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Nagahawatte ND, Paskaranandavadivel N, Bear LR, Avci R, Cheng LK. A novel framework for the removal of pacing artifacts from bio-electrical recordings. Comput Biol Med 2023; 155:106673. [PMID: 36805227 DOI: 10.1016/j.compbiomed.2023.106673] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2022] [Revised: 01/23/2023] [Accepted: 02/10/2023] [Indexed: 02/13/2023]
Abstract
BACKGROUND Electroceuticals provide clinical solutions for a range of disorders including Parkinson's disease, cardiac arrythmias and are emerging as a potential treatment option for gastrointestinal disorders. However, pre-clinical investigations are challenged by the large stimulation artifacts registered in bio-electrical recordings. METHOD A generalized framework capable of isolating and suppressing stimulation artifacts with minimal intervention was developed. Stimulation artifacts with different pulse-parameters in synthetic and experimental cardiac and gastrointestinal signals were detected using a Hampel filter and reconstructed using 3 methods: i) autoregression, ii) weighted mean, and iii) linear interpolation. RESULTS Synthetic stimulation artifacts with amplitudes of 2 mV and 4 mV and pulse-widths of 50 ms, 100 ms, and 200 ms were successfully isolated and the artifact window size remained uninfluenced by the pulse-amplitude, but was influenced by pulse-width (e.g., the autoregression method resulted in an identical Root Mean Square Error (RMSE) of 1.64 mV for artifacts with 200 ms pulse-width and both 2 mV and 4 mV amplitudes). The performance of autoregression (RMSE = 1.45 ± 0.16 mV) and linear interpolation (RMSE = 1.22 ± 0.14 mV) methods were comparable and better than weighted mean (RMSE = 5.54 ± 0.56 mV) for synthetic data. However, for experimental recordings, artifact removal by autoregression was superior to both linear interpolation and weighted mean approaches in gastric, small intestinal and cardiac recordings. CONCLUSIONS A novel signal processing framework enabled efficient analysis of bio-electrical recordings with stimulation artifacts. This will allow the bio-electrical events induced by stimulation protocols to be efficiently and systematically evaluated, resulting in improved stimulation therapies.
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Affiliation(s)
- Nipuni D Nagahawatte
- Auckland Bioengineering Institute, University of Auckland, Auckland, New Zealand
| | | | - Laura R Bear
- IHU Liryc, Fondation Bordeaux Université, F-33600, Pessac-Bordeaux, France; INSERM, Centre de recherche Cardio-Thoracique de Bordeaux, U1045, F-33000, Bordeaux, France; Université de Bordeaux, CRCTB, U1045, F-33000, Bordeaux, France
| | - Recep Avci
- Auckland Bioengineering Institute, University of Auckland, Auckland, New Zealand
| | - Leo K Cheng
- Auckland Bioengineering Institute, University of Auckland, Auckland, New Zealand; Department of Surgery, Vanderbilt University, Nashville, TN, USA; Riddet Institute Centre of Research Excellence, Palmerston North, New Zealand.
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2
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William L, Dali M, Azevedo Coste C, Guiraud D. A method based on wavelets to analyse overlapped and dependant M-Waves. J Electromyogr Kinesiol 2022; 63:102646. [DOI: 10.1016/j.jelekin.2022.102646] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2021] [Revised: 12/17/2021] [Accepted: 02/15/2022] [Indexed: 11/26/2022] Open
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A Neural Recording and Stimulation Chip with Artifact Suppression for Biomedical Devices. JOURNAL OF HEALTHCARE ENGINEERING 2021; 2021:4153155. [PMID: 34484653 PMCID: PMC8416399 DOI: 10.1155/2021/4153155] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/24/2021] [Accepted: 08/18/2021] [Indexed: 11/30/2022]
Abstract
This paper presents chip implementation of the integrated neural recording and stimulation system with stimulation-induced artifact suppression. The implemented chip consists of low-power neural recording circuits, stimulation circuits, and action potential detection circuits. These circuits constitute a closed-loop simultaneous neural recording and stimulation system for biomedical devices, and a proposed artifact suppression technique is used in the system. Moreover, this paper also presents the measurement and experiment results of the implemented 4-to-4 channel neural recording and stimulation chip with 0.18 µm CMOS technology. The function and efficacy of simultaneous neural recording and stimulation is validated in both in vivo and animal experiments.
