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Benham PM, Beckman EJ. Integrating Spatial Analyses of Genomic and Physiological Data to Understand Avian Responses to Environmental Change. Integr Comp Biol 2024; 64:1792-1810. [PMID: 38830811 DOI: 10.1093/icb/icae059] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2024] [Revised: 05/03/2024] [Accepted: 05/20/2024] [Indexed: 06/05/2024] Open
Abstract
Projected rates of climate change over the next century are expected to force species to shift ranges, adapt, or acclimate to evade extinction. Predicting which of these scenarios may be most likely is a central challenge for conserving biodiversity in the immediate future. Modeling frameworks that take advantage of intraspecific variation across environmental gradients can be particularly important for meeting this challenge. While these space-for-time approaches are essential for climatic and genomic modeling approaches, mechanistic models that incorporate ecological physiology data into assessing species vulnerabilities rarely include intraspecific variation. A major reason for this gap is the general lack of empirical data on intraspecific geographic variation in avian physiological traits. In this review, we outline the evidence for and processes shaping geographic variation in avian traits. We use the example of evaporative water loss to underscore the lack of research on geographic variation, even in traits central to cooling costs in birds. We next demonstrate how shifting the focus of avian physiological research to intraspecific variation can facilitate greater integration with emerging genomics approaches. Finally, we outline important next steps for an integrative approach to advance understanding of avian physiological adaptation within species. Addressing the knowledge gaps outlined in this review will contribute to an improved predictive framework that synthesizes environmental, morphological, physiological, and genomic data to assess species specific vulnerabilities to a warming planet.
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Affiliation(s)
- Phred M Benham
- Museum of Vertebrate Zoology, University of California Berkeley, Berkeley, CA 94720, USA
- Department of Integrative Biology, University of California Berkeley, Berkeley, CA 94720, USA
| | - Elizabeth J Beckman
- Museum of Vertebrate Zoology, University of California Berkeley, Berkeley, CA 94720, USA
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Ren S, Zhang L, Tang X, Zhao Y, Cheng Q, Speakman JR, Zhang Y. Temporal and spatial variations in body mass and thermogenic capacity associated with alterations in the gut microbiota and host transcriptome in mammalian herbivores. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 907:167776. [PMID: 37848151 DOI: 10.1016/j.scitotenv.2023.167776] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2023] [Revised: 10/07/2023] [Accepted: 10/10/2023] [Indexed: 10/19/2023]
Abstract
Most wild animals follow Bergmann's rule and grow in body size as cold stress increases. However, the underlying thermogenic strategies and their relationship with the gut microbiota have not been comprehensively elucidated. Herein, we used the plateau pikas as a model to investigate body mass, thermogenic capacity, host transcriptome, gut microbiota and metabolites collected from seven sites ranging from 3100 to 4700 m on the Qinghai-Tibetan Plateau (QTP) in summer and winter to test the seasonal thermogenesis strategy in small herbivorous mammals. The results showed that the increase in pika body mass with altitude followed Bergmann's rule in summer and an inverted parabolic shape was observed in winter. However, physiological parameters and transcriptome profiles indicated that the thermogenic capacity of pikas increased with altitude in summer and decreased with altitude in winter. The abundance of Firmicutes declined, whereas that of Bacteroidetes significantly increased with altitude in summer. Phenylalanine, tyrosine, and proline were enriched in summer, whereas carnitine and succinate were enriched in winter. Spearman's correlation analysis revealed significant positive correlations between Prevotella, Bacteroides, Ruminococcus, Alistipes and Akkermansia and metabolites of amino acids, pika physiological parameters, and transcriptome profiles. Moreover, metabolites of amino acids further showed significant positive correlations with pika physiological parameters and transcriptome profiles. Our study highlights that the changes in body mass and thermogenic capacity with altitude distinctly differentiate small herbivorous mammals between summer and winter on the QTP, and that the gut microbiota may regulate host thermogenesis through its metabolites.
