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Bose A, Pathak T. Vinyl sulfone-modified carbohydrates: Michael acceptors and 2π partners for the synthesis of functionalized sugars and enantiomerically pure carbocycles and heterocycles. Adv Carbohydr Chem Biochem 2021; 78:1-134. [PMID: 33276909 DOI: 10.1016/bs.accb.2020.10.001] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
Increasing demands for molecules with skeletal complexity, including those of stereochemical diversity, require new synthetic strategies. Carbohydrates have been used extensively as chiral building blocks for the synthesis of various complex molecules. On the other hand, the vinyl sulfone group has been identified as a unique functional group, which acts either as a Michael acceptor or a 2π partner in cycloaddition reactions. A combination of the high reactivity of the vinyl sulfone group and the in-built chiralities of carbohydrates has the potential to function as a powerful tool to generate a wide variety of enantiomerically pure reactive intermediates. Since CS bond formation in carbohydrates is easily achieved with regioselectivity, further synthetic manipulations of these thiosugars has led to the generation of a wide range of vinyl sulfone-modified furanosyl, pyranosyl, acyclic, and bicyclic carbohydrates. Several approaches have been studied to standardize the preparative methods for accessing vinyl sulfone-modified carbohydrates at least on a gram scale. Reactions of these modified carbohydrates with appropriate reagents afford a large number of new chemical entities primarily via (i) Michael addition reactions, (ii) desulfostannylation, (iii) Michael-initiated ring-closure reactions, and (iv) cycloaddition reactions. A wide range of desulfonylating reagents in the context of sensitive molecules such as carbohydrates have also been extensively studied. Applications of these strategies have led to the synthesis of (a) amino sugars and branched-chain sugars, (b) C-glycosides, (c) enantiomerically pure cyclopropanes, five- and six-membered carbocycles, (d) saturated oxa-, aza-, and thio-monocyclic heterocycles, (e) bi-and tricyclic saturated oxa and aza heterocycles, (f) enantiomerically pure and trisubstituted pyrroles, (g) 1,5-disubstituted 1,2,3-triazolylated carbohydrates and the corresponding triazole-linked di- and trisaccharides, (h) divinyl sulfone-modified carbohydrates and densely functionalized S,S-dioxothiomorpholines, and (i) modified nucleosides. Details of reaction conditions were incorporated as much as possible and mechanistic discussions were included wherever necessary.
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Affiliation(s)
- Amitabha Bose
- Department of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal, India
| | - Tanmaya Pathak
- Department of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal, India.
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2
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Das A, Bhaumik A, Pathak T. Epoxides of d-fructose and l-sorbose: A convenient class of "click" functionality for the synthesis of a rare family of amino- and thio-sugars. Carbohydr Res 2019; 487:107870. [PMID: 31783289 DOI: 10.1016/j.carres.2019.107870] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2019] [Revised: 11/06/2019] [Accepted: 11/06/2019] [Indexed: 12/28/2022]
Abstract
The strained epoxide ring of oxirane-derived furanoside and pyranoside of d-fructose are regioselectively opened by various primary and secondary amines as well as azide to yield C4-alkylamino-C4-deoxy and the corresponding azido derivatives. The epoxide ring of a furanoside derived from l-sorbose, a C-5 epimer of d-fructose also afforded C4-amino and C4-azido analogues. All three epoxides generated piperazine linked disaccharides. These epoxides are also easily opened by p-tolylthiol to access thiosugars. One such thiosugar was converted to vinylsulfone-modified fructofuranoside and subjected to nucleophillic addition. A suitably designed vinyl sulfone-modified fructofuranoside having a leaving group at C-6, act as an efficient substrate for MIRC (Michael Initiated Ring Closure) reactions to construct cyclopropane skeleton in d-fructose. The strategy is general in nature and provides an easy access to cyclopropanated sugar derivatives. Thus, the easily accessible "spring loaded" epoxides of d-fructose and l-sorbose have been used as pivotal starting point for the synthesis of hitherto unknown modified carbohydrates.
