1
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Chen Q, Zhu K. Advancements and strategic approaches in catenane synthesis. Chem Soc Rev 2024; 53:5677-5703. [PMID: 38659402 DOI: 10.1039/d3cs00499f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/26/2024]
Abstract
Catenanes, a distinctive category of mechanically interlocked molecules composed of intertwined macrocycles, have undergone significant advancements since their initial stages characterized by inefficient statistical synthesis methods. Through the aid of molecular recognition processes and principles of self-assembly, a diverse array of catenanes with intricate structures can now be readily accessed utilizing template-directed synthetic protocols. The rapid evolution and emergence of this field have catalyzed the design and construction of artificial molecular switches and machines, leading to the development of increasingly integrated functional systems and materials. This review endeavors to explore the pivotal advancements in catenane synthesis from its inception, offering a comprehensive discussion of the synthetic methodologies employed in recent years. By elucidating the progress made in synthetic approaches to catenanes, our aim is to provide a clearer understanding of the future challenges in further advancing catenane chemistry from a synthetic perspective.
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Affiliation(s)
- Qing Chen
- School of Chemistry, Sun Yat-Sen University, Guangzhou, 510275, China.
| | - Kelong Zhu
- School of Chemistry, Sun Yat-Sen University, Guangzhou, 510275, China.
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2
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Ma C, Li S, Zeng Y, Lyu Y. DNA-Based Molecular Machines: Controlling Mechanisms and Biosensing Applications. BIOSENSORS 2024; 14:236. [PMID: 38785710 PMCID: PMC11117991 DOI: 10.3390/bios14050236] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/03/2024] [Revised: 04/26/2024] [Accepted: 05/06/2024] [Indexed: 05/25/2024]
Abstract
The rise of DNA nanotechnology has driven the development of DNA-based molecular machines, which are capable of performing specific operations and tasks at the nanoscale. Benefitting from the programmability of DNA molecules and the predictability of DNA hybridization and strand displacement, DNA-based molecular machines can be designed with various structures and dynamic behaviors and have been implemented for wide applications in the field of biosensing due to their unique advantages. This review summarizes the reported controlling mechanisms of DNA-based molecular machines and introduces biosensing applications of DNA-based molecular machines in amplified detection, multiplex detection, real-time monitoring, spatial recognition detection, and single-molecule detection of biomarkers. The challenges and future directions of DNA-based molecular machines in biosensing are also discussed.
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Affiliation(s)
- Chunran Ma
- Molecular Science and Biomedicine Laboratory (MBL), State Key Laboratory of Chemo/Biosensing and Chemometrics, College of Chemistry and Chemical Engineering, Aptamer Engineering Center of Hunan Province, Hunan University, Changsha 410082, China; (C.M.); (S.L.); (Y.Z.)
| | - Shiquan Li
- Molecular Science and Biomedicine Laboratory (MBL), State Key Laboratory of Chemo/Biosensing and Chemometrics, College of Chemistry and Chemical Engineering, Aptamer Engineering Center of Hunan Province, Hunan University, Changsha 410082, China; (C.M.); (S.L.); (Y.Z.)
| | - Yuqi Zeng
- Molecular Science and Biomedicine Laboratory (MBL), State Key Laboratory of Chemo/Biosensing and Chemometrics, College of Chemistry and Chemical Engineering, Aptamer Engineering Center of Hunan Province, Hunan University, Changsha 410082, China; (C.M.); (S.L.); (Y.Z.)
| | - Yifan Lyu
- Molecular Science and Biomedicine Laboratory (MBL), State Key Laboratory of Chemo/Biosensing and Chemometrics, College of Chemistry and Chemical Engineering, Aptamer Engineering Center of Hunan Province, Hunan University, Changsha 410082, China; (C.M.); (S.L.); (Y.Z.)
