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Cordova-Chávez RI, Trujillo-Ferrara JG, Padilla-Martínez II, González-Espinosa H, Abad-García A, Farfán-García ED, Ortega-Camarillo C, Contreras-Ramos A, Soriano-Ursúa MA. One-Step Synthesis, Crystallography, and Acute Toxicity of Two Boron-Carbohydrate Adducts That Induce Sedation in Mice. Pharmaceuticals (Basel) 2024; 17:781. [PMID: 38931447 PMCID: PMC11206247 DOI: 10.3390/ph17060781] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2024] [Revised: 06/08/2024] [Accepted: 06/11/2024] [Indexed: 06/28/2024] Open
Abstract
Boronic acids form diester bonds with cis-hydroxyl groups in carbohydrates. The formation of these adducts could impair the physical and chemical properties of precursors, even their biological activity. Two carbohydrate derivatives from d-fructose and d-arabinose and phenylboronic acid were synthesized in a straightforward one-step procedure and chemically characterized via spectroscopy and X-ray diffraction crystallography. Additionally, an acute toxicity test was performed to determine their lethal dose 50 (LD50) values by using Lorke's method. Analytical chemistry assays confirmed the formation of adducts by the generation of diester bonds with the β-d-pyranose of carbohydrates, including signals corresponding to the formation of new bonds, such as the stretching of B-O bonds. NMR spectra yielded information about the stereoselectivity in the synthesis reaction: Just one signal was found in the range for the anomeric carbon in the 13C NMR spectra of both adducts. The acute toxicity tests showed that the LD50 value for both compounds was 1265 mg/kg, while the effective dose 50 (ED50) for sedation was 531 mg/kg. However, differences were found in the onset and lapse of sedation. For example, the arabinose derivative induced sedation for more than 48 h at 600 mg/kg, while the fructose derivative induced sedation for less than 6 h at the same dose without the death of the mice. Thus, we report for the first time two boron-containing carbohydrate derivatives inducing sedation after intraperitoneal administration. They are bioactive and highly safe agents. Further biological evaluation is desirable to explore their medical applications.
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Affiliation(s)
- Ricardo Ivan Cordova-Chávez
- Laboratorio de Neurofisiología, Sección de Estudios de Posgrado e Investigación, Escuela Superior de Medicina, Instituto Politécnico Nacional, Plan de San Luis y Díaz Mirón s/n, Mexico City 11340, Mexico; (R.I.C.-C.); (H.G.-E.); (A.A.-G.)
- Laboratorio de Bioquímica, Sección de Estudios de Posgrado e Investigación, Escuela Superior de Medicina, Instituto Politécnico Nacional, Plan de San Luis y Díaz Mirón s/n, Mexico City 11340, Mexico;
| | - José G. Trujillo-Ferrara
- Laboratorio de Bioquímica, Sección de Estudios de Posgrado e Investigación, Escuela Superior de Medicina, Instituto Politécnico Nacional, Plan de San Luis y Díaz Mirón s/n, Mexico City 11340, Mexico;
| | - Itzia I. Padilla-Martínez
- Laboratorio de Química Supramolecular y Nanociencias, Unidad Profesional Interdisciplinaria de Biotecnología, Instituto Politécnico Nacional, Av. Acueducto s/n, Barrio la Laguna Ticomán, Mexico City 07340, Mexico;
| | - Héctor González-Espinosa
- Laboratorio de Neurofisiología, Sección de Estudios de Posgrado e Investigación, Escuela Superior de Medicina, Instituto Politécnico Nacional, Plan de San Luis y Díaz Mirón s/n, Mexico City 11340, Mexico; (R.I.C.-C.); (H.G.-E.); (A.A.-G.)
| | - Antonio Abad-García
- Laboratorio de Neurofisiología, Sección de Estudios de Posgrado e Investigación, Escuela Superior de Medicina, Instituto Politécnico Nacional, Plan de San Luis y Díaz Mirón s/n, Mexico City 11340, Mexico; (R.I.C.-C.); (H.G.-E.); (A.A.-G.)