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Affiliation(s)
- Shien Ren
- Key Laboratory of Adaptation and Evolution of Plateau Biota, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, Xining 810008, China; Qinghai Provincial Key Laboratory of Animal Ecological Genomics, Xining 810008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Liangzhi Zhang
- Key Laboratory of Adaptation and Evolution of Plateau Biota, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, Xining 810008, China; Qinghai Provincial Key Laboratory of Animal Ecological Genomics, Xining 810008, China
| | - Xianjiang Tang
- Key Laboratory of Adaptation and Evolution of Plateau Biota, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, Xining 810008, China; Qinghai Provincial Key Laboratory of Animal Ecological Genomics, Xining 810008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Yaqi Zhao
- Key Laboratory of Adaptation and Evolution of Plateau Biota, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, Xining 810008, China; Qinghai Provincial Key Laboratory of Animal Ecological Genomics, Xining 810008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Qi Cheng
- Key Laboratory of Adaptation and Evolution of Plateau Biota, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, Xining 810008, China; Qinghai Provincial Key Laboratory of Animal Ecological Genomics, Xining 810008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - John R Speakman
- Shenzhen Key Laboratory of Metabolic Health, Center for Energy Metabolism and Reproduction, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China; Institute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen, UK
| | - Yanming Zhang
- Key Laboratory of Adaptation and Evolution of Plateau Biota, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, Xining 810008, China; Qinghai Provincial Key Laboratory of Animal Ecological Genomics, Xining 810008, China.
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Monge O, Maggini I, Schulze CH, Dullinger S, Fusani L. Physiologically vulnerable or resilient? Tropical birds, global warming, and redistributions. Ecol Evol 2023; 13:e9985. [PMID: 37082319 PMCID: PMC10111238 DOI: 10.1002/ece3.9985] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2022] [Revised: 02/16/2023] [Accepted: 03/23/2023] [Indexed: 04/22/2023] Open
Abstract
Tropical species are considered to be more threatened by climate change than those of other world regions. This increased sensitivity to warming is thought to stem from the assumptions of low physiological capacity to withstand temperature fluctuations and already living near their limits of heat tolerance under current climatic conditions. For birds, despite thorough documentation of community-level rearrangements, such as biotic attrition and elevational shifts, there is no consistent evidence of direct physiological sensitivity to warming. In this review, we provide an integrative outlook into the physiological response of tropical birds to thermal variation and their capacity to cope with warming. In short, evidence from the literature suggests that the assumed physiological sensitivity to warming attributed to tropical biotas does not seem to be a fundamental characteristic of tropical birds. Tropical birds do possess the physiological capacities to deal with fluctuating temperatures, including high-elevation species, and are prepared to withstand elevated levels of heat, even those living in hot and arid environments. However, there are still many unaddressed points that hinder a more complete understanding of the response of tropical birds to warming, such as cooling capacities when exposed to combined gradients of heat and humidity, the response of montane species to heat, and thermoregulation under increased levels of microclimatic stress in disturbed ecosystems. Further research into how populations and species from different ecological contexts handle warming will increase our understanding of current and future community rearrangements in tropical birds.
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Affiliation(s)
- Otto Monge
- Vienna Doctoral School of Ecology and EvolutionUniversity of ViennaDjerassiplatz 11030ViennaAustria
| | - Ivan Maggini
- Konrad‐Lorenz Institute of EthologyUniversity of Veterinary MedicineSavoyenstrasse 1a1160ViennaAustria
| | - Christian H. Schulze
- Department of Botany and Biodiversity ResearchUniversity of ViennaRennweg 141030ViennaAustria
| | - Stefan Dullinger
- Department of Botany and Biodiversity ResearchUniversity of ViennaRennweg 141030ViennaAustria
| | - Leonida Fusani
- Konrad‐Lorenz Institute of EthologyUniversity of Veterinary MedicineSavoyenstrasse 1a1160ViennaAustria
- Department of Behavioural and Cognitive BiologyUniversity of ViennaAlthanstrasse 141090ViennaAustria
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Marsden GE, Schoeman MC, Vosloo D. Rewarming rates of seven insectivorous bat species along an altitudinal gradient in South Africa. J Therm Biol 2022; 110:103341. [DOI: 10.1016/j.jtherbio.2022.103341] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2021] [Revised: 08/11/2022] [Accepted: 09/20/2022] [Indexed: 10/14/2022]
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