the performance of digital hair removal methods. The code is available online at: https://github.com/attiamohammed/realhair.
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Affiliation(s)
- Mohamed Attia
- Institute for Intelligent Systems Research and Innovation, Deakin University, Australia; Medical Research Institute, Alexandria University, Egypt.
| | - Mohammed Hossny
- Institute for Intelligent Systems Research and Innovation, Deakin University, Australia.
| | - Hailing Zhou
- Institute for Intelligent Systems Research and Innovation, Deakin University, Australia.
| | - Saeid Nahavandi
- Institute for Intelligent Systems Research and Innovation, Deakin University, Australia.
| | - Hamed Asadi
- School of Medicine, Melbourne University, Australia.
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Banerjee S, Singh SK, Chakraborty A, Das A, Bag R. Melanoma Diagnosis Using Deep Learning and Fuzzy Logic. Diagnostics (Basel) 2020; 10:E577. [PMID: 32784837 PMCID: PMC7459879 DOI: 10.3390/diagnostics10080577] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2020] [Revised: 07/31/2020] [Accepted: 08/02/2020] [Indexed: 01/06/2023] Open
Abstract
Melanoma or malignant melanoma is a type of skin cancer that develops when melanocyte cells, damaged by excessive exposure to harmful UV radiations, start to grow out of control. Though less common than some other kinds of skin cancers, it is more dangerous because it rapidly metastasizes if not diagnosed and treated at an early stage. The distinction between benign and melanocytic lesions could at times be perplexing, but the manifestations of the disease could fairly be distinguished by a skilled study of its histopathological and clinical features. In recent years, deep convolutional neural networks (DCNNs) have succeeded in achieving more encouraging results yet faster and computationally effective systems for detection of the fatal disease are the need of the hour. This paper presents a deep learning-based 'You Only Look Once (YOLO)' algorithm, which is based on the application of DCNNs to detect melanoma from dermoscopic and digital images and offer faster and more precise output as compared to conventional CNNs. In terms with the location of the identified object in the cell, this network predicts the bounding box of the detected object and the class confidence score. The highlight of the paper, however, lies in its infusion of certain resourceful concepts like two phase segmentation done by a combination of the graph theory using minimal spanning tree concept and L-type fuzzy number based approximations and mathematical extraction of the actual affected area of the lesion region during feature extraction process. Experimented on a total of 20250 images from three publicly accessible datasets-PH2, International Symposium on Biomedical Imaging (ISBI) 2017 and The International Skin Imaging Collaboration (ISIC) 2019, encouraging results have been obtained. It achieved a Jac score of 79.84% on ISIC 2019 dataset and 86.99% and 88.64% on ISBI 2017 and PH2 datasets, respectively. Upon comparison of the pre-defined parameters with recent works in this area yielded comparatively superior output in most cases.
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Affiliation(s)
- Shubhendu Banerjee
- Department of CSE, Narula Institute of Technology, Kolkata 700109, India;
| | - Sumit Kumar Singh
- Department of CSE, Narula Institute of Technology, Kolkata 700109, India;
| | - Avishek Chakraborty
- Department of Basic Science and Humanities, Narula Institute of Technology, Kolkata 700109, India;
| | - Atanu Das
- Department of MCA, Netaji Subhash Engineering College, Kolkata 700152, India;
| | - Rajib Bag
- Department of CSE, Supreme Knowledge Foundation Group of Institutions, Mankundu 712139, India;
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Durgarao N, Sudhavani G. Detection of skin cancer with adaptive fuzzy classifier using improved whale optimization. BIOMED ENG-BIOMED TE 2020; 65:605-619. [DOI: 10.1515/bmt-2018-0110] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2018] [Accepted: 02/14/2020] [Indexed: 11/15/2022]
Abstract
AbstractSkin cancer is considered as a well-known type of cancer globally, and its occurrence has been found to be raised in current days. Researchers state that the disease requires early prediction so that the identification of precise signs will make it simple for the dermatologists and clinicians. This disorder has been established to be unpredictable. Hence, this paper intends to develop an efficient skin cancer detection scheme, which classifies the nature of cancer, whether it is normal, benign or malignant. Accordingly, the skin image which is given as input is segmented using k-means clustering model and the features are extracted from segmented image using Local Vector Pattern (LVP). Moreover, the extracted features are subjected to fuzzy classifier for recognizing the cancer. In addition, the limits of membership functions are optimally selected by improved Whale Optimization Algorithm (WOA). Thus, the proposed scheme is termed as Improved Selection of Encircling and Spiral updating position of WO-based Fuzzy Classifier (ISESW-FC). From the optimized output, the type of skin cancer image can be determined, whether it is normal, benign or malignant. The performance of proposed model is compared over other conventional methods, and its efficiency is proved by means of Type I and Type II measures.