| | - Eunice D. Farfán-García
- Laboratorio de Bioquímica, Sección de Estudios de Posgrado e Investigación, Escuela Superior de Medicina, Instituto Politécnico Nacional, Plan de San Luis y Díaz Mirón s/n, Mexico City 11340, Mexico;
| | - Clara Ortega-Camarillo
- Medical Research Unit in Biochemistry, Specialties Hospital, National Medical Center SXXI, Instituto Mexicano del Seguro Social, Av. Cuauhtémoc 330, Col. Doctores, Alc. Cuauhtémoc, Mexico City 06720, Mexico;
| | - Alejandra Contreras-Ramos
- Laboratory of Molecular Biology in the Congenital Malformations Unit, Children’s Hospital of Mexico Federico Gomez (HIMFG), Calle Dr. Marques 162, Col. Doctores, Alc. Cuahutémoc, Mexico City 06720, Mexico;
| | - Marvin A. Soriano-Ursúa
- Laboratorio de Neurofisiología, Sección de Estudios de Posgrado e Investigación, Escuela Superior de Medicina, Instituto Politécnico Nacional, Plan de San Luis y Díaz Mirón s/n, Mexico City 11340, Mexico; (R.I.C.-C.); (H.G.-E.); (A.A.-G.)
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Martínez‐Aguirre MA, Medrano F, Ramírez‐Rave S, Yatsimirsky AK. Analysis of the relative stability of trigonal and tetrahedral boronate cyclic esters in terms of boronic acid and diol acidities and the strain release effect. J PHYS ORG CHEM 2022. [DOI: 10.1002/poc.4425] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
| | - Felipe Medrano
- Departamento de Ciencias químico‐biológicas Universidad de Sonora Hermosillo Sonora México
| | - Sandra Ramírez‐Rave
- Facultad de Química, Universidad Nacional Autónoma de México México D.F. México
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3
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Hoffmann C, Jourdain M, Grandjean A, Titz A, Jung G. β-Boronic Acid-Substituted Bodipy Dyes for Fluorescence Anisotropy Analysis of Carbohydrate Binding. Anal Chem 2022; 94:6112-6119. [DOI: 10.1021/acs.analchem.1c04654] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Caroline Hoffmann
- Biophysical Chemistry, Saarland University, Campus B2 2, 66123 Saarbrücken, Germany
- Department of Chemistry, Saarland University, 66123 Saarbrücken, Germany
| | - Matthias Jourdain
- Biophysical Chemistry, Saarland University, Campus B2 2, 66123 Saarbrücken, Germany
- Department of Chemistry, Saarland University, 66123 Saarbrücken, Germany
| | - Alexander Grandjean
- Biophysical Chemistry, Saarland University, Campus B2 2, 66123 Saarbrücken, Germany
- Department of Chemistry, Saarland University, 66123 Saarbrücken, Germany
| | - Alexander Titz
- Helmholtz Institute for Pharmaceutical Research Saarland, Helmholtz Centre for Infection Research, 66123 Saarbrücken, Germany
- Department of Chemistry, Saarland University, 66123 Saarbrücken, Germany
- Deutsches Zentrum für Infektionsforschung (DZIF), Standort Hannover-Braunschweig, 38124 Braunschweig, Germany
| | - Gregor Jung
- Biophysical Chemistry, Saarland University, Campus B2 2, 66123 Saarbrücken, Germany
- Department of Chemistry, Saarland University, 66123 Saarbrücken, Germany
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Kanyan D, Horacek-Glading M, Wildervanck MJ, Söhnel T, Ware DC, Brothers PJ. O-BODIPYs as fluorescent labels for sugars: glucose, xylose and ribose. Org Chem Front 2022. [DOI: 10.1039/d1qo01418h] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
Fluorescent 1 : 1, 1 : 2 and 1 : 3 sugar-O-BODIPY conjugates of glucose, xylose and ribose were characterised by 1H–11B HMBC and 11B NMR to discriminate between boron bound to 1,2-, 1,3- or 1,4-diol sites and furanose/pyranose sugar forms.