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Affiliation(s)
- Ashrukana Das
- Department of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur, 721 302, West Bengal, India
| | - Atanu Bhaumik
- Department of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur, 721 302, West Bengal, India
| | - Tanmaya Pathak
- Department of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur, 721 302, West Bengal, India.
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3
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Castellanos A, Osante I, Fernández J, Fernández de la Pradilla R, Viso A. Oxidative reactions of sulfinyl dienes as an entry to functionalized carbohydrate-like products and furans. Tetrahedron 2019. [DOI: 10.1016/j.tet.2019.04.014] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
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4
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Lin P, Nie XL, Yin ZP, Li ZC, Liu J, Shang-Guan XC, Peng DY. Crystal structure of 6-(2-bromoacetamido)tetrahydro-2 H-pyran-2,3,4,5-Tetrayl tetraacetate, C 16H 22BrNO 10. Z KRIST-NEW CRYST ST 2018. [DOI: 10.1515/ncrs-2018-0158] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Abstract
[C16H22BrNO10], orthorhombic, P212121 (no. 19), a = 9.7453(13) Å, b = 9.9023(13) Å, c = 21.885(3) Å, V = 2111.9(5) Å3, Z = 4, R
gt(F) = 0.0357, wR
ref(F
2) = 0.0981, T = 296(2) K.
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Affiliation(s)
- Ping Lin
- Key Laboratory of Natural Product Research and Development/Agro-processing and Safety Control Engineering Laboratory/College of Food Science and Engineering , Jiangxi Agricultural University , Nanchang 330045 , P.R. China
| | - Xu-Liang Nie
- College of Sciences , Jiangxi Agricultural University , Nanchang 330045 , P.R. China
| | - Zhong-Ping Yin
- Key Laboratory of Natural Product Research and Development/Agro-processing and Safety Control Engineering Laboratory/College of Food Science and Engineering , Jiangxi Agricultural University , Nanchang 330045 , P.R. China
| | - Zhong-Chao Li
- Jiangsu Jialong Chemical Co Ltd , lianyugang 220002 , P.R. China
| | - Jia Liu
- Key Laboratory of Natural Product Research and Development/Agro-processing and Safety Control Engineering Laboratory/College of Food Science and Engineering , Jiangxi Agricultural University , Nanchang 330045 , P.R. China
| | - Xin-Chen Shang-Guan
- Key Laboratory of Natural Product Research and Development/Agro-processing and Safety Control Engineering Laboratory/College of Food Science and Engineering , Jiangxi Agricultural University , Nanchang 330045 , P.R. China
| | - Da-Yong Peng
- Collaborative Innovation Center of Jiangxi Typical, Trees Cultivation and Utilization/Key Laboratory of Natural Product, Research and Development/College of Sciences , Jiangxi Agricultural University , Nanchang 330045 , P.R. China
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5
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Laurent V, Darii E, Aujon A, Debacker M, Petit JL, Hélaine V, Liptaj T, Breza M, Mariage A, Nauton L, Traïkia M, Salanoubat M, Lemaire M, Guérard-Hélaine C, de Berardinis V. Synthesis of Branched-Chain Sugars with a DHAP-Dependent Aldolase: Ketones are Electrophile Substrates of Rhamnulose-1-phosphate Aldolases. Angew Chem Int Ed Engl 2018. [PMID: 29542859 DOI: 10.1002/anie.201712851] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
Dihydroxyacetone phosphate (DHAP)-dependent rhamnulose aldolases display an unprecedented versatility for ketones as electrophile substrates. We selected and characterized a rhamnulose aldolase from Bacteroides thetaiotaomicron (RhuABthet) to provide a proof of concept. DHAP was added as a nucleophile to several α-hydroxylated ketones used as electrophiles. This aldol addition was stereoselective and produced branched-chain monosaccharide adducts with a tertiary alcohol moiety. Several aldols were readily obtained in good to excellent yields (from 76 to 95 %). These results contradict the general view that aldehydes are the only electrophile substrates for DHAP-dependent aldolases and provide a new C-C bond-forming enzyme for stereoselective synthesis of tertiary alcohols.