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Li J, Liu X, Mao W, Chen T, Yu H. Advances in Neural Recording and Stimulation Integrated Circuits. Front Neurosci 2021; 15:663204. [PMID: 34421507 PMCID: PMC8377741 DOI: 10.3389/fnins.2021.663204] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2021] [Accepted: 07/08/2021] [Indexed: 11/13/2022] Open
Abstract
In the past few decades, driven by the increasing demands in the biomedical field aiming to cure neurological diseases and improve the quality of daily lives of the patients, researchers began to take advantage of the semiconductor technology to develop miniaturized and power-efficient chips for implantable applications. The emergence of the integrated circuits for neural prosthesis improves the treatment process of epilepsy, hearing loss, retinal damage, and other neurological diseases, which brings benefits to many patients. However, considering the safety and accuracy in the neural prosthesis process, there are many research directions. In the process of chip design, designers need to carefully analyze various parameters, and investigate different design techniques. This article presents the advances in neural recording and stimulation integrated circuits, including (1) a brief introduction of the basics of neural prosthesis circuits and the repair process in the bionic neural link, (2) a systematic introduction of the basic architecture and the latest technology of neural recording and stimulation integrated circuits, (3) a summary of the key issues of neural recording and stimulation integrated circuits, and (4) a discussion about the considerations of neural recording and stimulation circuit architecture selection and a discussion of future trends. The overview would help the designers to understand the latest performances in many aspects and to meet the design requirements better.
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Affiliation(s)
- Juzhe Li
- College of Microelectronics, Beijing University of Technology, Beijing, China
| | - Xu Liu
- College of Microelectronics, Beijing University of Technology, Beijing, China
| | - Wei Mao
- School of Microelectronics, Southern University of Science and Technology, Shenzhen, China
| | - Tao Chen
- Advanced Photonics Institute, Beijing University of Technology, Beijing, China
| | - Hao Yu
- School of Microelectronics, Southern University of Science and Technology, Shenzhen, China
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Kim M, Moon Y, Hunt J, McKenzie KA, Horin A, McGuire M, Kim K, Hargrove LJ, Jayaraman A. A Novel Technique to Reject Artifact Components for Surface EMG Signals Recorded During Walking With Transcutaneous Spinal Cord Stimulation: A Pilot Study. Front Hum Neurosci 2021; 15:660583. [PMID: 34149379 PMCID: PMC8209256 DOI: 10.3389/fnhum.2021.660583] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2021] [Accepted: 05/06/2021] [Indexed: 11/13/2022] Open
Abstract
Transcutaneous spinal cord electrical stimulation (tSCS) is an emerging technology that targets to restore functionally integrated neuromuscular control of gait. The purpose of this study was to demonstrate a novel filtering method, Artifact Component Specific Rejection (ACSR), for removing artifacts induced by tSCS from surface electromyogram (sEMG) data for investigation of muscle response during walking when applying spinal stimulation. Both simulated and real tSCS contaminated sEMG data from six stroke survivors were processed using ACSR and notch filtering, respectively. The performance of the filters was evaluated with data collected in various conditions (e.g., simulated artifacts contaminating sEMG in multiple degrees, various tSCS intensities in five lower-limb muscles of six participants). In the simulation test, after applying the ACSR filter, the contaminated-signal was well matched with the original signal, showing a high correlation (r = 0.959) and low amplitude difference (normalized root means square error = 0.266) between them. In the real tSCS contaminated data, the ACSR filter showed superior performance on reducing the artifacts (96% decrease) over the notch filter (25% decrease). These results indicate that ACSR filtering is capable of eliminating artifacts from sEMG collected during tSCS application, improving the precision of quantitative analysis of muscle activity.