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Affiliation(s)
- Deepika Kanyan
- School of Chemical Sciences, The University of Auckland, Private Bag 92019, Auckland 1142, New Zealand
| | - Miriana Horacek-Glading
- School of Chemical Sciences, The University of Auckland, Private Bag 92019, Auckland 1142, New Zealand
| | - Martijn J. Wildervanck
- School of Chemical Sciences, The University of Auckland, Private Bag 92019, Auckland 1142, New Zealand
| | - Tilo Söhnel
- School of Chemical Sciences, The University of Auckland, Private Bag 92019, Auckland 1142, New Zealand
| | - David C. Ware
- School of Chemical Sciences, The University of Auckland, Private Bag 92019, Auckland 1142, New Zealand
| | - Penelope J. Brothers
- School of Chemical Sciences, The University of Auckland, Private Bag 92019, Auckland 1142, New Zealand
- Research School of Chemistry, Australian National University, 137 Sullivan's Creek Road, Canberra ACT 2601, Australia
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5
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Martínez-Aguirre MA, Flores-Alamo M, Medrano F, Yatsimirsky AK. Examination of pinanediol-boronic acid ester formation in aqueous media: relevance to the relative stability of trigonal and tetrahedral boronate esters. Org Biomol Chem 2020; 18:2716-2726. [PMID: 32211727 DOI: 10.1039/d0ob00201a] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
The interaction of pinanediol with 2-fluorophenylboronic acid and several other substituted phenylboronic acids was studied in 40% vol. aqueous acetonitrile by 1H and 11B NMR, potentiometric and spectrophotometric titrations at variable pH values. The experimental results reveal the formation of a very stable trigonal ester (Ktrig ≈ 2 × 104 M-1) and a significantly less stable tetrahedral hydroxocomplex (Ktet ≈ 5 × 103 M-1) in contrast to the traditionally observed inverted order of stabilities Ktrig < Ktet. Comparison of the crystal structure of the trigonal ester isolated from aqueous acetonitrile with the DFT simulated structure of the respective hydroxocomplex shows that an unusual order of stabilities Ktrig > Ktet is observed in spite of the existence of the usual strain release effect in the O-B-O angle considered responsible for the typically observed increased stability of the tetrahedral hydroxocomplex. A complementary study of the stability of the six-membered cyclic boronate esters of chromotropic acid demonstrated the order Ktrig ≪ Ktet although the strain was absent in these esters. The results for m-, p-substituted phenylboronic acids show that the stability of both five- and six-membered trigonal esters formed with pinanediol and chromotropic acid, respectively, is insensitive to electronic effects but the electron accepting substituents stabilize the hydroxocomplexes. It follows from the whole set of results that Ktet can be much larger than Ktrig in the absence of the strain, but with a sufficiently acidic diol, and that the presence of the strain does not necessarily make Ktet larger than Ktrig for a less acidic diol with a purely saturated hydrocarbon backbone. Thus, the electronic effects manifested in the acidity of the diol appear to be more significant than the strain release effect in determining the Ktet/Ktrig ratio.
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Affiliation(s)
| | - Marcos Flores-Alamo
- Facultad de Química, Universidad Nacional Autónoma de México, 04510 México D.F., Mexico.
| | - Felipe Medrano
- Departamento de Ciencias químico-biológicas, Universidad de Sonora, Rosales y Luis Encinas Johnson s/n, Centro 83000, Hermosillo, Sonora, Mexico
| | - Anatoly K Yatsimirsky
- Facultad de Química, Universidad Nacional Autónoma de México, 04510 México D.F., Mexico.
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Bilge Koçak S, Kaya Ö, Kılıç Z, Coban B, Yildiz U, Çoşut B. Syntheses, spectral and chiral properties and DNA interactions of multi-heterocyclic di- and trinuclear boron complexes. NEW J CHEM 2020. [DOI: 10.1039/d0nj04474a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Stereoisomers of Salen-boron complexes with two equivalent stereogenic B-centers giving rise to diastereoisomers were assigned by CD and NMR spectra.
