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Abrosimov SV, Protsenko BO, Mannaa AS, Vlasenko VG, Guda SA, Pankin IA, Burlov AS, Koshchienko YV, Guda AA, Soldatov AV. Improving sensitivity of XANES structural fit to the bridged metal-metal coordination. JOURNAL OF SYNCHROTRON RADIATION 2024; 31:447-455. [PMID: 38530834 DOI: 10.1107/s1600577524002091] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2023] [Accepted: 03/03/2024] [Indexed: 03/28/2024]
Abstract
Hard X-ray absorption spectroscopy is a valuable in situ probe for non-destructive diagnostics of metal sites. The low-energy interval of a spectrum (XANES) contains information about the metal oxidation state, ligand type, symmetry and distances in the first coordination shell but shows almost no dependency on the bridged metal-metal bond length. The higher-energy interval (EXAFS), on the contrary, is more sensitive to the coordination numbers and can decouple the contribution from distances in different coordination shells. Supervised machine-learning methods can combine information from different intervals of a spectrum; however, computational approaches for the near-edge region of the spectrum and higher energies are different. This work aims to keep all benefits of XANES and extend its sensitivity towards the interatomic distances in the first and second coordination shells. Using a binuclear bridged copper complex as a case study and cross-validation analysis as a quantitative tool it is shown that the first 170 eV above the edge are already sufficient to balance the contributions of Cu-O/N scattering and Cu-Cu scattering. As a more general outcome this work highlights the trivial but often overlooked importance of using `longer' energy intervals of XANES for structural refinement and machine-learning predictions. The first 200 eV above the absorption edge still do not require parametrization of Debye-Waller damping and can be calculated within full multiple scattering or finite difference approximations with only moderately increased computational costs.
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Affiliation(s)
- S V Abrosimov
- The Smart Materials Research Institute, Southern Federal University, Sladkova 178/24, 344090 Rostov-on-Don, Russian Federation
| | - B O Protsenko
- The Smart Materials Research Institute, Southern Federal University, Sladkova 178/24, 344090 Rostov-on-Don, Russian Federation
| | - A S Mannaa
- The Smart Materials Research Institute, Southern Federal University, Sladkova 178/24, 344090 Rostov-on-Don, Russian Federation
| | - V G Vlasenko
- Institute of Physics, Southern Federal University, Stachki Ave 194, 344090 Rostov-on-Don, Russian Federation
| | - S A Guda
- The Smart Materials Research Institute, Southern Federal University, Sladkova 178/24, 344090 Rostov-on-Don, Russian Federation
| | - I A Pankin
- The Smart Materials Research Institute, Southern Federal University, Sladkova 178/24, 344090 Rostov-on-Don, Russian Federation
| | - A S Burlov
- Institute of Physical and Organic Chemistry, Stachki Ave 194/2, 344090 Rostov-on-Don, Russian Federation
| | - Y V Koshchienko
- Institute of Physical and Organic Chemistry, Stachki Ave 194/2, 344090 Rostov-on-Don, Russian Federation
| | - A A Guda
- The Smart Materials Research Institute, Southern Federal University, Sladkova 178/24, 344090 Rostov-on-Don, Russian Federation
| | - A V Soldatov
- The Smart Materials Research Institute, Southern Federal University, Sladkova 178/24, 344090 Rostov-on-Don, Russian Federation
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2
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Middya P, Chowdhury D, Chattopadhyay S. An overview of the synthesis, structures and magnetic properties of end-on pseudo-halide bridged dinuclear nickel(II) complexes with N,O-donor salicylaldimine Schiff base blocking ligands. Inorganica Chim Acta 2023. [DOI: 10.1016/j.ica.2023.121489] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/28/2023]
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3
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Synthesis, Molecular, and Supramolecular Structures of Two Azide-Bridged Cd(II) and Cu(II) Coordination Polymers. Symmetry (Basel) 2023. [DOI: 10.3390/sym15030619] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/05/2023] Open
Abstract
Two 1D coordination polymers were synthesized by reaction of two ligands, 2-amino-4-picoline (2A4Pic) and quinoline-6-carboxylic acid (Qu-6-COOH) with two metal (II) nitrate (M = Cd and Cu) in the presence of azide as a linker. The synthesized metal complexes [Cd(2A4Pic)2(N3)2]n; (1) and [Cu(Qu-6-COO)(N3)(H2O)]n; (2) were isolated in single crystals and their X-ray structures revealed a 1D polymeric structure. Due to symmetry considerations, the asymmetric formula is half a [Cd(2A4Pic)2(N3)2] unit for 1 and one [Cu(Qu-6-COO)(N3)(H2O)] unit for 2. In complex 1, the Cd(II) is hexa-coordinated with two 2A4Pic molecules and four μ(1,1) azide units. Hence, the CdN6 coordination environment has a slightly distorted octahedral geometry. In 2, the Cu(II) is hexa-coordinated with three different ligands (Qu-6-COO¯, H2O and μ(1,1) N3¯) where all are connectors between the crystallographically related Cu(II) sites. Additionally, complex 2 distorted CuN2O4 octahedral geometry. In both complexes, the polymer arrays are connected by N…H hydrogen bonds and π–π stacking interactions. Based on Hirshfeld analysis, the percentages of N…H contacts are 43.1 and 27.4% for 1 and 2, respectively, while %C...C are 5.6 and 9.3%, respectively. Analysis of Cu-N, Cu-O, and Cd-N bonds using DFT calculations showed predominantly closed-shell coordination interactions with little covalent characters. Additionally, the negatively charged ligand groups were found to compensate the positive charge of the central metal ion to a larger extent than the electrically neutral ligands.