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Affiliation(s)
- Nagayalanka Durgarao
- Department of ECE, R.V.R. & J.C. College of Engineering, Guntur, Andhra Pradesh, India
| | - Ghanta Sudhavani
- Department of ECE, R.V.R. & J.C. College of Engineering, Guntur, Andhra Pradesh, India
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Pereira PM, Fonseca-Pinto R, Paiva RP, Assuncao PA, Tavora LM, Thomaz LA, Faria SM. Skin lesion classification enhancement using border-line features – The melanoma vs nevus problem. Biomed Signal Process Control 2020. [DOI: 10.1016/j.bspc.2019.101765] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Abstract
OBJECTIVE Dermoscopy is a useful technique for improving the diagnostic accuracy of various types of skin disorders. In China, dermoscopy has been widely accepted, and domestic researchers have made tremendous progress in the field of dermoscopy. The main purpose of this review is to summarize the current status of dermoscopy in China and identify its future directions. DATA SOURCES Articles included in this review were obtained by searching the following databases: Wanfang, China National Knowledge Infrastructure, PubMed, and the Web of Science. We focused on research published before 2019 with keywords including dermoscopy, dermoscopic, dermoscope and trichoscopy. STUDY SELECTION A total of 50 studies were selected. Of these studies, 20 studies were in Chinese and 30 in English, research samples of all the studies were collected from Chinese populations. RESULTS Since 2000, more than 380 articles about dermoscopy have been published in domestic or foreign journals. Dermoscopy can improve the diagnostic accuracy of neoplastic diseases, evaluating the therapeutic effect of treatment, and determining the treatment endpoint, and it can also assist in the differential diagnosis of inflammatory diseases and in the assessment of the severity of the disease. In addition, researches about the applications of dermoscopy during surgical treatment have been published. Training courses aiming to improve the diagnostic ability of dermatologists, either face-to-face or online, have been offered. The Chinese Skin Image Database, launched in 2017 as a work platform for dermatologists, has promoted the development of dermoscopy in China. Computer-aided diagnostic systems based on the Chinese population are ready for use. In the future, cooperation, resource sharing, talent development, image management, and computer-aided diagnosis will be important directions for the development of dermoscopy in China. CONCLUSION Dermoscopy has been widely used and developed in China, however, it still needs to address more challenges in the future.
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Talavera-Martínez L, Bibiloni P, González-Hidalgo M. Computational texture features of dermoscopic images and their link to the descriptive terminology: A survey. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2019; 182:105049. [PMID: 31494412 DOI: 10.1016/j.cmpb.2019.105049] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2019] [Revised: 08/12/2019] [Accepted: 08/23/2019] [Indexed: 06/10/2023]
Abstract
Computer-extracted texture features are relevant to diagnose cutaneous lesions such as melanomas. Our goal is to set a relationship between a well-established descriptive terminology, which describes the attributes of dermoscopic structures based on their aspect rather than their underlying causes, and the computational methods to extract texture-based features. By tackling this problem, we can ascertain what indicators used by dermatologists are reflected in the extracted texture features. We first review the state-of-the-art models for texture extraction in dermoscopic images. By comparing the methods' performance and goals, we conclude that (I) a single color space does not seem to give performances as good as using several ones, thus the latter is reasonable (II) the optimal number of extracted features seems to vary depending on the method's goal, and extracting a large number of features can lead to a loss of models robustness (III) methods such as GLCM, Sobel or Law energy filters are mainly used to capture local properties to detect specific dermoscopic structures (IV) methods that extract local and global features, like Gabor wavelets or SPT, tend to be used to analyze the presence of certain patterns of dermoscopic structures, e.g. globular, reticular, etc.