- Furong Laboratory, Changsha 410082, China
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3
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Bąk KM, Trzaskowski B, Chmielewski MJ. Anion-templated synthesis of a switchable fluorescent [2]catenane with sulfate sensing capability. Chem Sci 2024; 15:1796-1809. [PMID: 38303949 PMCID: PMC10829038 DOI: 10.1039/d3sc05086f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2023] [Accepted: 12/16/2023] [Indexed: 02/03/2024] Open
Abstract
Anion templation strategies have facilitated the synthesis of various catenane and rotaxane hosts capable of strong and selective binding of anions in competitive solvents. However, this approach has primarily relied on positively charged precursors, limiting the structural diversity and the range of potential applications of the anion-templated mechanically interlocked molecules. Here we demonstrate the synthesis of a rare electroneutral [2]catenane using a powerful, doubly charged sulfate template and a complementary diamidocarbazole-based hydrogen bonding precursor. Owing to the unique three-dimensional hydrogen bonding cavity and the embedded carbazole fluorophores, the resulting catenane receptor functions as a sensitive fluorescent turn-ON sensor for the highly hydrophilic sulfate, even in the presence of a large excess of water. Importantly, the [2]catenane exhibits enhanced binding affinity and selectivity for sulfate over its parent macrocycle and other acyclic diamidocarbazole-based receptors. We demonstrate also, for the first time, that the co-conformation of the catenane may be controlled by reversible acid/base induced protonation and deprotonation of the anionic template, SO42-. This approach pioneers a new strategy to induce molecular motion of interlocked components using switchable anionic templates.
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Affiliation(s)
- Krzysztof M Bąk
- Faculty of Chemistry, Biological and Chemical Research Centre, University of Warsaw Żwirki i Wigury 101 02-089 Warsaw Poland
| | - Bartosz Trzaskowski
- Centre of New Technologies, University of Warsaw Banacha 2c 02-097 Warsaw Poland
| | - Michał J Chmielewski
- Faculty of Chemistry, Biological and Chemical Research Centre, University of Warsaw Żwirki i Wigury 101 02-089 Warsaw Poland
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4
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Puigcerver J, Alajarin M, Martinez-Cuezva A, Berna J. Modulating the shuttling motion of [2]rotaxanes built of p-xylylenediamine units through permethylation at the benzylic positions of the ring. Org Biomol Chem 2023; 21:9070-9075. [PMID: 37938860 DOI: 10.1039/d3ob01611k] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2023]
Abstract
In this study, we show the effect of the gem-dimethyl substitution at the four benzylic carbons of the ring on the internal dynamics of two-station [2]rotaxanes. Such structural modification of the polyamide macrocycles promotes a drastic change of the internal dynamics as shown by variable-temperature (VT) 1H NMR experiments. We determined that the shuttling rates of the octamethylated macrocycle along a series of symmetrical threads were significantly faster compared to the non-substituted ring. This effect was particularly pronounced in the fumaramide-based system, in which the rate was 27 times faster than that of the model system.
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Affiliation(s)
- Julio Puigcerver
- Departamento de Química Orgánica, Facultad de Química, Regional Campus of International Excellence "Campus Mare Nostrum", Universidad de Murcia, E-30100 Murcia, Spain.
| | - Mateo Alajarin
- Departamento de Química Orgánica, Facultad de Química, Regional Campus of International Excellence "Campus Mare Nostrum", Universidad de Murcia, E-30100 Murcia, Spain.
| | - Alberto Martinez-Cuezva
- Departamento de Química Orgánica, Facultad de Química, Regional Campus of International Excellence "Campus Mare Nostrum", Universidad de Murcia, E-30100 Murcia, Spain.
| | - Jose Berna
- Departamento de Química Orgánica, Facultad de Química, Regional Campus of International Excellence "Campus Mare Nostrum", Universidad de Murcia, E-30100 Murcia, Spain.