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Middya P, Roy D, Chattopadhyay S. Synthesis, structures and magnetic properties of end-on pseudo-halide bridged dinuclear copper(II) complexes with N,O-donor salicylaldimine Schiff base blocking ligands: A review. Inorganica Chim Acta 2023. [DOI: 10.1016/j.ica.2023.121377] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
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5
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Experimental and theoretical investigation of hydrogen bonded supramolecular assemblies through water molecules in a copper(II)-EGTA complex. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.133400] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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6
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Xie KF, Huang Y, Li SZ, Li LL, Dong WK. AN INVESTIGATION INTO THE IMPACT OF INTRODUCED THIOCYANATE ANIONS ON THE TRINUCLEAR Co(II) SALAMO-BASED COMPLEX. J STRUCT CHEM+ 2022. [DOI: 10.1134/s0022476622080078] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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7
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Miscellaneous dimensional coordination polymers and luminescence emission properties of cadmium(II)-pseudohalide complexes. Inorganica Chim Acta 2022. [DOI: 10.1016/j.ica.2022.120871] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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8
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Setifi Z, Setifi F, Benmansour S, Liu X, Mague JT, Gómez-García CJ, Konieczny P, Reedijk J. A rare example of a double metamagnetic transition leading to 2D and 3D long-range order in the two-dimensional pyrazine- and azido-bridged cobalt(II) compound [Co(pyz)(N 3) 2]. Dalton Trans 2022; 51:5617-5623. [PMID: 35318476 DOI: 10.1039/d2dt00294a] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The synthesis, characterization, crystal structure and detailed magnetic properties of a pyrazine (pyz) and azido (N3) bridged cobalt(II) compound of formula [Co(N3)2(pyz)] (1) are reported. Compound 1 shows a layered structure formed by Co(II) chains with double μ-N3(κN1,N1) bridges that are further connected by μ-(pyrazine-κN1,N4) bridges. The layers present weak van der Waals interactions between azido terminal groups. The magnetic properties show the presence of a metamagnetic behaviour in 1 with two critical fields of 200 and 400 mT at low temperatures. AC magnetic measurements show the presence of a long-range 2D ferromagnetic order at Tc ≈ 8.0-7.0 K for dc fields above 200 mT and a long-range 3D ferromagnetic order at Tc ≈ 4.5 K for dc fields above 400 mT.
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Affiliation(s)
- Zouaoui Setifi
- Laboratoire de Chimie, Ingénierie Moléculaire et Nanostructures (LCIMN), Université Ferhat Abbas Sétif 1, Sétif 19000, Algeria. .,Département de Technologie, Faculté de Technologie, Université 20 Août 1955-Skikda, Skikda 21000, Algeria
| | - Fatima Setifi
- Laboratoire de Chimie, Ingénierie Moléculaire et Nanostructures (LCIMN), Université Ferhat Abbas Sétif 1, Sétif 19000, Algeria.
| | - Samia Benmansour
- Departmento de Química Inorgánica, C/Dr. Moliner, 50, 46100 Burjasot, Valencia, Spain.
| | - Xiangyu Liu
- State Key Laboratory of High-efficiency Utilization of Coal and Green Chemical Engineering, National Demonstration Center for Experimental Chemistry Education, College of Chemistry and Chemical Engineering, Ningxia University, Yinchuan 750021, China.
| | - Joel T Mague
- Department of Chemistry, Tulane University, New Orleans, LA, USA.
| | - Carlos J Gómez-García
- Departmento de Química Inorgánica, C/Dr. Moliner, 50, 46100 Burjasot, Valencia, Spain.
| | - Piotr Konieczny
- Institute of Nuclear Physics, Polish Academy of Sciences, Radzikowskiego 152, 31-342 Krakow, Poland.
| | - Jan Reedijk
- Leiden Institute of Chemistry, Leiden University, P.O. Box 9502, 2300 RA Leiden, The Netherlands.