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Affiliation(s)
- Minjae Kim
- Shirley Ryan AbilityLab, Chicago, IL, United States.,Feinberg School of Medicine, Northwestern University, Chicago, IL, United States.,Interaction and Robotics Research Center, Korea Institute of Science and Technology (KIST), Seoul, South Korea
| | - Yaejin Moon
- Shirley Ryan AbilityLab, Chicago, IL, United States.,Feinberg School of Medicine, Northwestern University, Chicago, IL, United States
| | - Jasmine Hunt
- Shirley Ryan AbilityLab, Chicago, IL, United States
| | | | - Adam Horin
- Shirley Ryan AbilityLab, Chicago, IL, United States.,Feinberg School of Medicine, Northwestern University, Chicago, IL, United States
| | - Matt McGuire
- Shirley Ryan AbilityLab, Chicago, IL, United States
| | - Keehoon Kim
- Department of Mechanical Engineering, Pohang University of Science and Technology, Pohang, South Korea
| | - Levi J Hargrove
- Shirley Ryan AbilityLab, Chicago, IL, United States.,Feinberg School of Medicine, Northwestern University, Chicago, IL, United States
| | - Arun Jayaraman
- Shirley Ryan AbilityLab, Chicago, IL, United States.,Feinberg School of Medicine, Northwestern University, Chicago, IL, United States
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Bi ZY, Zhou YX, Xie CX, Wang HP, Wang HX, Wang BL, Huang J, Lü XY, Wang ZG. A hybrid method for real-time stimulation artefact removal during functional electrical stimulation with time-variant parameters. J Neural Eng 2021; 18. [PMID: 33836509 DOI: 10.1088/1741-2552/abf68c] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2020] [Accepted: 04/09/2021] [Indexed: 02/02/2023]
Abstract
Objective. In this study, a hybrid method combining hardware and software architecture is proposed to remove stimulation artefacts (SAs) and extract the volitional surface electromyography (sEMG) in real time during functional electrical stimulations (FES) with time-variant parameters.Approach. First, an sEMG detection front-end (DFE) combining fast recovery, detector and stimulator isolation and blanking is developed and is capable of preventing DFE saturation with a blanking time of 7.6 ms. The fragment between the present stimulus and previous stimulus is set as an SA fragment. Second, an SA database is established to provide six high-similarity templates with the current SA fragment. The SA fragment will be de-artefacted by a 6th-order Gram-Schmidt (GS) algorithm, a template-subtracting method, using the provided templates, and this database-based GS algorithm is called DBGS. The provided templates are previously collected SA fragments with the same or a similar evoking FES intensity to that of the current SA fragment, and the lengths of the templates are longer than that of the current SA fragment. After denoising, the sEMG will be extracted, and the current SA fragment will be added to the SA database. The prototype system based on DBGS was tested on eight able-bodied volunteers and three individuals with stroke to verify its capacity for stimulation removal and sEMG extraction.Results.The average stimulus artefact attenuation factor, SA index and correlation coefficient between clean sEMG and extracted sEMG for 6th-order DBGS were 12.77 ± 0.85 dB, 1.82 ± 0.37 dB and 0.84 ± 0.33 dB, respectively, which were significantly higher than those for empirical mode decomposition combined with notch filters, pulse-triggered GS algorithm, 1st-order and 3rd-order DBGS. The sEMG-torque correlation coefficients were 0.78 ± 0.05 and 0.48 ± 0.11 for able-bodied volunteers and individuals with stroke, respectively.Significance.The proposed hybrid method can extract sEMG during dynamic FES in real time.
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Affiliation(s)
- Zheng-Yang Bi
- State Key Lab of Bioelectronics, Southeast University, Nanjing 210096, People's Republic of China
| | - Yu-Xuan Zhou
- School of Biomedical Engineering and Informatics, Nanjing Medical University, Nanjing 210009, People's Republic of China
| | - Chen-Xi Xie
- State Key Lab of Bioelectronics, Southeast University, Nanjing 210096, People's Republic of China
| | - Hai-Peng Wang
- Institute of RF- and OE-ICs, Southeast University, Nanjing 210096, People's Republic of China
| | - Hong-Xing Wang
- Department of Rehabilitation Medicine, Zhongda Hospital, Nanjing 210096, People's Republic of China
| | - Bi-Lei Wang
- Department of Rehabilitation Medicine, Zhongda Hospital, Nanjing 210096, People's Republic of China
| | - Jia Huang
- Department of Rehabilitation Medicine, Zhongda Hospital, Nanjing 210096, People's Republic of China
| | - Xiao-Ying Lü
- State Key Lab of Bioelectronics, Southeast University, Nanjing 210096, People's Republic of China.,Co-innovation Center of Neuroregeneration, Nantong University, Nantong 226001, People's Republic of China
| | - Zhi-Gong Wang
- Institute of RF- and OE-ICs, Southeast University, Nanjing 210096, People's Republic of China.,Co-innovation Center of Neuroregeneration, Nantong University, Nantong 226001, People's Republic of China
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Zhou Y, Bi Z, Ji M, Chen S, Wang W, Wang K, Hu B, Lu X, Wang Z. A Data-Driven Volitional EMG Extraction Algorithm During Functional Electrical Stimulation With Time Variant Parameters. IEEE Trans Neural Syst Rehabil Eng 2020; 28:1069-1080. [DOI: 10.1109/tnsre.2020.2980294] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Li Y, Chen J, Yang Y. A Method for Suppressing Electrical Stimulation Artifacts from Electromyography. Int J Neural Syst 2019; 29:1850054. [DOI: 10.1142/s0129065718500545] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
When surface electromyography (EMG) signal is used in a real-time functional electrical stimulation (FES) system for feedback control, the artifact from electrical stimulation is a key challenge for EMG signal processing. To address this challenge, this study proposes a novel method to suppress stimulation artifacts in the EMG-driven closed-loop FES system. The proposed method is inspired by an experimental study that compares artifacts generated by electrical stimulations with different current intensities. It is found that (1) spikes of stimulation artifacts are susceptible to the current intensity and (2) tailing components are similar under different current intensities. Based on these observations, the proposed method combines the blanking and template subtracting strategies for suppressing stimulation artifact. The length of blanking window for suppressing the stimulation spike is adaptively determined by a spike detection algorithm and the first-order derivative analysis of signal. An autoregressive model is used to estimate the tailing part of stimulation artifact, which is an adaptive template for subtracting the artifact. The proposed method is evaluated on both semi-synthetic and experimental datasets. Verified on the semi-synthetic dataset, the proposed method achieves better performance than the classic blanking method. Validated on the experimental dataset, the proposed method substantially decreases the power of stimulation artifact in the EMG. These results indicate that the proposed method can effectively suppress the stimulation artifact while retains the useful EMG signal for an EMG-driven FES system.