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Affiliation(s)
- Victor Laurent
- Université Clermont Auvergne, CNRS, SIGMA Clermont, Institut de Chimie de Clermont-Ferrand, 63000, Clermont-Ferrand, France
| | - Ekaterina Darii
- Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Univ Paris-Saclay, 91057, Evry, France
| | - Angelina Aujon
- Université Clermont Auvergne, CNRS, SIGMA Clermont, Institut de Chimie de Clermont-Ferrand, 63000, Clermont-Ferrand, France
| | - Marine Debacker
- Université Clermont Auvergne, CNRS, SIGMA Clermont, Institut de Chimie de Clermont-Ferrand, 63000, Clermont-Ferrand, France
| | - Jean-Louis Petit
- Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Univ Paris-Saclay, 91057, Evry, France
| | - Virgil Hélaine
- Université Clermont Auvergne, CNRS, SIGMA Clermont, Institut de Chimie de Clermont-Ferrand, 63000, Clermont-Ferrand, France
| | - Tibor Liptaj
- Slovak University of Technology, Faculty of Chemical and Food Technology, Radlinského 9, 81237, Bratislava, Slovakia
| | - Martin Breza
- Slovak University of Technology, Faculty of Chemical and Food Technology, Radlinského 9, 81237, Bratislava, Slovakia
| | - Aline Mariage
- Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Univ Paris-Saclay, 91057, Evry, France
| | - Lionel Nauton
- Université Clermont Auvergne, CNRS, SIGMA Clermont, Institut de Chimie de Clermont-Ferrand, 63000, Clermont-Ferrand, France
| | - Mounir Traïkia
- Université Clermont Auvergne, CNRS, SIGMA Clermont, Institut de Chimie de Clermont-Ferrand, 63000, Clermont-Ferrand, France
| | - Marcel Salanoubat
- Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Univ Paris-Saclay, 91057, Evry, France
| | - Marielle Lemaire
- Université Clermont Auvergne, CNRS, SIGMA Clermont, Institut de Chimie de Clermont-Ferrand, 63000, Clermont-Ferrand, France
| | - Christine Guérard-Hélaine
- Université Clermont Auvergne, CNRS, SIGMA Clermont, Institut de Chimie de Clermont-Ferrand, 63000, Clermont-Ferrand, France
| | - Véronique de Berardinis
- Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Univ Paris-Saclay, 91057, Evry, France
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6
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Laurent V, Darii E, Aujon A, Debacker M, Petit JL, Hélaine V, Liptaj T, Breza M, Mariage A, Nauton L, Traïkia M, Salanoubat M, Lemaire M, Guérard-Hélaine C, de Berardinis V. Synthesis of Branched-Chain Sugars with a DHAP-Dependent Aldolase: Ketones are Electrophile Substrates of Rhamnulose-1-phosphate Aldolases. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201712851] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Affiliation(s)
- Victor Laurent
- Université Clermont Auvergne, CNRS, SIGMA Clermont; Institut de Chimie de Clermont-Ferrand; 63000 Clermont-Ferrand France
| | - Ekaterina Darii
- Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry; Univ Paris-Saclay; 91057 Evry France
| | - Angelina Aujon
- Université Clermont Auvergne, CNRS, SIGMA Clermont; Institut de Chimie de Clermont-Ferrand; 63000 Clermont-Ferrand France
| | - Marine Debacker
- Université Clermont Auvergne, CNRS, SIGMA Clermont; Institut de Chimie de Clermont-Ferrand; 63000 Clermont-Ferrand France
| | - Jean-Louis Petit
- Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry; Univ Paris-Saclay; 91057 Evry France
| | - Virgil Hélaine
- Université Clermont Auvergne, CNRS, SIGMA Clermont; Institut de Chimie de Clermont-Ferrand; 63000 Clermont-Ferrand France
| | - Tibor Liptaj
- Slovak University of Technology; Faculty of Chemical and Food Technology; Radlinského 9 81237 Bratislava Slovakia
| | - Martin Breza
- Slovak University of Technology; Faculty of Chemical and Food Technology; Radlinského 9 81237 Bratislava Slovakia