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5
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Jensen SK, Neumann MS, Frederiksen R, Skavenborg ML, Larsen MC, Wessel SE, Jeppesen JO. Mechanistic studies of isomeric [2]rotaxanes consisting of two different tetrathiafulvalene units reveal that the movement of cyclobis(paraquat- p-phenylene) can be controlled. Chem Sci 2023; 14:12366-12378. [PMID: 37969595 PMCID: PMC10631196 DOI: 10.1039/d3sc04408d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2023] [Accepted: 10/23/2023] [Indexed: 11/17/2023] Open
Abstract
Controlling the movement in artificial molecular machines is a key challenge that needs to be solved before their full potential can be harnessed. In this study, two isomeric tri-stable [2]rotaxanes 1·4PF6 and 2·4PF6 incorporating both a tetrathiafulvalene (TTF) and a monopyrrolotetrathiafulvalene (MPTTF) unit in the dumbbell component have been synthesised to measure the energy barriers when the tetracationic cyclobis(paraquat-p-phenylene) (CBPQT4+) ring moves across either a TTF2+ or an MPTTF2+ dication. By strategically exchanging one of the thiomethyl barriers on either the TTF unit or the MPTTF unit with the bulkier thioethyl group, the movement of the CBPQT4+ ring in 14+ and 24+ can be controlled to take place in only one direction upon tetra-oxidation. Cyclic voltammetry and 1H NMR spectroscopy were used to investigate the switching mechanism and it was found that upon tetra-oxidation of 14+ and 24+, the CBPQT4+ ring moves first to a position where it is located between the TTF2+ and MPTTF2+ dications producing high-energy co-conformations which slowly interconvert into thermodynamically more stable co-conformations. The kinetics of the movement occurring in the tetra-oxidised [2]rotaxanes 18+ and 28+ were studied at different temperatures allowing the free energy of the transition state, when CBPQT4+ moves across TTF2+ (21.5 kcal mol-1) and MPTTF2+ (20.3 kcal mol-1) at 298 K, to be determined. These results demonstrate for the first time that the combination of a TTF and an MPTTF unit can be used to induce directional movement of the CBPQT4+ ring in molecular machines with a 90% efficiency.
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Affiliation(s)
- Sofie K Jensen
- Department of Physics, Chemistry and Pharmacy, University of Southern Denmark, Campusvej 55 5230 Odense Denmark
| | - Mathias S Neumann
- Department of Physics, Chemistry and Pharmacy, University of Southern Denmark, Campusvej 55 5230 Odense Denmark
| | - Rikke Frederiksen
- Department of Physics, Chemistry and Pharmacy, University of Southern Denmark, Campusvej 55 5230 Odense Denmark
| | - Mathias L Skavenborg
- Department of Physics, Chemistry and Pharmacy, University of Southern Denmark, Campusvej 55 5230 Odense Denmark
| | - Mads C Larsen
- Department of Physics, Chemistry and Pharmacy, University of Southern Denmark, Campusvej 55 5230 Odense Denmark
| | - Stinne E Wessel
- Department of Physics, Chemistry and Pharmacy, University of Southern Denmark, Campusvej 55 5230 Odense Denmark
| | - Jan O Jeppesen
- Department of Physics, Chemistry and Pharmacy, University of Southern Denmark, Campusvej 55 5230 Odense Denmark
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6
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Hum G, Phang SJI, Ong HC, León F, Quek S, Khoo YXJ, Li C, Li Y, Clegg JK, Díaz J, Stuparu MC, García F. Main Group Molecular Switches with Swivel Bifurcated to Trifurcated Hydrogen Bond Mode of Action. J Am Chem Soc 2023. [PMID: 37267593 DOI: 10.1021/jacs.2c12713] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
Artificial molecular machines have captured the full attention of the scientific community since Jean-Pierre Sauvage, Fraser Stoddart, and Ben Feringa were awarded the 2016 Nobel Prize in Chemistry. The past and current developments in molecular machinery (rotaxanes, rotors, and switches) primarily rely on organic-based compounds as molecular building blocks for their assembly and future development. In contrast, the main group chemical space has not been traditionally part of the molecular machine domain. The oxidation states and valency ranges within the p-block provide a tremendous wealth of structures with various chemical properties. Such chemical diversity─when implemented in molecular machines─could become a transformative force in the field. Within this context, we have rationally designed a series of NH-bridged acyclic dimeric cyclodiphosphazane species, [(μ-NH){PE(μ-NtBu)2PE(NHtBu)}2] (E = O and S), bis-PV2N2, displaying bimodal bifurcated R21(8) and trifurcated R31(8,8) hydrogen bonding motifs. The reported species reversibly switch their topological arrangement in the presence and absence of anions. Our results underscore these species as versatile building blocks for molecular machines and switches, as well as supramolecular chemistry and crystal engineering based on cyclophosphazane frameworks.