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Affiliation(s)
- Lidia Talavera-Martínez
- Universitat de les Illes Balears, SCOPIA Research Group, Palma 07122, Spain; Balearic Islands Health Research Institute (IdISBa), Palma 07010, Spain.
| | - Pedro Bibiloni
- Universitat de les Illes Balears, SCOPIA Research Group, Palma 07122, Spain; Balearic Islands Health Research Institute (IdISBa), Palma 07010, Spain.
| | - Manuel González-Hidalgo
- Universitat de les Illes Balears, SCOPIA Research Group, Palma 07122, Spain; Balearic Islands Health Research Institute (IdISBa), Palma 07010, Spain.
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Gu Y, Ge Z, Bonnington CP, Zhou J. Progressive Transfer Learning and Adversarial Domain Adaptation for Cross-Domain Skin Disease Classification. IEEE J Biomed Health Inform 2019; 24:1379-1393. [PMID: 31545748 DOI: 10.1109/jbhi.2019.2942429] [Citation(s) in RCA: 33] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
Deep learning has been used to analyze and diagnose various skin diseases through medical imaging. However, recent researches show that a well-trained deep learning model may not generalize well to data from different cohorts due to domain shift. Simple data fusion techniques such as combining disease samples from different data sources are not effective to solve this problem. In this paper, we present two methods for a novel task of cross-domain skin disease recognition. Starting from a fully supervised deep convolutional neural network classifier pre-trained on ImageNet, we explore a two-step progressive transfer learning technique by fine-tuning the network on two skin disease datasets. We then propose to adopt adversarial learning as a domain adaptation technique to perform invariant attribute translation from source to target domain in order to improve the recognition performance. In order to evaluate these two methods, we analyze generalization capability of the trained model on melanoma detection, cancer detection, and cross-modality learning tasks on two skin image datasets collected from different clinical settings and cohorts with different disease distributions. The experiments prove the effectiveness of our method in solving the domain shift problem.
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Attia M, Hossny M, Zhou H, Nahavandi S, Asadi H, Yazdabadi A. Digital hair segmentation using hybrid convolutional and recurrent neural networks architecture. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2019; 177:17-30. [PMID: 31319945 DOI: 10.1016/j.cmpb.2019.05.010] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/20/2019] [Revised: 04/17/2019] [Accepted: 05/13/2019] [Indexed: 06/10/2023]
Abstract
BACKGROUND AND OBJECTIVE Skin melanoma is one of the major health problems in many countries. Dermatologists usually diagnose melanoma by visual inspection of moles. Digital hair removal can provide a non-invasive way to remove hair and hair-like regions as a pre-processing step for skin lesion images. Hair removal has two main steps: hair segmentation and hair gaps inpainting. However, hair segmentation is a challenging task which requires manual tuning of thresholding parameters. Hard-coded threshold leads to over-segmentation (false positives) which in return changes the textural integrity of lesions and or under-segmentation (false negatives) which leaves hair traces and artefacts which affect subsequent diagnosis. Additionally, dermal hair exhibits different characteristics: thin; overlapping; faded; occluded and overlaid on textured lesions. METHODS In this presented paper, we proposed a deep learning approach based on a hybrid network of convolutional and recurrent layers for hair segmentation using weakly labelled data. We utilised the deep encoded features for accurate detection and delineation of hair in skin images. The encoded features are then fed into recurrent neural network layers to encode the spatial dependencies between disjointed patches. Experiments are conducted on a publicly available dataset, called "Towards Melanoma Detection: Challenge". We chose two metrics to evaluate the produced segmentation masks. The first metric is the Jaccard Index which penalises false positives and false negatives. The second metric is the tumour disturb pattern which assesses the overall effect over the lesion texture due to unnecessary inpainting as a result of over segmentation. The qualitative and quantitative evaluations are employed to compare the proposed technique with state-of-the-art methods. RESULTS The proposed approach showed superior segmentation accuracy as demonstrated by a Jaccard Index of 77.8% in comparison to a 66.5% reported by the state-of-the-art method. We also achieved tumour disturb pattern as low as 14% compared to 23% for the state-of-the-art method. CONCLUSION The hybrid architecture for segmentation was able to accurately delineate and segment the hair from the background including lesions and the skin using weakly labelled ground truth for training.