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9
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Ligand mediated structural diversity of copper(II)-azido moiety: Synthesis, structure and magnetic study. Inorganica Chim Acta 2022. [DOI: 10.1016/j.ica.2021.120713] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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10
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Gupta Y, Zaidi Z, Mehta S, Chandewar PR, Kumar N, Paul AK, Shee D, Mondal A, Sorokhaibam LG, Banerjee A. Assembly of a coordination polymer with sulphate-capped pentamolybdate units and copper: Synthesis, Structure, Magnetic and Catalytic studies. Dalton Trans 2022; 51:7255-7267. [DOI: 10.1039/d2dt00816e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A new coordination polymer based upon the sulphate-capped pentamolybdate unit has been synthesized from the reaction of {Mo3S7Br6}2- with copper(II) bromide and pyridine, in DMF. The as-synthesized compound, formulated as...
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11
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Gaur R, Kallem P. Structural and theoretical study of copper( ii) complex incorporating chalcone and 2,2′-bipyridine mixed ligands: a probable candidate for optical material. NEW J CHEM 2022. [DOI: 10.1039/d2nj02988j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
We report the synthesis, structural and photophysical data for a Cu(ii) complex, [Cu(L·bpy)(NO3)], with mixed chalcone and 2,2′-bipyridine ligands. Calculations are used to consider prospective applications in optoelectronic devices.
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Affiliation(s)
- Ruchi Gaur
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi-221005, India
| | - Parashuram Kallem
- Center for Membranes and Advanced Water Technology (CMAT), Khalifa University of Science and Technology, P.O. Box 127788, Abu Dhabi, United Arab Emirates
- Department of Chemical Engineering, Khalifa University of Science and Technology, PO Box 127788, Abu Dhabi, United Arab Emirates
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12
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Bhaumik PK, Gomila RM, Frontera A, Benmansour Souilamas S, Gomez Garcia CJ, Chattopadhyay S. Insight into non-covalent interactions in a [Cu(N3)4]2- bridged hetero-pentanuclear copper(II)/sodium complex with special emphasis on the strong CH···π[Cu(N3)4] interactions. NEW J CHEM 2022. [DOI: 10.1039/d2nj00614f] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The swastika-shaped anion, [Cu(N3)4]2- in the pentanuclear hetero-metallic copper(II)-Sodium complex, [(CuLNa)2(µ-N3)2Cu(N3)2] (1), where H2L = N,N'-bis(3-ethoxysalicylidene)-2,2-dimethylpropane-1,3-diamine (N2O4 donor compartmental Schiff base) is nearly planar and provides a π-basic surface adequate...
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13
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Bikas R, Korabik M, Sanchiz J, Noshiranzadeh N, Mirzakhani P, Gałkowska A, Szeliga D, Kozakiewicz-Piekarz A. Crystal structure and magnetic interactions of a new alkoxido and azido bridged 1D copper(II) coordination polymer. J SOLID STATE CHEM 2021. [DOI: 10.1016/j.jssc.2021.122484] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
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14
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New classes of organic Chelate-Free coordination Polymers: An End-On Azido-Bridged Cu(II) 1-D chain composed of {Cu6(N3)12} repeating units. Polyhedron 2021. [DOI: 10.1016/j.poly.2021.115315] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
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15
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Abdul Ghaffar, Nawaz S, Munawar A, Zierkiewicz W, Michalczyk M, Helios K, Hussain SZ, Rashid A, Ahmad S. DFT Calculations and SEM–EDX Analysis of Copper(II)-Azide Complexes; [Cu(en)2(N3)2] and [Cu(Tmen)(N3)2]2 (Tmen = N,N,N',N'-Tetramethylethylenediamine). RUSSIAN JOURNAL OF PHYSICAL CHEMISTRY B 2021. [DOI: 10.1134/s1990793121090074] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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16
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Synthesis, X-ray structure and biological activity of mono- and dinuclear copper complexes derived from N-{2-[(2-diethylamino(alkyl)imino)-methyl]-phenyl}-4-methyl-benzenesulfonamide. Inorganica Chim Acta 2021. [DOI: 10.1016/j.ica.2021.120408] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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17
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Stereochemical Geometries and Photoluminescence in Pseudo-Halido-Zinc(II) Complexes. Structural Comparison between the Corresponding Cadmium(II) Analogs. INORGANICS 2021. [DOI: 10.3390/inorganics9070053] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
Six pseudohalide zinc(II) containing a variety of N-donor auxiliary amines were structurally characterized. These include two mononuclear trigonal bipyramidal [Zn(NTB)(N3)]ClO4·½H2O (3) and [Zn(TPA)(NCS)]ClO4 (4), two distorted octahedral [Zn(1,8-damnph)2(dca)2] (5) and [Zn(8-amq)2(dca)2] (6a) as well as two 1D polymeric chains catena-[Zn(isq)2(μ1,5-dca)2] (7) and catena-[Zn(N,N-Me2en)2(μ1,5-dca)]dca (8), where NTB = tris(2-benzimidazolylmethyl)amine, TPA = tris(2-pyridylmethyl)amine, 1,8-damnph = 1,8-diaminonaphthalene, 8-amq = 8-amino-quinoline, isq = isoquinoline (isq) and N,N-Me2en = N,N-dimethylethylenediamine. In general, with the exception of 6 and 8, the complexes exhibited luminescence emission in MeOH associated with red shift of the emission maxima, and the strongest visible fluorescence peak was detected at 421 nm (λex = 330 nm) in the case of Complex 5.