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Affiliation(s)
- Gavin Hum
- School of Chemistry, Chemical Engineering & Biotechnology, Nanyang Technological University, 21 Nanyang Link, 637371 Singapore, Singapore
| | - Si Jia Isabel Phang
- School of Chemistry, Chemical Engineering & Biotechnology, Nanyang Technological University, 21 Nanyang Link, 637371 Singapore, Singapore
| | - How Chee Ong
- School of Chemistry, Chemical Engineering & Biotechnology, Nanyang Technological University, 21 Nanyang Link, 637371 Singapore, Singapore
| | - Felix León
- School of Chemistry, Chemical Engineering & Biotechnology, Nanyang Technological University, 21 Nanyang Link, 637371 Singapore, Singapore
| | - Shina Quek
- School of Chemistry, Chemical Engineering & Biotechnology, Nanyang Technological University, 21 Nanyang Link, 637371 Singapore, Singapore
| | - Yi Xin Joycelyn Khoo
- School of Chemistry, Chemical Engineering & Biotechnology, Nanyang Technological University, 21 Nanyang Link, 637371 Singapore, Singapore
| | - Chenfei Li
- School of Chemistry, Chemical Engineering & Biotechnology, Nanyang Technological University, 21 Nanyang Link, 637371 Singapore, Singapore
| | - Yongxin Li
- School of Chemistry, Chemical Engineering & Biotechnology, Nanyang Technological University, 21 Nanyang Link, 637371 Singapore, Singapore
| | - Jack K Clegg
- School of Chemistry and Molecular Biosciences, The University of Queensland, Cooper Road, St Lucia 4072, Queensland, Australia
| | - Jesús Díaz
- Departamento de Química Orgánica e Inorgánica, Facultad de Veterinaria Extremadura, Avda de la Universidad s/n, Cáceres 10003, Spain
| | - Mihaiela C Stuparu
- School of Chemistry, Chemical Engineering & Biotechnology, Nanyang Technological University, 21 Nanyang Link, 637371 Singapore, Singapore
| | - Felipe García
- Departamento de Química Orgánica e Inorgánica, Facultad de Química, Universidad de Oviedo, Julián Claveria 8, Oviedo 33006, Asturias, Spain
- School of Chemistry, Monash University, Clayton 3800, Victoria, Australia
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7
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Trung NT, Nhien PQ, Kim Cuc TT, Wu CH, Buu Hue BT, Wu JI, Li YK, Lin HC. Controllable Aggregation-Induced Emission and Förster Resonance Energy Transfer Behaviors of Bistable [ c2] Daisy Chain Rotaxanes for White-Light Emission and Temperature-Sensing Applications. ACS APPLIED MATERIALS & INTERFACES 2023; 15:15353-15366. [PMID: 36926804 DOI: 10.1021/acsami.2c21671] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/18/2023]
Abstract
Bistable [c2] daisy chain rotaxanes with respective extended and contracted forms of [c2]A and [c2]B containing a blue-emissive anthracene (AN) donor and orange-emissive indandione-carbazole (IC) acceptor were successfully synthesized via click reaction. Tunable-emission bistable [c2] daisy chain rotaxanes with fluorescence changes from blue to orange, including bright-white-light emissions, could be modulated by the aggregation-induced emission (AIE) characteristics and Förster resonance energy transfer (FRET) processes through altering water fractions and shuttling processes (i.e., acid/base controls). Accordingly, as a result of excellent fine-tuning AIE (at 60% water content of H2O/THF) and FRET (with a compatible energy transfer of EFRET = 33.2%) behaviors after the shuttling process (by adding base), the brightest white-light emission at CIE (0.31, 0.37) with a quantum yield of Φ = 15.64% was obtained in contracted [c2]B with good control of molecular shuttling to possess higher photoluminescence (PL) quantum yields and better energy transfer efficiencies (i.e., the manipulation of reduced PET and enhanced FRET processes) due to their intramolecular