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Affiliation(s)
- Mohamed Attia
- Institute for Intelligent Systems Research and Innovation, Deakin University, Australia.
| | - Mohammed Hossny
- Institute for Intelligent Systems Research and Innovation, Deakin University, Australia.
| | - Hailing Zhou
- Institute for Intelligent Systems Research and Innovation, Deakin University, Australia.
| | - Saeid Nahavandi
- Institute for Intelligent Systems Research and Innovation, Deakin University, Australia.
| | - Hamed Asadi
- School of Medicine, Melbourne University, Australia.
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Abstract
Among the different types of skin cancer, melanoma is considered to be the deadliest and is difficult to treat at advanced stages. Detection of melanoma at earlier stages can lead to reduced mortality rates. Desktop-based computer-aided systems have been developed to assist dermatologists with early diagnosis. However, there is significant interest in developing portable, at-home melanoma diagnostic systems which can assess the risk of cancerous skin lesions. Here, we present a smartphone application that combines image capture capabilities with preprocessing and segmentation to extract the Asymmetry, Border irregularity, Color variegation, and Diameter (ABCD) features of a skin lesion. Using the feature sets, classification of malignancy is achieved through support vector machine classifiers. By using adaptive algorithms in the individual data-processing stages, our approach is made computationally light, user friendly, and reliable in discriminating melanoma cases from benign ones. Images of skin lesions are either captured with the smartphone camera or imported from public datasets. The entire process from image capture to classification runs on an Android smartphone equipped with a detachable 10x lens, and processes an image in less than a second. The overall performance metrics are evaluated on a public database of 200 images with Synthetic Minority Over-sampling Technique (SMOTE) (80% sensitivity, 90% specificity, 88% accuracy, and 0.85 area under curve (AUC)) and without SMOTE (55% sensitivity, 95% specificity, 90% accuracy, and 0.75 AUC). The evaluated performance metrics and computation times are comparable or better than previous methods. This all-inclusive smartphone application is designed to be easy-to-download and easy-to-navigate for the end user, which is imperative for the eventual democratization of such medical diagnostic systems.
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Barata C, Celebi ME, Marques JS. A Survey of Feature Extraction in Dermoscopy Image Analysis of Skin Cancer. IEEE J Biomed Health Inform 2019; 23:1096-1109. [DOI: 10.1109/jbhi.2018.2845939] [Citation(s) in RCA: 81] [Impact Index Per Article: 16.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Pathan S, Gopalakrishna Prabhu K, Siddalingaswamy P. Automated detection of melanocytes related pigmented skin lesions: A clinical framework. Biomed Signal Process Control 2019. [DOI: 10.1016/j.bspc.2019.02.013] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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34
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Celebi ME, Codella N, Halpern A. Dermoscopy Image Analysis: Overview and Future Directions. IEEE J Biomed Health Inform 2019; 23:474-478. [DOI: 10.1109/jbhi.2019.2895803] [Citation(s) in RCA: 76] [Impact Index Per Article: 15.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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35
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Mahbod A, Schaefer G, Ellinger I, Ecker R, Pitiot A, Wang C. Fusing fine-tuned deep features for skin lesion classification. Comput Med Imaging Graph 2019; 71:19-29. [DOI: 10.1016/j.compmedimag.2018.10.007] [Citation(s) in RCA: 48] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2017] [Revised: 09/30/2018] [Accepted: 10/30/2018] [Indexed: 10/27/2022]
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36
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Zhang X, Wang S, Liu J, Tao C. Towards improving diagnosis of skin diseases by combining deep neural network and human knowledge. BMC Med Inform Decis Mak 2018; 18:59. [PMID: 30066649 PMCID: PMC6069289 DOI: 10.1186/s12911-018-0631-9] [Citation(s) in RCA: 48] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/03/2022] Open
Abstract
