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Gebhardt J, Kiesel M, Riniker S, Hansen N. Combining Molecular Dynamics and Machine Learning to Predict Self-Solvation Free Energies and Limiting Activity Coefficients. J Chem Inf Model 2020; 60:5319-5330. [DOI: 10.1021/acs.jcim.0c00479] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Julia Gebhardt
- Institute of Thermodynamics and Thermal Process Engineering, University of Stuttgart, D-70569 Stuttgart, Germany
| | - Matthias Kiesel
- Institute of Thermodynamics and Thermal Process Engineering, University of Stuttgart, D-70569 Stuttgart, Germany
| | - Sereina Riniker
- Laboratory of Physical Chemistry, ETH Zürich, Vladimir-Prelog-Weg 2, 8093 Zürich, Switzerland
| | - Niels Hansen
- Institute of Thermodynamics and Thermal Process Engineering, University of Stuttgart, D-70569 Stuttgart, Germany
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2
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Jiang P, Wu H, Qing L, Xu X, Jin Z, Yang L, Zhao S. Wetting Transition of Ionic Substrate by Modulating Surface Charge Distribution. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2020; 36:3667-3675. [PMID: 32160749 DOI: 10.1021/acs.langmuir.9b03933] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Surface wettability regulation plays a crucial role in antifouling and related applications. For regulating surface wettability, one of the effective approaches is to modulate the surface charge distribution. Herein, we report a theoretical study for unraveling the mechanistic relation between surface charge distribution and ionic substrate wettability. Specifically, acetonitrile liquids at ambient condition in contact with various ionic substrates are considered. At different surface charge distributions, the interfacial thermodynamic properties are investigated by means of molecular density functional theory. We find that the variation of the spatial interval among the discrete charges strongly alters the substrate-acetonitrile interaction and leads to an oscillation in the interfacial tension, indicating that the substrate can be tuned from a solvophobic one to a solvophilic one. This trend can be further enhanced by increasing the charge quantity. The underlying mechanisms are extensively discussed and expatiated. Our work provides theoretical guidance to engineer and regulate surface wettability.
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Affiliation(s)
- Peng Jiang
- Key Laboratory of Green Chemical Process of Ministry of Education, Key Laboratory of Novel Reactor and Green Chemical Technology of Hubei Province, School of Chemical Engineering and Pharmacy, Wuhan Institute of Technology, Wuhan 430205, China
- State Key Laboratory of Chemical Engineering, School of Chemical Engineering, East China University of Science and Technology, Shanghai 200237, China
| | - Hongguan Wu
- State Key Laboratory of Chemical Engineering, School of Chemical Engineering, East China University of Science and Technology, Shanghai 200237, China
| | - Leying Qing
- State Key Laboratory of Chemical Engineering, School of Chemical Engineering, East China University of Science and Technology, Shanghai 200237, China
| | - Xiaofei Xu
- State Key Laboratory of Chemical Engineering, School of Chemical Engineering, East China University of Science and Technology, Shanghai 200237, China
| | - Zhehui Jin
- School of Mining and Petroleum Engineering, Department of Civil and Environmental Engineering, University of Alberta, Edmonton, Alberta T6G 1H9, Canada
| | - Li Yang
- Key Laboratory of Green Chemical Process of Ministry of Education, Key Laboratory of Novel Reactor and Green Chemical Technology of Hubei Province, School of Chemical Engineering and Pharmacy, Wuhan Institute of Technology, Wuhan 430205, China
| | - Shuangliang Zhao
- State Key Laboratory of Chemical Engineering, School of Chemical Engineering, East China University of Science and Technology, Shanghai 200237, China
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3
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Qing L, Tao J, Yu H, Jiang P, Qiao C, Zhao S, Liu H. A molecular model for ion dehydration in confined water. AIChE J 2020. [DOI: 10.1002/aic.16938] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Leying Qing
- State Key Laboratory of Chemical Engineering and School of Chemical EngineeringEast China University of Science and Technology Shanghai China
| | - Jiabo Tao
- State Key Laboratory of Chemical Engineering and School of Chemical EngineeringEast China University of Science and Technology Shanghai China
| | - Hongping Yu
- State Key Laboratory of Chemical Engineering and School of Chemical EngineeringEast China University of Science and Technology Shanghai China
| | - Peng Jiang
- Key Laboratory for Green Chemical Process of Ministry of Education, School of Chemical Engineering and PharmacyWuhan Institute of Technology Wuhan China
| | - Chongzhi Qiao
- State Key Laboratory of Chemical Engineering and School of Chemical EngineeringEast China University of Science and Technology Shanghai China
| | - Shuangliang Zhao
- State Key Laboratory of Chemical Engineering and School of Chemical EngineeringEast China University of Science and Technology Shanghai China
| | - Honglai Liu
- School of Chemistry and Molecular EngineeringEast China University of Science and Technology Shanghai China
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4
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Anomalous changes of intermolecular distance in aqueous electrolytes in narrow pores of carbon nanotubes. ADSORPTION 2019. [DOI: 10.1007/s10450-019-00082-w] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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5
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Wu H, Li Y, Kadirov D, Zhao S, Lu X, Liu H. Efficient Molecular Approach to Quantifying Solvent-Mediated Interactions. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2017; 33:11817-11824. [PMID: 28937769 DOI: 10.1021/acs.langmuir.7b02629] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
The solvent-mediated interaction, or equivalently the depletion force, play a pivotal role in the processes, by which two objects in solution such as lock and key particles, antibody and antigen, macromolecule and substrate, are attracted to each other. The quantification of this interaction is important yet challenging since it depends on the microscopic solvent structure in the surrounding. Here, we report an efficient molecular approach for predicting the solvent-mediated interaction by combining the classical density functional theory with a reversible solvation thermodynamic circle. For demonstration, the solvent-mediated interactions between two nanoparticles and between a nanoparticle and a rough wall are examined, and good agreements compared with the simulation results are illustrated. This approach is thereafter employed to interpret the reported self-assembly phenomena of lock and key colloidal particles. We show that the binding probability between the lock and key colloids can be successfully characterized at different depletant concentrations and system temperatures. This approach provides a potential route for identifying the coarse-graining interaction between two objects in fluid systems.