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Lazari G, Grammatikopoulos S, Perlepes SP, Stamatatos TC. Combining benzotriazoles and azides in copper(II) chemistry: synthesis, structural and spectroscopic characterization of a 1-D corrugated tape [Cu(N 3) 2(1-Mebta)] n coordination polymer (1-Mebta = 1-methylbenzotriazole). J COORD CHEM 2021. [DOI: 10.1080/00958972.2021.1934460] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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19
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Self-assembled H-bonded supramolecular interactions in monomeric complex [Mg(H2O)6].L2.2bipy.H2O; [LH = 2-amino-5-nitrobenzoic acid, bipy = 4,4′-bipyridine]]]]: Joint theoretical calculations and Hirshfeld surface analysis. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2021.130073] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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20
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Chen X, Dong X, Zhou ZH. Polymeric copper(II) diethylenetriaminepentaacetates for gas adsorptions. Polyhedron 2021. [DOI: 10.1016/j.poly.2020.114970] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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21
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Wu J, Li B, Wang H, Lai Y, Ye Y, Zou Y, Tian J, Xu Y. How the magnetic field impacts the chiroptical activities of helical copper enantiomers. NEW J CHEM 2021. [DOI: 10.1039/d1nj03803f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A pair of enantiomers {[Cu(l-pro)(l-tyr)]·2H2O}n (L-1) and {[Cu(d-pro)(d-tyr)]·2H2O}n (D-1) based on the chiral ligands l/d-proline and l/d-tyrosine were synthesized and investigated using single-crystal X-ray structure analysis, IR, thermogravimetric analysis, solid-state UV-Vis spectroscopy, circular dichroism, magnetic studies, and DFT calculations.
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Affiliation(s)
- Jialu Wu
- Department of Stomatology of Xiamen Medical College & Engineering Research Center of Fujian University for Stomatological Biomaterials, Xiamen 361023, China
| | - Bo Li
- Heibei Key Laboratory of Hazardous Chemicals Safety and Control Technology, School of Chemical and Environmental Engineering, North China Institute of Science and Technology, Langfang 065201, Hebei, China
| | - Hong Wang
- School and Hospital of Stomatology, Fujian Medical University, Fuzhou, Fujian 350000, China
| | - Yingzhen Lai
- Department of Stomatology of Xiamen Medical College & Engineering Research Center of Fujian University for Stomatological Biomaterials, Xiamen 361023, China
| | - Yue Ye
- Department of Stomatology of Xiamen Medical College & Engineering Research Center of Fujian University for Stomatological Biomaterials, Xiamen 361023, China
| | - Yongkang Zou
- Department of Stomatology of Xiamen Medical College & Engineering Research Center of Fujian University for Stomatological Biomaterials, Xiamen 361023, China
| | - Jumei Tian
- Department of Stomatology of Xiamen Medical College & Engineering Research Center of Fujian University for Stomatological Biomaterials, Xiamen 361023, China
| | - Yaohua Xu
- Beijing Zhongkebaice Technology Service Co., Ltd., China
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22
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Hazari A, Gomila RM, Frontera A, Drew MGB, Ghosh A. Change in molecular shapes of the trinuclear Cu II2Zn II complexes on Schiff base reduction: structural and theoretical investigations. CrystEngComm 2021. [DOI: 10.1039/d1ce00490e] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
Structural analyses and theoretical studies of two new Cu2Zn compounds and other analogous species established that subtle modification in a ligand system can stabilize various structures with versatile coordinating azide ion and flexible trinuclear core.
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Affiliation(s)
- Alokesh Hazari
- Department of Chemistry
- University College of Science
- University of Calcutta
- India
- Department of Chemistry
| | - Rosa M. Gomila
- Serveis Científico-Tècnics
- Universitat de les Illes Balears
- 07122 Palma de Mallorca
- Spain
| | - Antonio Frontera
- Departament de Química
- Universitat de les Illes Balears
- 07122 Palma de Mallorca
- Spain
| | - Michael G. B. Drew
- School of Chemistry
- The University of Reading
- Whiteknights, Reading RG6 6AD
- UK
| | - Ashutosh Ghosh
- Department of Chemistry
- University College of Science
- University of Calcutta
- India
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23
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Khan S, Dutta T, Cortijo M, González-Prieto R, Drew MGB, Gomila RM, Frontera A, Chattopadhyay S. Phenoxido mediated antiferromagnetic and azide mediated ferromagnetic coupling in two dinuclear ferromagnetic nickel( ii) complexes with isomeric Schiff bases: a theoretical insight on the pathway of magnetic interaction. CrystEngComm 2021. [DOI: 10.1039/d0ce01861a] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Two relatively rare mixed phenoxo and azide bridged dinuclear nickel(ii) complexes have been discussed. Both complexes show strong intermolecular hydrogen bonding interactions and exhibit ferromagnetic exchange coupling.