BACKGROUND The emergence of the deep convolutional neural network (CNN) greatly improves the quality of computer-aided supporting systems. However, due to the challenges of generating reliable and timely results, clinical adoption of computer-aided diagnosis systems is still limited. Recent informatics research indicates that machine learning algorithms need to be combined with sufficient clinical expertise in order to achieve an optimal result. METHODS In this research, we used deep learning algorithms to help diagnose four common cutaneous diseases based on dermoscopic images. In order to facilitate decision-making and improve the accuracy of our algorithm, we summarized classification/diagnosis scenarios based on domain expert knowledge and semantically represented them in a hierarchical structure. RESULTS Our algorithm achieved an accuracy of 87.25 ± 2.24% in our test dataset with 1067 images. The semantic summarization of diagnosis scenarios can help further improve the algorithm to facilitate future computer-aided decision support. CONCLUSIONS In this paper, we applied deep neural network algorithm to classify dermoscopic images of four common skin diseases and archived promising results. Based on the results, we further summarized the diagnosis/classification scenarios, which reflect the importance of combining the efforts of both human expertise and computer algorithms in dermatologic diagnoses.
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Affiliation(s)
- Xinyuan Zhang
- School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Huston, TX USA
| | - Shiqi Wang
- Department of Dermatology, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China
| | - Jie Liu
- Department of Dermatology, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China
| | - Cui Tao
- School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Huston, TX USA
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Singh N, Gupta SK. Recent advancement in the early detection of melanoma using computerized tools: An image analysis perspective. Skin Res Technol 2018; 25:129-141. [PMID: 30030916 DOI: 10.1111/srt.12622] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 06/23/2018] [Indexed: 11/29/2022]
Abstract
BACKGROUND The paper reviews the advancement of tools and current technologies for the detection of melanoma. We discussed several computational strategies from pre- to postprocessing image operations, descriptors, and popular classifiers to diagnose a suspected skin lesion based on its virtual similarity to the malignant lesion with known histopathology. We reviewed the current state of smart phone-based apps as diagnostic tools for screening. METHODS A literature survey was conducted using a combination of keywords in the bibliographic databases: PubMed, AJCC, PH2, EDRA, and ISIC melanoma project. A number of melanoma detection apps were downloaded for two major mobile operating systems, iOS and Android; their important uses, key challenges, and various expert opinions were evaluated and also discussed. RESULTS We have provided an overview of research on the computer-aided diagnosis methods to estimate melanoma risk and early screening. Dermoscopic images are the most viable option for the advent of new image processing technologies based on which many of the skin cancer detection apps are being developed recently. We have categorized and explored their potential uses, evaluation criteria, limitations, and other details. CONCLUSION Such advancements are helpful in the sense they are raising awareness. Diagnostic accuracy is the major issue of smart phone-based apps and it cannot replace an adequate clinical experience and biopsy procedures.
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Affiliation(s)
- Nivedita Singh
- Department of Bioinformatics, Systems Toxicology Group, CSIR-Indian Institute of Toxicology Research, Lucknow, Uttar Pradesh, India.,Department of Biochemistry, Babu Banarasi Das University, Lucknow, Uttar Pradesh, India
| | - Shailendra K Gupta
- Department of Bioinformatics, Systems Toxicology Group, CSIR-Indian Institute of Toxicology Research, Lucknow, Uttar Pradesh, India.,Department of Systems Biology and Bioinformatics, University of Rostock, Rostock, Germany.,Chhattisgarh Swami Vivekanand Technical University, Bhilai, Chhattisgarh, India
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Guarracino MR, Maddalena L. SDI+: A Novel Algorithm for Segmenting Dermoscopic Images. IEEE J Biomed Health Inform 2018; 23:481-488. [PMID: 29994446 DOI: 10.1109/jbhi.2018.2808970] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Malignant skin lesions are among the most common types of cancer, and automated systems for their early detection are of fundamental importance. We propose SDI+, an unsupervised algorithm for the segmentation of skin lesions in dermoscopic images. It is articulated into three steps, aimed at extracting preliminary information on possible confounding factors, accurately segmenting the lesion, and post-processing the result. The overall method achieves high accuracy on dark skin lesions and can handle several cases where confounding factors could inhibit a clear understanding by a human operator. We present extensive experimental results and comparisons achieved by the SDI+ algorithm on the ISIC 2017 dataset, highlighting the advantages and disadvantages.