aggregations of blue AN donors and orange IC acceptors with a proper water content of 60% H2O. Furthermore, dynamic light-scattering (DLS) and time-resolved photoluminescence (TRPL) measurements, along with theoretical calculations, were utilized to investigate and confirm AIE and FRET phenomena of bistable [c2] daisy chain rotaxanes. Especially, both bistable [c2] daisy chain rotaxanes [c2]A and [c2]B and noninterlocked monomer M could be exploited for the applications of ratiometric fluorescence temperature sensing due to the temperature effects on the AIE and FRET features. Based on these desirable bistable [c2] daisy chain rotaxane structures, this work provides a potential strategy for the future applications of tunable multicolor emission and ratiometric fluorescence temperature-sensing materials.
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Affiliation(s)
- Nguyen Thanh Trung
- Department of Materials Science and Engineering, National Yang Ming Chiao Tung University, Hsinchu 300, Taiwan
| | - Pham Quoc Nhien
- Department of Materials Science and Engineering, National Yang Ming Chiao Tung University, Hsinchu 300, Taiwan
- Department of Chemistry, College of Natural Sciences, Can Tho University, Can Tho City, Viet Nam
| | - Tu Thi Kim Cuc
- Department of Materials Science and Engineering, National Yang Ming Chiao Tung University, Hsinchu 300, Taiwan
| | - Chia-Hua Wu
- Department of Materials Science and Engineering, National Yang Ming Chiao Tung University, Hsinchu 300, Taiwan
| | - Bui Thi Buu Hue
- Department of Chemistry, College of Natural Sciences, Can Tho University, Can Tho City, Viet Nam
| | - Judy I Wu
- Department of Chemistry, University of Houston, Houston, Texas 77204, United States
| | - Yaw-Kuen Li
- Department of Applied Chemistry, National Yang Ming Chiao Tung University, Hsinchu 300, Taiwan
- Center for Emergent Functional Matter Science, National Yang Ming Chiao Tung University, Hsinchu 300, Taiwan
| | - Hong-Cheu Lin
- Department of Materials Science and Engineering, National Yang Ming Chiao Tung University, Hsinchu 300, Taiwan
- Center for Emergent Functional Matter Science, National Yang Ming Chiao Tung University, Hsinchu 300, Taiwan
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8
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Saura‐Sanmartin A, Schalley CA. The Mobility of Homomeric Lasso‐ and Daisy Chain‐Like Rotaxanes in Solution and in the Gas Phase as a means to Study Structure and Switching Behaviour. Isr J Chem 2023. [DOI: 10.1002/ijch.202300022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/17/2023]
Affiliation(s)
- Adrian Saura‐Sanmartin
- Departamento de Química Orgánica Facultad de Química Universidad de Murcia Calle Campus Universitario, 5 30100 Murcia Spain
- Institut für Chemie und Biochemie Freie Universität Berlin Arnimallee 20 14195 Berlin Germany
| | - Christoph A. Schalley
- Institut für Chemie und Biochemie Freie Universität Berlin Arnimallee 20 14195 Berlin Germany
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9
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Kundu S, Valiyev I, Mondal D, Rajasekaran VV, Goswami A, Schmittel M. Proton transfer network with luminescence display controls OFF/ON catalysis that generates a high-speed slider-on-deck. RSC Adv 2023; 13:5168-5171. [PMID: 36777932 PMCID: PMC9909384 DOI: 10.1039/d3ra00062a] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2023] [Accepted: 01/23/2023] [Indexed: 02/11/2023] Open
Abstract
A three-component network for OFF/ON catalysis was built from a protonated nanoswitch and a luminophore. Its activation by addition of silver(i) triggered the proton-catalyzed formation of a biped and the assembly of a fast slider-on-deck (k 298 = 540 kHz).