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Affiliation(s)
- Samim Khan
- Department of Chemistry
- Inorganic Section
- Jadavpur University
- Kolkata – 700032
- India
| | - Tamal Dutta
- Department of Chemistry
- Inorganic Section
- Jadavpur University
- Kolkata – 700032
- India
| | - Miguel Cortijo
- Departamento de Química Inorgánica
- Facultad de Ciencias Químicas
- Universidad Complutense de Madrid
- Madrid
- Spain
| | - Rodrigo González-Prieto
- Departamento de Química Inorgánica
- Facultad de Ciencias Químicas
- Universidad Complutense de Madrid
- Madrid
- Spain
| | | | - Rosa M. Gomila
- Serveis Cientifico-Tècnics
- Universitat de les Illes Balears
- 07122 Palma de Mallorca
- SPAIN
| | - Antonio Frontera
- Departament de Química
- Universitat de les Illes Balears
- 07122 Palma de Mallorca
- SPAIN
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24
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Ibrahim AB, Mahmoud GA, Meurer F, Bodensteiner M. Preparation and crystallographic studies of a new mercuric salicylaldimine complex for fabrication of microscaled and nanoscaled mercuric sulfide as antimicrobial agents against human pathogenic yeasts and filamentous fungi. Appl Organomet Chem 2020. [DOI: 10.1002/aoc.6134] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Ahmed B.M. Ibrahim
- Department of Chemistry, Faculty of Science Assiut University Assiut 71516 Egypt
| | | | - Florian Meurer
- Faculty of Chemistry and Pharmacy University of Regensburg Regensburg Germany
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25
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Chowdhury H, Rizzoli C, Adhikary C. Cyanide bridged 2-D homometallic mixed-valence copper coordination polymer: synthesis, crystal architecture, Hirshfeld surface analysis and magnetic behavior. J COORD CHEM 2020. [DOI: 10.1080/00958972.2020.1861445] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Affiliation(s)
- Habibar Chowdhury
- Department of Chemistry, KabiNazrul College, Murarai, Birbhum, West Bengal, India
| | - Corrado Rizzoli
- Departimento di Scienze Chimiche, della Vita e della Sostenibilità Ambientale, Parma, Italy
| | - Chandan Adhikary
- Department of Education, The University of Burdwan, Golapbag, Burdwan, West Bengal, India
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26
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Chowdhury H, Rizzoli C, Adhikary C. Azido derivatives of dinuclear copper(II) and 1D polynuclear nickel(II) complexes containing an unsymmetrical bidentate amine: synthesis, crystalline architecture, and magnetic behavior. TRANSIT METAL CHEM 2020. [DOI: 10.1007/s11243-020-00430-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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27
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Buta I, Ardelean A, Lönnecke P, Novitchi G, Hey-Hawkins E, Andruh M, Costisor O. Structural and magnetic properties of three one-dimensional nitrato-, azido- and phenoxido-bridged copper(II) coordination polymers. Polyhedron 2020. [DOI: 10.1016/j.poly.2020.114766] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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28
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Chowdhury H, Bera R, Rizzoli C, Bieńko D, Adhikary C. Double end-on azido derivative of a tridentate (NNO) Schiff base dimeric copper(II) complex: synthesis, X-ray structure, magnetic property and catalytic effectiveness. J COORD CHEM 2020. [DOI: 10.1080/00958972.2020.1836360] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Affiliation(s)
- Habibar Chowdhury
- Department of Chemistry, Kabi Nazrul College, Murarai, West Bengal, India
| | - Rajesh Bera
- Department of Chemistry, Dinabandhu Andrews College, Kolkata, West Bengal, India
| | - Corrado Rizzoli
- Departimento di Scienze Chimiche, della Vita e della Sostenibilità Ambientale, Parma, Italy
| | - Dariusz Bieńko
- Faculty of Chemistry, Wroclaw University of Science and Technology, Wroclaw, Poland
| | - Chandan Adhikary
- Department of Education, The University of Burdwan, Burdwan, West Bengal, India
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Laachir A, Guesmi S, Ketatni EM, Saadi M, El Ammari L, Mentré O, Esserti S, Faize M, Bentiss F. A new homobimetallic cobalt(II) complex based on the tetradentate 3,5-bis(2-pyridyl)-1H-1,2,4-triazole ligand: Synthesis, crystal structure, Hirshfeld analysis, spectroscopic characterization, magnetic properties and antimicrobial activities. Polyhedron 2020. [DOI: 10.1016/j.poly.2020.114722] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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30