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39
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Saez A, Acha B, Serrano A, Serrano C. Statistical Detection of Colors in Dermoscopic Images With a Texton-Based Estimation of Probabilities. IEEE J Biomed Health Inform 2018; 23:560-569. [PMID: 29993674 DOI: 10.1109/jbhi.2018.2823499] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Color has great diagnostic significance in dermatoscopy. Several diagnosis methods are based on the colors detected within a lesion. Malignant lesions frequently show more than three colors, whereas in benign lesions, three or fewer colors are usually observed. Black, red, white, and blue-gray are found more frequently in melanomas than in benign nevi. In this paper, a method to automatically identify the colors of a lesion is presented. A color label identification problem is proposed and solved by maximizing the posterior probability of a pixel to belong to a label, given its color value and the neighborhood color values. The main contribution of this paper is the estimation of the different terms involved in the computation of this probability. Two evaluations are performed on a database of 200 dermoscopic images. The first one evaluates if all the colors detected in a lesion are indeed present in it. The second analyzes if each pixel within a lesion is assigned the correct color label. The results show that the proposed method performs correctly and outperforms other methods, with an average F-measure of 0.89, an accuracy of 0.90, and a Spearman correlation of 0.831.
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Pathan S, Prabhu KG, Siddalingaswamy P. A methodological approach to classify typical and atypical pigment network patterns for melanoma diagnosis. Biomed Signal Process Control 2018. [DOI: 10.1016/j.bspc.2018.03.017] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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41
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Hair detection and lesion segmentation in dermoscopic images using domain knowledge. Med Biol Eng Comput 2018; 56:2051-2065. [DOI: 10.1007/s11517-018-1837-9] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2017] [Accepted: 04/23/2018] [Indexed: 10/16/2022]
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42
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Social Group Optimization Supported Segmentation and Evaluation of Skin Melanoma Images. Symmetry (Basel) 2018. [DOI: 10.3390/sym10020051] [Citation(s) in RCA: 32] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022] Open
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43
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Pathan S, Prabhu KG, Siddalingaswamy P. Techniques and algorithms for computer aided diagnosis of pigmented skin lesions—A review. Biomed Signal Process Control 2018. [DOI: 10.1016/j.bspc.2017.07.010] [Citation(s) in RCA: 65] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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44
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Cayir S, Yetik IS. Hair and bare skin discrimination for laser-assisted hair removal systems. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2017; 2017:604-607. [PMID: 29059945 DOI: 10.1109/embc.2017.8036897] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Laser-assisted hair removal devices aim to remove body hair permanently. In most cases, these devices irradiate the whole area of the skin with a homogenous power density. Thus, a significant portion of the skin, where hair is not present, is burnt unnecessarily causing health risks. Therefore, methods that can distinguish hair regions automatically would be very helpful avoiding these unnecessary applications of laser. This study proposes a new system of algorithms to detect hair regions with the help of a digital camera. Unlike previous limited number of studies, our methods are very fast allowing for real-time application. Proposed methods are based on certain features derived from histograms of hair and skin regions. We compare our algorithm with competing methods in terms of localization performance and computation time and show that a much faster real-time accurate localization of hair regions is possible with the proposed method. Our results show that the algorithm we have developed is extremely fast (around 45 milliseconds) allowing for real-time application with high accuracy hair localization ( 96.48 %).