| | - Aline Mariage
- Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry; Univ Paris-Saclay; 91057 Evry France
| | - Lionel Nauton
- Université Clermont Auvergne, CNRS, SIGMA Clermont; Institut de Chimie de Clermont-Ferrand; 63000 Clermont-Ferrand France
| | - Mounir Traïkia
- Université Clermont Auvergne, CNRS, SIGMA Clermont; Institut de Chimie de Clermont-Ferrand; 63000 Clermont-Ferrand France
| | - Marcel Salanoubat
- Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry; Univ Paris-Saclay; 91057 Evry France
| | - Marielle Lemaire
- Université Clermont Auvergne, CNRS, SIGMA Clermont; Institut de Chimie de Clermont-Ferrand; 63000 Clermont-Ferrand France
| | - Christine Guérard-Hélaine
- Université Clermont Auvergne, CNRS, SIGMA Clermont; Institut de Chimie de Clermont-Ferrand; 63000 Clermont-Ferrand France
| | - Véronique de Berardinis
- Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry; Univ Paris-Saclay; 91057 Evry France
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Bhaumik A, Das A, Pathak T. Vinyl Selenones Derived fromd-Fructose: A New Platform for Fructochemistry. ASIAN J ORG CHEM 2016. [DOI: 10.1002/ajoc.201600183] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Atanu Bhaumik
- Department of Chemistry; Indian Institute of Technology Kharagpur; Kharagpur 721302 India
| | - Ashrukana Das
- Department of Chemistry; Indian Institute of Technology Kharagpur; Kharagpur 721302 India
| | - Tanmaya Pathak
- Department of Chemistry; Indian Institute of Technology Kharagpur; Kharagpur 721302 India
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8
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Enantiopure Trisubstituted Tetrahydrofurans with Appendage Diversity: Vinyl Sulfone- and Vinyl Sulfoxide-Modified Furans Derived from Carbohydrates as Synthons for Diversity Oriented Synthesis. Molecules 2016; 21:molecules21060690. [PMID: 27240328 PMCID: PMC6274046 DOI: 10.3390/molecules21060690] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2016] [Revised: 05/12/2016] [Accepted: 05/19/2016] [Indexed: 11/17/2022] Open
Abstract
Enantiomerically pure 2-substituted-2,5-dihydro-3-(aryl) sulfonyl/sulfinyl furans have been prepared from the easily accessible carbohydrate derivatives. The orientation of the substituents attached at the C-2 position of furans is sufficient to control the diastereoselectivity of the addition of various nucleophiles to the vinyl sulfone/sulfoxide-modified tetrahydrofurans, irrespective of the size of the group. The orientation of the substituents at the C-2 center also suppresses the influence of sulfoxides on the diastereoselectivity of the addition of various nucleophiles. The strategy leads to the creation of appendage diversity, affording a plethora of enantiomerically pure trisubstituted furanics for the first time.
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9
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A metal free aqueous route to 1,5-disubstituted 1,2,3-triazolylated monofuranosides and difuranosides. Tetrahedron Lett 2015. [DOI: 10.1016/j.tetlet.2015.08.030] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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10
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Bhaumik A, Pal TK, Pathak T. 1,1-Dioxothiomorpholines with asymmetric environments: protecting group directed diastereoselectivity of glyco divinyl sulfone cyclization. RSC Adv 2015. [DOI: 10.1039/c5ra03276h] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Formation of 1,1-dioxothiomorpholines from divinyl sulfone-modified pyranosides dramatically varied when benzylidene protection is replaced by benzyl protecting groups.