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Affiliation(s)
| | - Özgecan Kaya
- Department of Chemistry
- Ankara University
- 06100 Ankara
- Turkey
| | - Zeynel Kılıç
- Department of Chemistry
- Ankara University
- 06100 Ankara
- Turkey
| | - Burak Coban
- Department of Chemistry
- Zonguldak Bülent Ecevit University
- Incivez
- 67100 Zonguldak
- Turkey
| | - Ufuk Yildiz
- Department of Chemistry
- Zonguldak Bülent Ecevit University
- Incivez
- 67100 Zonguldak
- Turkey
| | - Bünyemin Çoşut
- Department of Chemistry
- Gebze Technical University
- 41400 Gebze-Kocaeli
- Turkey
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Dimakos V, Taylor MS. Site-Selective Functionalization of Hydroxyl Groups in Carbohydrate Derivatives. Chem Rev 2018; 118:11457-11517. [DOI: 10.1021/acs.chemrev.8b00442] [Citation(s) in RCA: 148] [Impact Index Per Article: 24.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Affiliation(s)
- Victoria Dimakos
- Department of Chemistry, University of Toronto, 80 St. George Street, Toronto, ON M5S 3H6, Canada
| | - Mark S. Taylor
- Department of Chemistry, University of Toronto, 80 St. George Street, Toronto, ON M5S 3H6, Canada
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8
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Manhas S, Taylor MS. Boronic Acids as Phase-Transfer Reagents for Fischer Glycosidations in Low-Polarity Solvents. J Org Chem 2017; 82:11406-11417. [DOI: 10.1021/acs.joc.7b01880] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
- Sanjay Manhas
- Department of Chemistry, University of Toronto, 80 St. George Street, Toronto, ON M5S 3H6, Canada
| | - Mark S. Taylor
- Department of Chemistry, University of Toronto, 80 St. George Street, Toronto, ON M5S 3H6, Canada
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9
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Kirschner RA, Geyer A. Reversible Boronic Ester Formation of Ribopyranosylated Glycopeptides. ChemistrySelect 2016. [DOI: 10.1002/slct.201601240] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Romina A. Kirschner
- Faculty of Chemistry; Philipps University Marburg; Hans-Meerwein-Straße 4 35032 Marburg
| | - Armin Geyer
- Faculty of Chemistry; Philipps University Marburg; Hans-Meerwein-Straße 4 35032 Marburg
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10
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Synthesis, characterization and antimicrobial activity of novel Schiff base tethered boronate esters of 1,2-O-isopropylidene-α-d-xylofuranose. Bioorg Med Chem Lett 2016; 26:3447-52. [DOI: 10.1016/j.bmcl.2016.06.049] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2016] [Revised: 05/26/2016] [Accepted: 06/17/2016] [Indexed: 02/06/2023]
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11
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Oesch D, Luedtke NW. Fluorescent chemosensors of carbohydrate triols exhibiting TICT emissions. Chem Commun (Camb) 2015; 51:12641-4. [DOI: 10.1039/c5cc03857j] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
4-4′-Disubstituted biphenyl boronic acids (BBAs) are push–pull fluorophores with “turn-on” fluorescence properties.
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Affiliation(s)
- David Oesch
- Department of Chemistry
- University of Zürich
- CH-8057 Zürich
- Switzerland
| | - Nathan W. Luedtke
- Department of Chemistry
- University of Zürich
- CH-8057 Zürich
- Switzerland
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12
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Reddy ER, Trivedi R, Sarma AVS, Sridhar B, Anantaraju HS, Sriram D, Yogeeswari P, Nagesh N. Sugar-boronate ester scaffold tethered pyridyl-imine palladium(ii) complexes: synthesis and their in vitro anticancer evaluation. Dalton Trans 2015; 44:17600-16. [DOI: 10.1039/c5dt03266k] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
The anticancer activity of sugar-boronate ester containing palladium(ii) complexes is reported.