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45
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Computational methods for pigmented skin lesion classification in images: review and future trends. Neural Comput Appl 2016. [DOI: 10.1007/s00521-016-2482-6] [Citation(s) in RCA: 104] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
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46
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Shojaedini SV. A New fuzzy level set method for lesion border detection in dermoscopy images. HEALTH AND TECHNOLOGY 2016. [DOI: 10.1007/s12553-015-0119-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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47
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Oliveira RB, Filho ME, Ma Z, Papa JP, Pereira AS, Tavares JMRS. Computational methods for the image segmentation of pigmented skin lesions: A review. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2016; 131:127-141. [PMID: 27265054 DOI: 10.1016/j.cmpb.2016.03.032] [Citation(s) in RCA: 86] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/09/2015] [Revised: 03/03/2016] [Accepted: 03/30/2016] [Indexed: 06/05/2023]
Abstract
BACKGROUND AND OBJECTIVES Because skin cancer affects millions of people worldwide, computational methods for the segmentation of pigmented skin lesions in images have been developed in order to assist dermatologists in their diagnosis. This paper aims to present a review of the current methods, and outline a comparative analysis with regards to several of the fundamental steps of image processing, such as image acquisition, pre-processing and segmentation. METHODS Techniques that have been proposed to achieve these tasks were identified and reviewed. As to the image segmentation task, the techniques were classified according to their principle. RESULTS The techniques employed in each step are explained, and their strengths and weaknesses are identified. In addition, several of the reviewed techniques are applied to macroscopic and dermoscopy images in order to exemplify their results. CONCLUSIONS The image segmentation of skin lesions has been addressed successfully in many studies; however, there is a demand for new methodologies in order to improve the efficiency.
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Affiliation(s)
- Roberta B Oliveira
- Instituto de Ciência e Inovação em Engenharia Mecânica e Engenharia Industrial, Departamento de Engenharia Mecânica, Faculdade de Engenharia, Universidade do Porto, rua Dr. Roberto Frias, 4200-465 Porto, Portugal
| | - Mercedes E Filho
- Instituto de Ciência e Inovação em Engenharia Mecânica e Engenharia Industrial, Departamento de Engenharia Mecânica, Faculdade de Engenharia, Universidade do Porto, rua Dr. Roberto Frias, 4200-465 Porto, Portugal
| | - Zhen Ma
- Instituto de Ciência e Inovação em Engenharia Mecânica e Engenharia Industrial, Departamento de Engenharia Mecânica, Faculdade de Engenharia, Universidade do Porto, rua Dr. Roberto Frias, 4200-465 Porto, Portugal
| | - João P Papa
- Departamento de Computação, Faculdade de Ciências, Universidade Estadual Paulista, av. Eng. Luiz Edmundo Carrijo Coube, 14-01, 17033-360 Bauru, SP, Brazil
| | - Aledir S Pereira
- Departamento de Ciências de Computação e Estatística, Instituto de Biociências, Letras e Ciências Exatas, Universidade Estadual Paulista, rua Cristóvão Colombo, 2265, 15054-000 São José do Rio Preto, SP, Brazil
| | - João Manuel R S Tavares
- Instituto de Ciência e Inovação em Engenharia Mecânica e Engenharia Industrial, Departamento de Engenharia Mecânica, Faculdade de Engenharia, Universidade do Porto, rua Dr. Roberto Frias, 4200-465 Porto, Portugal.
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48
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Abuzaghleh O, Barkana BD, Faezipour M. Noninvasive Real-Time Automated Skin Lesion Analysis System for Melanoma Early Detection and Prevention. IEEE JOURNAL OF TRANSLATIONAL ENGINEERING IN HEALTH AND MEDICINE-JTEHM 2015; 3:2900310. [PMID: 27170906 PMCID: PMC4848099 DOI: 10.1109/jtehm.2015.2419612] [Citation(s) in RCA: 103] [Impact Index Per Article: 11.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/08/2014] [Revised: 01/05/2015] [Accepted: 03/21/2015] [Indexed: 11/11/2022]
Abstract
Melanoma spreads through metastasis, and therefore, it has been proved to be very fatal. Statistical evidence has revealed that the majority of deaths resulting from skin cancer are as a result of melanoma. Further investigations have shown that the survival rates in patients depend on the stage of the cancer; early detection and intervention of melanoma implicate higher chances of cure. Clinical diagnosis and prognosis of melanoma are challenging, since the processes are prone to misdiagnosis and inaccuracies due to doctors’ subjectivity. Malignant melanomas are asymmetrical, have irregular borders, notched edges, and color variations, so analyzing the shape, color, and texture of the skin lesion is important for the early detection and prevention of melanoma. This paper proposes the two major components of a noninvasive real-time automated skin lesion analysis system for the early detection and prevention of melanoma. The first component is a real-time alert to help users prevent skinburn caused by sunlight; a novel equation to compute the time for skin to burn is thereby introduced. The second component is an automated image analysis module, which contains image acquisition, hair detection and exclusion, lesion segmentation, feature extraction, and classification. The proposed system uses PH2 Dermoscopy image database from Pedro Hispano Hospital for the development and testing purposes. The image database contains a total of 200 dermoscopy images of lesions, including benign, atypical, and melanoma cases. The experimental results show that the proposed system is efficient, achieving classification of the benign, atypical, and melanoma images with accuracy of 96.3%, 95.7%, and 97.5%, respectively.