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Chowdhury H, Bieńko A, Rizzoli C, Adhikary C. Syntheses, structures and magnetic behaviors of 1D and 3D µ1,5-dicyanamide bridged copper(II) coordination polymers containing a symmetrical 1,2-diamine as a chelator. Polyhedron 2020. [DOI: 10.1016/j.poly.2020.114693] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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31
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Ghorai P, Brandão P, Benmansour S, García CJG, Saha A. Azido and thiocyanato bridged dinuclear Ni(II) complexes involving 8-aminoquinoline based Schiff base as blocking ligands: Crystal structures, ferromagnetic properties and magneto-structural correlations. Polyhedron 2020. [DOI: 10.1016/j.poly.2020.114708] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
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32
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Five-Coordinated Geometries from Molecular Structures to Solutions in Copper(II) Complexes Generated from Polydentate- N-Donor Ligands and Pseudohalides. Molecules 2020; 25:molecules25153376. [PMID: 32722383 PMCID: PMC7436159 DOI: 10.3390/molecules25153376] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2020] [Revised: 07/22/2020] [Accepted: 07/23/2020] [Indexed: 11/17/2022] Open
Abstract
A novel series of mononuclear five-coordinated pseudohalido-Cu(II) complexes displaying distorted square bipyramidal: [Cu(L1)(NCS)2] (1), [Cu(L2)(NCS)2] (2) and [Cu(L3)(NCS)]ClO4 (5) as well as distorted trigonal bipyramidal: [Cu(isp3tren)(N3)]ClO4 (3), [Cu(isp3tren)(dca)]ClO4 (4) and [Cu(tedmpza)(dca)]ClO4·0.67H2O (6) geometries had been synthesized and structurally characterized using X-ray single crystal crystallography, elemental microanalysis, IR and UV-vis spectroscopy, and molar conductivity measurements. Different N-donor amine skeletons including tridentate: L1 = [(2-pyridyl)-2-ethyl)-(3,4-dimethoxy)-2-methylpyridyl]methylamine and L2 = [(2-pyridyl)-2-ethyl)-(3,5-dimethyl-4-methoxy)-2-methyl-pyridyl]methylamine, and tetradentate: L3 = bis(2-ethyl-di(3,5-dimethyl-1H-pyrazol-1-yl)-[2-(3,4-dimethoxy-pyridylmethyl)]amine, tedmpza = tris[(2-(3,5-dimethyl-1H-pyrazol-1-yl)ethyl]amine and isp3tren = tris[(2-isopropylamino)ethyl)]amine ligands were employed. Molecular structural parameters such as nature of coligand, its chelate ring size and steric environment incorporated into its skeleton, which lead to adopting one of the two limiting geometries in these complexes and other reported compounds are analyzed and correlated to their assigned geometries in solutions. Similar analysis were extended to other five-coordinated halido-Cu(II) complexes.
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33
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Ghorai P, Dey A, Brandão P, Benmansour S, Gómez García CJ, Ray PP, Saha A. Multifunctional Ni(II)-Based Metamagnetic Coordination Polymers for Electronic Device Fabrication. Inorg Chem 2020; 59:8749-8761. [DOI: 10.1021/acs.inorgchem.0c00389] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Pravat Ghorai
- Department of Chemistry, Jadavpur University, Kolkata 700032, India
| | - Arka Dey
- Department of Physics, Jadavpur University, Kolkata 700032, India
- Department of Condensed Matter Physics and Material Sciences, S. N. Bose National Centre for Basic Sciences, Block JD, Sec. III, Salt Lake, Kolkata 700106, India
| | - Paula Brandão
- Department of Chemistry, CICECO-Aveiro Institute of Materials, University of Aveiro, 3810-193 Aveiro, Portugal
| | - Samia Benmansour
- Instituto de Ciencia Molecular, Departamento de Química Inorgánica, Universidad de Valencia, C/José Beltrán, 2, 46980 Paterna (Valencia), Spain
| | - Carlos J. Gómez García
- Instituto de Ciencia Molecular, Departamento de Química Inorgánica, Universidad de Valencia, C/José Beltrán, 2, 46980 Paterna (Valencia), Spain
| | | | - Amrita Saha
- Department of Chemistry, Jadavpur University, Kolkata 700032, India
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34
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Bikas R, Ajormal F, Noshiranzadeh N, Emami M, Kozakiewicz A. 1D Azido bridged Cu(II) coordination polymer with 1,3‐oxazolidine ligand as an effective catalyst for green click synthesis of 1,2,3‐triazoles. Appl Organomet Chem 2020. [DOI: 10.1002/aoc.5826] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Rahman Bikas