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Affiliation(s)
- Sohom Kundu
- Center of Micro and Nanochemistry and (Bio)Technology, Organische Chemie I, Universität Siegen Adolf-Reichwein-Str. 2 D-57068 Siegen Germany +49 2717404356
| | - Isa Valiyev
- Center of Micro and Nanochemistry and (Bio)Technology, Organische Chemie I, Universität Siegen Adolf-Reichwein-Str. 2 D-57068 Siegen Germany +49 2717404356
| | - Debabrata Mondal
- Center of Micro and Nanochemistry and (Bio)Technology, Organische Chemie I, Universität Siegen Adolf-Reichwein-Str. 2 D-57068 Siegen Germany +49 2717404356
| | - Vishnu Verman Rajasekaran
- Center of Micro and Nanochemistry and (Bio)Technology, Organische Chemie I, Universität Siegen Adolf-Reichwein-Str. 2 D-57068 Siegen Germany +49 2717404356
| | - Abir Goswami
- Center of Micro and Nanochemistry and (Bio)Technology, Organische Chemie I, Universität Siegen Adolf-Reichwein-Str. 2 D-57068 Siegen Germany +49 2717404356
| | - Michael Schmittel
- Center of Micro and Nanochemistry and (Bio)Technology, Organische Chemie I, Universität Siegen Adolf-Reichwein-Str. 2 D-57068 Siegen Germany +49 2717404356
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10
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Wootten MM, Tshepelevitsh S, Leito I, Clayden J. A Chemically Fuelled Molecular Automaton Displaying Programmed Migration of Zn 2+ Between Alternative Binding Sites. Chemistry 2022; 28:e202202247. [PMID: 35880579 PMCID: PMC9804598 DOI: 10.1002/chem.202202247] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2022] [Indexed: 01/05/2023]
Abstract
A molecular system comprising a cationic zinc complex and an amino acid-derived ambident ligand having phosphate and carboxylate binding sites undergoes a series of rearrangements in which the metal cation migrates autonomously from one site to another. The location of the metal is identified by the circular dichroism spectrum of a ligated bis(2-quinolylmethyl)-(2-pyridylmethyl)amine (BQPA) chromophore, which takes a characteristic shape at each binding site. Migration is fuelled by the decomposition of trichloroacetic acid to CO2 and CHCl3 , which progressively neutralises the acidity of the system as a function of time, revealing in sequence binding sites of increasing basicity. The migration rate responds to control by variation of the temperature, water content and triethylamine concentration, while an excess of fuel controls the duration of an induction period before the migration event.
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Affiliation(s)
- Matthew M Wootten
- School of Chemistry, University of Bristol, Cantock's Close, Bristol, BS8 1TS, UK
| | - Sofja Tshepelevitsh
- Institute of Chemistry, University of Tartu, Ravila 14a, Tartu, 50411, Estonia
| | - Ivo Leito
- Institute of Chemistry, University of Tartu, Ravila 14a, Tartu, 50411, Estonia
| | - Jonathan Clayden
- School of Chemistry, University of Bristol, Cantock's Close, Bristol, BS8 1TS, UK
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11
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Sacristán-Martín A, Miguel D, Barbero H, Álvarez CM. Self-Resetting Bistable Redox Molecular Machines for Fullerene Recognition. Org Lett 2022; 24:5879-5883. [PMID: 35905434 PMCID: PMC9400385 DOI: 10.1021/acs.orglett.2c01856] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
![]()
Addressing control over molecular machines resulting
in variable
output modulation by mimicking nature mechanisms is a current hot
topic. The exploitation of reversibility in thiol/disulfide motifs
in chemical systems flanked by nonplanar corannulene moieties capable
to recognize fullerenes is presented herein. Two redox-based machines
have been conceived for this purpose: an ON/OFF switch that activates
its binding properties upon dimerization and a self-resetting (i.e.,
with an automated backward process) host that substantially modulates
its affinity.