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49
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Xie F, Li Y, Meng R, Jiang Z. No-reference hair occlusion assessment for dermoscopy images based on distribution feature. Comput Biol Med 2015; 59:106-115. [PMID: 25701625 DOI: 10.1016/j.compbiomed.2015.01.023] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2014] [Revised: 01/29/2015] [Accepted: 01/30/2015] [Indexed: 10/24/2022]
Abstract
The presence of hair is a common quality problem for dermoscopy images, which may influence the accuracy of lesion analysis. In this paper, a novel no-reference hair occlusion assessment method is proposed according to the distribution feature of hairs in the dermoscopy image. Firstly, the image is adaptively enhanced by simple linear iterative clustering (SLIC) combined with isotropic nonlinear filtering (INF). Then, hairs are extracted from the image by an automatic threshold and meanwhile the postprocessing is used to refine the hair through re-extracting omissive hairs and filtering false hairs. Finally, the degree of hair occlusion is evaluated by an objective metric based on the hair distribution. A series of experiments was carried out on both simulated images and real images. The result shows that the proposed local adaptive hair detection method can work well on both sparse hair and dense hair, and the designed metric can effectively evaluate the degree of hair occlusion.
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Affiliation(s)
- Fengying Xie
- Image Processing Center, School of Astronautics, BeiHang University, Beijing 100191, China.
| | - Yang Li
- Image Processing Center, School of Astronautics, BeiHang University, Beijing 100191, China.
| | - Rusong Meng
- General Hospital of the Air Force, PLA, Beijing 100036, China.
| | - Zhiguo Jiang
- Image Processing Center, School of Astronautics, BeiHang University, Beijing 100191, China.
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50
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Mirzaalian H, Lee TK, Hamarneh G. Hair enhancement in dermoscopic images using dual-channel quaternion tubularness filters and MRF-based multilabel optimization. IEEE TRANSACTIONS ON IMAGE PROCESSING : A PUBLICATION OF THE IEEE SIGNAL PROCESSING SOCIETY 2014; 23:5486-5496. [PMID: 25312927 DOI: 10.1109/tip.2014.2362054] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
Hair occlusion is one of the main challenges facing automatic lesion segmentation and feature extraction for skin cancer applications. We propose a novel method for simultaneously enhancing both light and dark hairs with variable widths, from dermoscopic images, without the prior knowledge of the hair color. We measure hair tubularness using a quaternion color curvature filter. We extract optimal hair features (tubularness, scale, and orientation) using Markov random field theory and multilabel optimization. We also develop a novel dual-channel matched filter to enhance hair pixels in the dermoscopic images while suppressing irrelevant skin pixels. We evaluate the hair enhancement capabilities of our method on hair-occluded images generated via our new hair simulation algorithm. Since hair enhancement is an intermediate step in a computer-aided diagnosis system for analyzing dermoscopic images, we validate our method and compare it to other methods by studying its effect on: 1) hair segmentation accuracy; 2) image inpainting quality; and 3) image classification accuracy. The validation results on 40 real clinical dermoscopic images and 94 synthetic data demonstrate that our approach outperforms competing hair enhancement methods.
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