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Affiliation(s)
- Yurong Li
- College of Electrical Engineering and Automation, Fuzhou University, Fuzhou, Fujian 350116, P. R. China
- Fujian Key Lab of Medical Instrumentation and Pharmaceutical Technology, Fuzhou, Fujian 350116, P. R. China
| | - Jun Chen
- College of Electrical Engineering and Automation, Fuzhou University, Fuzhou, Fujian 350116, P. R. China
- Fujian Key Lab of Medical Instrumentation and Pharmaceutical Technology, Fuzhou, Fujian 350116, P. R. China
| | - Yuan Yang
- College of Electrical Engineering and Automation, Fuzhou University, Fuzhou, Fujian 350116, P. R. China
- Fujian Key Lab of Medical Instrumentation and Pharmaceutical Technology, Fuzhou, Fujian 350116, P. R. China
- Department of Physical Therapy and Human Movement Sciences, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA
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Culaclii S, Kim B, Lo YK, Li L, Liu W. Online Artifact Cancelation in Same-Electrode Neural Stimulation and Recording Using a Combined Hardware and Software Architecture. IEEE TRANSACTIONS ON BIOMEDICAL CIRCUITS AND SYSTEMS 2018; 12:601-613. [PMID: 29877823 PMCID: PMC6299268 DOI: 10.1109/tbcas.2018.2816464] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/14/2023]
Abstract
Advancing studies of neural network dynamics and developments of closed-loop neural interfaces requires the ability to simultaneously stimulate and record the neural cells. Recording adjacent to or at the stimulation site produces artifact signals that are orders of magnitude larger than the neural responses of interest. These signals often saturate the recording amplifier causing distortion or loss of short-latency evoked responses. This paper proposes a method to cancel the artifact in simultaneous neural recording and stimulation on the same electrode. By combining a novel hardware architecture with concurrent software processing, the design achieves neural signal recovery in a wide range of conditions. The proposed system uniquely demonstrates same-electrode stimulation and recording, with neural signal recovery in presence of stimulation artifact 100 dB larger in magnitude than the underlying signals. The system is tested both in vitro and in vivo, during concurrent stimulation and recording on the same electrode. In vivo results in a rodent model are compared to recordings made by a commercial neural amplifier system connected in parallel.
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Application of Empirical Mode Decomposition Combined With Notch Filtering for Interpretation of Surface Electromyograms During Functional Electrical Stimulation. IEEE Trans Neural Syst Rehabil Eng 2017; 25:1268-1277. [DOI: 10.1109/tnsre.2016.2624763] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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11
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Culaclii S, Kim B. A hybrid hardware and software approach for cancelling stimulus artifacts during same-electrode neural stimulation and recording. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2017; 2016:6190-6193. [PMID: 28269665 DOI: 10.1109/embc.2016.7592142] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
Recovering neural responses from electrode recordings is fundamental for understanding the dynamics of neural networks. This effort is often obscured by stimulus artifacts in the recordings, which result from stimuli injected into the electrode-tissue interface. Stimulus artifacts, which can be orders of magnitude larger than the neural responses of interest, can mask short-latency evoked responses. Furthermore, simultaneous neural stimulation and recording on the same electrode generates artifacts with larger amplitudes compared to a separate electrode setup, which inevitably overwhelm the amplifier operation and cause unrecoverable neural signal loss. This paper proposes an end-to-end system combining hardware and software techniques for actively cancelling stimulus artifacts, avoiding amplifier saturation, and recovering neural responses during current-controlled in-vivo neural stimulation and recording. The proposed system is tested in-vitro under various stimulation settings by stimulating and recording on the same electrode with a superimposed pre-recorded neural signal. Experimental results show that neural responses can be recovered with minimal distortion even during stimulus artifacts that are several orders greater in magnitude.
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12
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Characterization of cochlear implant artifacts in electrically evoked auditory steady-state responses. Biomed Signal Process Control 2017. [DOI: 10.1016/j.bspc.2016.07.013] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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