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Affiliation(s)
- Adriana Sacristán-Martín
- GIR MIOMeT, IU CINQUIMA/Química Inorgánica, Facultad de Ciencias, Universidad de Valladolid, Valladolid E47011, Spain
| | - Daniel Miguel
- GIR MIOMeT, IU CINQUIMA/Química Inorgánica, Facultad de Ciencias, Universidad de Valladolid, Valladolid E47011, Spain
| | - Héctor Barbero
- GIR MIOMeT, IU CINQUIMA/Química Inorgánica, Facultad de Ciencias, Universidad de Valladolid, Valladolid E47011, Spain
| | - Celedonio M Álvarez
- GIR MIOMeT, IU CINQUIMA/Química Inorgánica, Facultad de Ciencias, Universidad de Valladolid, Valladolid E47011, Spain
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12
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Coutrot F, Waelès P, Gauthier M. Study of [2] and [3]Rotaxanes Obtained by Post‐Synthetic Aminolysis of a Kinetically Stable Though Activated Carbonate‐Containing Pseudorotaxane. European J Org Chem 2022. [DOI: 10.1002/ejoc.202101385] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Frédéric Coutrot
- Institut des Biomolecules Max Mousseron Département de Chimie Montpellier FRANCE
| | - Philip Waelès
- IBMM: Institut des Biomolecules Max Mousseron chimie FRANCE
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13
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Interface Asymmetry Induced and Surface Pressure Controlled Valence Tautomerism in Monolayers of bis-Phthalocyaninates of Lanthanides. Symmetry (Basel) 2022. [DOI: 10.3390/sym14020340] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
Supramolecular systems based on transition metal complexes capable of reversible redox isomerization due to intramolecular electron transfer are one of the most interesting objects from the viewpoint of molecular switches’ design. In the present work, a comparative analysis of valence transformation of lanthanide complexes (Sm, Er, Tm and Yb) with donor-substituted bis-phthalocyaninates occurring during the formation and compression–extension of Langmuir monolayers was carried out using data of UV–Vis–NIR spectroscopy. It is shown that the numerical values of the Q-band positions in the absorption spectra for the extended monolayers of the complexes under study depend linearly on the ionic radius of the metal center, if the metals have an oxidation state of +2. This makes it possible to draw a direct analogy between the behavior of the studied compounds and analogous europium and cerium complexes, for which direct evidence of the valence tautomerism in such planar systems was obtained earlier. This led to the conclusion that the intramolecular electron transfer from the phthalocyanine ligand to the central metal ion [Ln3+(R4Pc2‑)(R4Pc•−)]0 → [Ln2+(R4Pc•−)2]0 occurs when solutions of donor-substituted bis-phthalocyaninates of samarium, erbium, thulium, and ytterbium are deposited onto the water subphase, and the reverse redox-isomeric transition is observed in most cases when the monolayer is compressed to high surface pressures. The first of these switches is related to the asymmetry of the air/water interface, and the second one is controlled by the lateral compression–expansion of the monolayer. It has been demonstrated that when bis-phthalocyanine monolayers of lanthanides with variable valence are transferred to solid substrates, the valence state of the metal center, and consequently, the redox-isomeric state of the complex, do not change. This means that we are able to form films with a predetermined state of the complex. Note that the redox-isomeric state of complexes should affect the entire range of physicochemical properties of such films.
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14
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Nazarova A, Padnya P, Cragg PJ, Stoikov I. [1]Rotaxanes based on phosphorylated pillar[5]arenes. NEW J CHEM 2022. [DOI: 10.1039/d1nj05461a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
[1]Rotaxanes based on monosubstituted phosphorus-containing pillar[5]arenes have been synthesized by the Kabachnik–Fields reaction for the first time in good yields.