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Affiliation(s)
- Eda Rami Reddy
- Inorganic and Physical Chemistry Division
- CSIR-IICT
- Hyderabad-500007
- India
| | - Rajiv Trivedi
- Inorganic and Physical Chemistry Division
- CSIR-IICT
- Hyderabad-500007
- India
| | | | | | | | - Dharmarajan Sriram
- Department of Pharmacy
- Birla Institute of Technology & Science – Pilani
- Hyderabad 500 078
- India
| | - Perumal Yogeeswari
- Department of Pharmacy
- Birla Institute of Technology & Science – Pilani
- Hyderabad 500 078
- India
| | - Narayana Nagesh
- CSIR-Centre for Cellular and Molecular Biology
- Hyderabad-500 007
- India
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13
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Karabacak M, Kose E, Atac A, Sas E, Asiri A, Kurt M. Experimental (FT-IR, FT-Raman, UV–Vis, 1H and 13CNMR) and computational (density functional theory) studies on 3-bromophenylboronic acid. J Mol Struct 2014. [DOI: 10.1016/j.molstruc.2014.07.058] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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14
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Toukach FV, Ananikov VP. Recent advances in computational predictions of NMR parameters for the structure elucidation of carbohydrates: methods and limitations. Chem Soc Rev 2013; 42:8376-415. [DOI: 10.1039/c3cs60073d] [Citation(s) in RCA: 91] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
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15
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Molecularly imprinted polymers for separation of various sugars from human urine. Talanta 2011; 87:74-9. [DOI: 10.1016/j.talanta.2011.09.043] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2011] [Revised: 09/15/2011] [Accepted: 09/24/2011] [Indexed: 11/17/2022]
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16
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Schulten J, Klüfers P. Dibutylsilylene–pentose bis-chelates: on the glycoses’ binding sites for strongly Lewis-acidic centres. Carbohydr Res 2011; 346:1767-75. [DOI: 10.1016/j.carres.2011.05.035] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2011] [Revised: 05/30/2011] [Accepted: 05/31/2011] [Indexed: 11/26/2022]
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17
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Hess D, Klüfers P. Phenylboronic acid esters of the common 2-deoxy-aldoses. Carbohydr Res 2011; 346:1752-9. [PMID: 21816393 DOI: 10.1016/j.carres.2011.05.031] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2011] [Revised: 05/24/2011] [Accepted: 05/27/2011] [Indexed: 11/18/2022]
Abstract
Phenylboronic acid esters are formed by the three common 2-deoxy aldoses: 2-deoxy-d-erythro-pentose ('2-deoxy-d-ribose'), 2-deoxy-d-lyxo-hexose ('2-deoxy-d-galactose'), and 2-deoxy-d-arabino-hexose ('2-deoxy-d-glucose'). The major species that was formed from equimolar quantities of boronic acid and the aldose, was the 3,4-monoester of the pentopyranose in a skew-boat conformation, and the 4,6-monoester in the case of the two hexopyranoses. A double molar quantity of boronic acid led, for both 2-deoxy-hexoses, to the diester of the open-chain aldehydo isomer as the major product: the 3,5:4,6-diester for the lyxo-configured deoxy-hexose, and the 3,4:5,6-diester of the arabino-configured isomer. Minor products of all reactions were identified by a combined NMR/DFT methodology.
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Affiliation(s)
- David Hess
- Ludwig-Maximilians-Universität, Department Chemie, Butenandtstraße 5-13, München, Germany
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Trivedi R, Rami Reddy E, Kiran Kumar C, Sridhar B, Pranay Kumar K, Srinivasa Rao M. Efficient synthesis, structural characterization and anti-microbial activity of chiral aryl boronate esters of 1,2- O -isopropylidene-α- d -xylofuranose. Bioorg Med Chem Lett 2011; 21:3890-3. [DOI: 10.1016/j.bmcl.2011.05.036] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2011] [Revised: 04/27/2011] [Accepted: 05/10/2011] [Indexed: 12/15/2022]
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