- Department of Chemistry, Faculty of Science Imam Khomeini International University Qazvin 34148‐96818 Iran
| | - Fatemeh Ajormal
- Department of Chemistry, Faculty of Science University of Zanjan Zanjan 45371‐38791 Iran
| | - Nader Noshiranzadeh
- Department of Chemistry, Faculty of Science University of Zanjan Zanjan 45371‐38791 Iran
| | - Marzieh Emami
- Department of Chemistry, Faculty of Science University of Zanjan Zanjan 45371‐38791 Iran
| | - Anna Kozakiewicz
- Department of Biomedical and Polymer Chemistry, Faculty of Chemistry Nicolaus Copernicus University in Torun Torun 87‐100 Poland
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35
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Effects of carboxylic acid auxiliary ligands on the magnetic properties of azido-Cu(II) complexes: A density functional theory study. Polyhedron 2020. [DOI: 10.1016/j.poly.2020.114506] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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36
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Avdeeva VV, Malinina EA, Zhizhin KY, Kuznetsov NT. Structural Diversity of Cationic Copper(II) Complexes with Neutral Nitrogen-Containing Organic Ligands in Compounds with Boron Cluster Anions and Their Derivatives (Review). RUSS J INORG CHEM+ 2020. [DOI: 10.1134/s0036023620040026] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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37
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Singh Y, Patel R, Patel S, Jadeja R, Patel A, Patel N, Roy H, Bhagriya P, Singh R, Butcher R, Jasinski JP, Herrero S, Cortijo M. Supramolecular assemblies of new pseudohalide end-to-end bridged copper(II) complex and molecular structural variety of penta and hexa-coordinted metal(II) complexes with hydrazido-based ligand. Inorganica Chim Acta 2020. [DOI: 10.1016/j.ica.2019.119371] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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38
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Luo S, Mei H, Sun X, Zheng P. Effect of 3d heterometallic ions on the magnetic properties of azido-Cu(II) with isonicotinic acid coligands: A theoretical perspective. J Mol Graph Model 2020; 97:107562. [PMID: 32044674 DOI: 10.1016/j.jmgm.2020.107562] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2019] [Revised: 01/13/2020] [Accepted: 02/01/2020] [Indexed: 11/19/2022]
Abstract
Based on density functional theory and the broken-symmetry approach, the magnetic properties of an azido-Cu(II) complex with isonicotinic acid coligands were studied at the B1LYP/def2-TZVP level. According to the molecular magnetic orbitals and Mulliken spin population analysis, there are strong orbital interactions between the paramagnetic CuII/NiII ions and the bridging azide ligands and isonicotinic ions. The supposedly empty 4s/4p/4d orbitals of the MII ions are found to play an important role in the mechanism of magnetic coupling and are probed using NBO analysis. As the number of unpaired electrons on the MII ions increases, the number of electrons that occupy the empty 4d orbitals with the highest energy and overlap integrals of the magnetic orbitals in the CuIIMII (M = Cu, Ni, Co, Fe, Mn) model complexes increases accordingly, and the magnetic coupling constant gradually decreases.
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Affiliation(s)
- Shuchang Luo
- College of Chemical Engineering, Guizhou University of Engineering Science, Bijie, 551700, PR China.
| | - Hong Mei
- College of Chemical Engineering, Guizhou University of Engineering Science, Bijie, 551700, PR China
| | - Xiaoyuan Sun
- College of Chemical Engineering, Guizhou University of Engineering Science, Bijie, 551700, PR China
| | - Pengfei Zheng
- College of Chemical Engineering, Guizhou University of Engineering Science, Bijie, 551700, PR China
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39
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Świtlicka A, Machura B, Penkala M, Bieńko A, Bieńko DC, Titiš J, Rajnák C, Boča R, Ozarowski A. Slow magnetic relaxation in hexacoordinated cobalt(ii) field-induced single-ion magnets. Inorg Chem Front 2020. [DOI: 10.1039/d0qi00257g] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
To gain an insight into the factors affecting the enhancement of the energy barrier in SMM/SIM, hexacoordinate pseudohalide Co(ii) complexes based on the tridentate ligand were investigated.