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Affiliation(s)
- Atanu Bhaumik
- Department of Chemistry
- Indian Institute of Technology Kharagpur
- Kharagpur 721302
- India
| | - Tarun Kumar Pal
- Department of Chemistry
- Indian Institute of Technology Kharagpur
- Kharagpur 721302
- India
| | - Tanmaya Pathak
- Department of Chemistry
- Indian Institute of Technology Kharagpur
- Kharagpur 721302
- India
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11
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Manna C, Sahu D, Ganguly B, Pathak T. Furo[2,3-c]pyrans from a Vinyl Sulfone Modified Methyl 2,6-O-Anhydro-α-D-hexopyranoside: An Experimental and Theoretical Investigation. European J Org Chem 2013. [DOI: 10.1002/ejoc.201300935] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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12
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Dey D, Bhaumik A, Pathak T. Vinyl sulfone- and vinyl sulfoxide-modified tetrahydrofurans: a preliminary account of the enantiomeric synthesis of and diastereoselectivity of addition to new classes of Michael acceptors. Tetrahedron 2013. [DOI: 10.1016/j.tet.2013.07.093] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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13
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Kayet A, Pathak T. 1,5-Disubstituted 1,2,3-Triazolylation at C1, C2, C3, C4, and C6 of Pyranosides: A Metal-Free Route to Triazolylated Monosaccharides and Triazole-Linked Disaccharides. J Org Chem 2013; 78:9865-75. [DOI: 10.1021/jo401576n] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Anirban Kayet
- Department
of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur 721 302, India
| | - Tanmaya Pathak
- Department
of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur 721 302, India
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14
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Mukherjee A, Jayaraman N. 2,3-Unsaturated enoses. A Pummerer rearrangement route to sugar vinyl sulfides and synthesis of 3-deoxy-3-alkyl/arylsulfinyl pyranosides. Tetrahedron 2012. [DOI: 10.1016/j.tet.2012.08.011] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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15
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Atta AK, Dey D, Bhaumik A, Manna C, Pal TK, Pathak T. Synthesis of Vinyl Sulfoxide-Modified Pent-2-enofuranosides and Hex-2-enopyranosides and Preliminary Studies of Their Reactivity. European J Org Chem 2012. [DOI: 10.1002/ejoc.201200637] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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16
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Lopez-Jaramillo FJ, Ortega-Muñoz M, Megia-Fernandez A, Hernandez-Mateo F, Santoyo-Gonzalez F. Vinyl Sulfone Functionalization: A Feasible Approach for the Study of the Lectin–Carbohydrate Interactions. Bioconjug Chem 2012; 23:846-55. [DOI: 10.1021/bc200681c] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Affiliation(s)
- Francisco Javier Lopez-Jaramillo
- Departamento de Química
Orgánica, Instituto de Biotecnología, Facultad de Ciencias, Universidad de Granada, 18071 Granada, Spain
| | - Mariano Ortega-Muñoz
- Departamento de Química
Orgánica, Instituto de Biotecnología, Facultad de Ciencias, Universidad de Granada, 18071 Granada, Spain
| | | | - Fernando Hernandez-Mateo
- Departamento de Química
Orgánica, Instituto de Biotecnología, Facultad de Ciencias, Universidad de Granada, 18071 Granada, Spain
| | - Francisco Santoyo-Gonzalez
- Departamento de Química
Orgánica, Instituto de Biotecnología, Facultad de Ciencias, Universidad de Granada, 18071 Granada, Spain
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Zhang F, Liu H, Sheng Y, Liu H. Synthesis of 2,2-Bis-C-functionalized Chain Glucosid-3-ketals. CHINESE J CHEM 2011. [DOI: 10.1002/cjoc.201180431] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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18
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Pal TK, Dey S, Pathak T. A General Route to Mono- and Disubstituted Divinyl Sulfones: Acyclic Michael Acceptors for the Synthesis of Polyfunctionalized Cyclic Sulfones. J Org Chem 2011; 76:3034-41. [DOI: 10.1021/jo101877r] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Tarun Kumar Pal
- Department of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur 721 302, India
| | - Santu Dey
- Department of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur 721 302, India
| | - Tanmaya Pathak
- Department of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur 721 302, India