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Affiliation(s)
- Anastasia Nazarova
- A. M. Butlerov Chemical Institute, Kazan Federal University, Kremlevskaya, 18, Kazan 420008, Russian Federation
| | - Pavel Padnya
- A. M. Butlerov Chemical Institute, Kazan Federal University, Kremlevskaya, 18, Kazan 420008, Russian Federation
| | - Peter J. Cragg
- School of Applied Sciences, University of Brighton, Brighton BN2 4GJ, UK
| | - Ivan Stoikov
- A. M. Butlerov Chemical Institute, Kazan Federal University, Kremlevskaya, 18, Kazan 420008, Russian Federation
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Saura-Sanmartin A, Pastor A, Martinez-Cuezva A, Berna J. Maximizing the [ c2]daisy chain to lasso ratio through competitive self-templating clipping reactions. Chem Commun (Camb) 2021; 58:290-293. [PMID: 34881747 DOI: 10.1039/d1cc05942d] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Self-templating two-component coupling reactions allowed the isolation of two threaded products with different molecular sizes: a lasso-type [1]rotaxane and a [c2]daisy chain rotaxane. Their distribution in the final reaction mixture varies as a factor of the concentration of the reactants. Through this methodology we obtained a large 84-membered cyclic multistation [2]rotaxane.
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Affiliation(s)
- Adrian Saura-Sanmartin
- Departamento de Química Orgánica, Facultad de Química, Regional Campus of International Excellence "Campus Mare Nostrum", Universidad de Murcia, E-30100, Murcia, Spain.
| | - Aurelia Pastor
- Departamento de Química Orgánica, Facultad de Química, Regional Campus of International Excellence "Campus Mare Nostrum", Universidad de Murcia, E-30100, Murcia, Spain.
| | - Alberto Martinez-Cuezva
- Departamento de Química Orgánica, Facultad de Química, Regional Campus of International Excellence "Campus Mare Nostrum", Universidad de Murcia, E-30100, Murcia, Spain.
| | - Jose Berna
- Departamento de Química Orgánica, Facultad de Química, Regional Campus of International Excellence "Campus Mare Nostrum", Universidad de Murcia, E-30100, Murcia, Spain.
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Gauthier M, Coutrot F. Weinreb Amide, Ketone and Amine as Potential and Competitive Secondary Molecular Stations for Dibenzo-[24]Crown-8 in [2]Rotaxane Molecular Shuttles. Chemistry 2021; 27:17576-17580. [PMID: 34738683 DOI: 10.1002/chem.202103805] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2021] [Indexed: 01/05/2023]
Abstract
This paper reports the synthesis and study of new pH-sensitive DB24C8-based [2]rotaxane molecular shuttles that contain within their axle four potential sites of interaction for the DB24C8: ammonium, amine, Weinreb amide, and ketone. In the protonated state, the DB24C8 lay around the best ammonium site. After either deprotonation or deprotonation-then-carbamoylation of the ammonium, different localizations of the DB24C8 were seen, depending on both the number and nature of the secondary stations and steric restriction. Unexpectedly, the results indicated that the Weinreb amide was not a proper secondary molecular station for the DB24C8. Nevertheless, through its methoxy side chain, it slowed down the shuttling of the macrocycle along the threaded axle, thereby partitioning the [2]rotaxane into two translational isomers on the NMR timescale. The ketone was successfully used as a secondary molecular station, and its weak affinity for the DB24C8 was similar to that of a secondary amine.
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Affiliation(s)
- Maxime Gauthier
- Supramolecular Machines and Architectures Team, IBMM, Univ Montpellier, CNRS, ENSCM, Montpellier, France
| | - Frédéric Coutrot
- Supramolecular Machines and Architectures Team, IBMM, Univ Montpellier, CNRS, ENSCM, Montpellier, France
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