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Affiliation(s)
- Anna Świtlicka
- Department of Crystallography
- Institute of Chemistry
- University of Silesia
- 40-006 Katowice
- Poland
| | - Barbara Machura
- Department of Crystallography
- Institute of Chemistry
- University of Silesia
- 40-006 Katowice
- Poland
| | - Mateusz Penkala
- Department of Inorganic
- Organometallic Chemistry and Catalysis
- Institute of Chemistry
- University of Silesia
- 40-006 Katowice
| | - Alina Bieńko
- Faculty of Chemistry
- University of Wroclaw
- 50-383 Wroclaw
- Poland
| | - Dariusz C. Bieńko
- Faculty of Chemistry
- Wroclaw University of Technology
- 50-370 Wroclaw
- Poland
| | - Ján Titiš
- Department of Chemistry
- Faculty of Natural Sciences
- University of SS Cyril and Methodius
- 917 01 Trnava
- Slovakia
| | - Cyril Rajnák
- Department of Chemistry
- Faculty of Natural Sciences
- University of SS Cyril and Methodius
- 917 01 Trnava
- Slovakia
| | - Roman Boča
- Department of Chemistry
- Faculty of Natural Sciences
- University of SS Cyril and Methodius
- 917 01 Trnava
- Slovakia
| | - Andrew Ozarowski
- National High Magnetic Field Laboratory
- Florida State University
- Tallahassee
- USA
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40
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Isolation of octahedral to tetrahedral cobalt-azido molecular assemblies based on cationic influence. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2019.126882] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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41
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Majumdar D, Das D, Sreejith S, Nag S, Dey S, Mondal S, Bankura K, Mishra D. Synthesis, characterizations and single crystal structure of di-nuclear azido-bridged Cd(II) coordination polymer with Schiff base precursor (H2LpentOMe): DFT, fluorescence, solvatochromism and in vitro antimicrobial assay. Inorganica Chim Acta 2019. [DOI: 10.1016/j.ica.2019.119069] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
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42
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Greenfield TJ, Takemoto T, Cano J, Lloret F, Julve M, Zubieta J, Doyle RP. A methylenediphosphonate bridged copper(II) tetramer: Synthesis, structural, thermal, and magnetic characterization of [Cu4(H2O)2(phen)4(μ-P2O6CH2)2]·21H2O. Polyhedron 2019. [DOI: 10.1016/j.poly.2019.05.022] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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43
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Azido-cobalt(II) coordination polymers exhibiting slow magnetic relaxation and metamagnetic transition. Polyhedron 2019. [DOI: 10.1016/j.poly.2019.06.034] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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44
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Pasán J, Lago AB, Cañadillas-Delgado L, Fabelo Ó, Ruiz-Pérez C, Lloret F, Julve M. Synthesis, crystal structure and magnetic properties of the cyclic tetranuclear compound [Cu4(pz)4(hppa)2(H2O)4] [pz = pyrazolate; hppa = R,S-2-hydroxo-2-phenyl-2-(1-pyrazolyl)acetate]. Polyhedron 2019. [DOI: 10.1016/j.poly.2019.05.045] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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45
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46
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Shi T, Xu Y, Zou YJ, Wang ZX. Synthesis, structure and magnetic properties of copper(ii) azide. Dalton Trans 2019; 48:11186-11190. [PMID: 31273361 DOI: 10.1039/c9dt01450k] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A novel azide-bridged copper compound without an auxiliary ligand has been synthesized and characterized by single-crystal diffraction analysis. The compound consists of 1D double chains with end-on (EO) azide bridges. Furthermore, the neighboring chains are connected by weak coordination bonds, which leads to the formation of a 3D architecture. Low-temperature magnetic measurements reveal that antiferromagnetic interactions are dominant, with concomitant spin-canted antiferromagnetism.
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Affiliation(s)
- Taqing Shi
- School of Pharmacy, Guangdong Medical University, Dongguan 523800, People's Republic of China
| | - Ye Xu
- Department of Chemistry, Centre for Supramolecular Chemistry and Catalysis, Innovative Drug Research Centre, Shanghai University, Shanghai 200444, People's Republic of China.
| | - Ya-Jing Zou
- Department of Chemistry, Centre for Supramolecular Chemistry and Catalysis, Innovative Drug Research Centre, Shanghai University, Shanghai 200444, People's Republic of China.
| | - Zhao-Xi Wang
- Department of Chemistry, Centre for Supramolecular Chemistry and Catalysis, Innovative Drug Research Centre, Shanghai University, Shanghai 200444, People's Republic of China.
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47
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Mandal D, Ray D. Different reactivity patterns for [M(trien)]2+/3+ (M = NiII and CoIII) toward azido ions: Cationic charge dependence and different mode of ligand enfolding for 1D chain formation. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2018.11.078] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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48
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Majumdar D, Dey S, Sreejith S, Biswas JK, Mondal M, Shukla P, Das S, Pal T, Das D, Bankura K, Mishra D. Syntheses, crystal structures and photo physical aspects of azido-bridged tetranuclear cadmium (II) complexes: DFT/TD-DFT, thermal, antibacterial and anti-biofilm properties. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2018.11.010] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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49
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Yue Q, Gao EQ. Azide and carboxylate as simultaneous coupler for magnetic coordination polymers. Coord Chem Rev 2019. [DOI: 10.1016/j.ccr.2018.12.002] [Citation(s) in RCA: 84] [Impact Index Per Article: 16.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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50
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Synthesis, characterization, DFT and antimicrobial studies of transition metal ion complexes of a new schiff base ligand, 5-methylpyrazole-3yl-N-(2́-hydroxyphenylamine)methyleneimine, (MPzOAP). J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2018.09.095] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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