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Pathak T, Bhattacharya R. An insight into our research on vinyl sulfone-modified pyranosides and furanosides. CR CHIM 2011. [DOI: 10.1016/j.crci.2010.06.018] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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20
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Cheng F, Shang J, Ratner DM. A versatile method for functionalizing surfaces with bioactive glycans. Bioconjug Chem 2011; 22:50-7. [PMID: 21142056 PMCID: PMC3025665 DOI: 10.1021/bc1003372] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
Microarrays and biosensors owe their functionality to our ability to display surface-bound biomolecules with retained biological function. Versatile, stable, and facile methods for the immobilization of bioactive compounds on surfaces have expanded the application of high-throughput "omics"-scale screening of molecular interactions by nonexpert laboratories. Herein, we demonstrate the potential of simplified chemistries to fabricate a glycan microarray, utilizing divinyl sulfone (DVS)-modified surfaces for the covalent immobilization of natural and chemically derived carbohydrates, as well as glycoproteins. The bioactivity of the captured glycans was quantitatively examined by surface plasmon resonance imaging (SPRi). Composition and spectroscopic evidence of carbohydrate species on the DVS-modified surface were obtained by X-ray photoelectron spectroscopy (XPS) and time-of-flight secondary ion mass spectrometry (ToF-SIMS), respectively. The site-selective immobilization of glycans based on relative nucleophilicity (reducing sugar vs amine- and sulfhydryl-derived saccharides) and anomeric configuration was also examined. Our results demonstrate straightforward and reproducible conjugation of a variety of functional biomolecules onto a vinyl sulfone-modified biosensor surface. The simplicity of this method will have a significant impact on glycomics research, as it expands the ability of nonsynthetic laboratories to rapidly construct functional glycan microarrays and quantitative biosensors.
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Affiliation(s)
| | | | - Daniel M. Ratner
- Department of Bioengineering, University of Washington, Seattle, Washington 98195
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21
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Pal TK, Dey T, Chakrabarty A, Dey D, Ghosh SK, Pathak T. First synthesis and antiprotozoal activities of divinyl sulfone-modified carbohydrates. Bioorg Med Chem Lett 2010; 20:3777-80. [DOI: 10.1016/j.bmcl.2010.04.056] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2009] [Revised: 02/28/2010] [Accepted: 04/15/2010] [Indexed: 10/19/2022]
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22
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Addition of amines and carbon nucleophiles to vinyl sulfone-modified 6-deoxy-hex-3-enopyranoside: a case of nucleophile dependent diastereoselectivity. Carbohydr Res 2009; 344:2336-41. [DOI: 10.1016/j.carres.2009.09.009] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2009] [Revised: 09/02/2009] [Accepted: 09/09/2009] [Indexed: 11/16/2022]
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Kim WH, Kang JA, Lee HR, Park AY, Chun P, Lee B, Kim J, Kim JA, Jeong LS, Moon HR. Efficient and practical synthesis of l-hamamelose. Carbohydr Res 2009; 344:2317-21. [DOI: 10.1016/j.carres.2009.09.011] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2009] [Revised: 09/10/2009] [Accepted: 09/12/2009] [Indexed: 11/29/2022]
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Pal TK, Pathak T. A surprising C-4 epimerization of 5-deoxy-5-sulfonylated pentofuranosides under Ramberg-Bäcklund reaction conditions. Carbohydr Res 2008; 343:2826-9. [PMID: 18790475 DOI: 10.1016/j.carres.2008.08.010] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2008] [Revised: 07/24/2008] [Accepted: 08/07/2008] [Indexed: 11/16/2022]
Abstract
Treatment of methyl 5-deoxy-2,3-O-isopropylidene-5-(benzylsulfonyl)-β-D-ribofuranoside with CBr(2)F(2)-KOH/Al(2)O(3) afforded the corresponding olefinic sugar. The methyl- and the isopropyl-analogues in contrast underwent epimerization at C-4 to generate the α-L-lyxo derivatives.
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Affiliation(s)
- Tarun Kumar Pal
- Department of Chemistry, Indian Institute of Technology, Kharagpur 721 302, India
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Diastereoselective addition of planar N-heterocycles to vinyl sulfone-modified carbohydrates: a new route to isonucleosides. Tetrahedron 2008. [DOI: 10.1016/j.tet.2008.08.050] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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