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Affiliation(s)
| | | | | | | | - Xiaohua Lu
- State Key Laboratory of Materials-Oriented Chemical Engineering, Nanjing Tech University , Nanjing 210009, P. R. China
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6
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Ding L, Levesque M, Borgis D, Belloni L. Efficient molecular density functional theory using generalized spherical harmonics expansions. J Chem Phys 2017; 147:094107. [DOI: 10.1063/1.4994281] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023] Open
Affiliation(s)
- Lu Ding
- Maison de la Simulation, USR 3441 CNRS-CEA-Université Paris-Saclay, 91191 Gif-sur-Yvette, France
| | - Maximilien Levesque
- PASTEUR, Département de Chimie, École Normale Supérieure, UPMC Univ. Paris 06, CNRS, PSL Research University, 75005 Paris, France
- Sorbonne Universités, UPMC Univ. Paris 06, École Normale Supérieure, CNRS, Processus d’Activation Sélective par Transfert d’Énergie Uni-Électronique ou Radiatif (PASTEUR), 75005 Paris, France
| | - Daniel Borgis
- Maison de la Simulation, USR 3441 CNRS-CEA-Université Paris-Saclay, 91191 Gif-sur-Yvette, France
- PASTEUR, Département de Chimie, École Normale Supérieure, UPMC Univ. Paris 06, CNRS, PSL Research University, 75005 Paris, France
- Sorbonne Universités, UPMC Univ. Paris 06, École Normale Supérieure, CNRS, Processus d’Activation Sélective par Transfert d’Énergie Uni-Électronique ou Radiatif (PASTEUR), 75005 Paris, France
| | - Luc Belloni
- LIONS, NIMBE, CEA, CNRS, Université Paris-Saclay, 91191 Gif-sur-Yvette, France
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7
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Sheng S, Miller M, Wu J. Molecular Theory of Hydration at Different Temperatures. J Phys Chem B 2017; 121:6898-6908. [DOI: 10.1021/acs.jpcb.7b04264] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Shijie Sheng
- Department of Chemical and
Environmental Engineering, University of California, Riverside, California 92521, United States
| | - Michael Miller
- Department of Chemical and
Environmental Engineering, University of California, Riverside, California 92521, United States
| | - Jianzhong Wu
- Department of Chemical and
Environmental Engineering, University of California, Riverside, California 92521, United States
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8
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9
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Li J, Fu J, Huang X, Lu D, Wu J. Predicting hydration free energies of amphetamine-type stimulants with a customized molecular model. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2016; 28:344001. [PMID: 27367616 DOI: 10.1088/0953-8984/28/34/344001] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Amphetamine-type stimulants (ATS) are a group of incitation and psychedelic drugs affecting the central nervous system. Physicochemical data for these compounds are essential for understanding the stimulating mechanism, for assessing their environmental impacts, and for developing new drug detection methods. However, experimental data are scarce due to tight regulation of such illicit drugs, yet conventional methods to estimate their properties are often unreliable. Here we introduce a tailor-made multiscale procedure for predicting the hydration free energies and the solvation structures of ATS molecules by a combination of first principles calculations and the classical density functional theory. We demonstrate that the multiscale procedure performs well for a training set with similar molecular characteristics and yields good agreement with a testing set not used in the training. The theoretical predictions serve as a benchmark for the missing experimental data and, importantly, provide microscopic insights into manipulating the hydrophobicity of ATS compounds by chemical modifications.
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Affiliation(s)
- Jipeng Li
- Department of Chemical Engineering, Tsinghua University, Beijing 100084, People's Republic of China. Department of Chemical and Environmental Engineering and Department of Mathematics, University of California, Riverside, CA 92521, USA
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10
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Affiliation(s)
- Shijie Sheng
- Department of Chemical and Environmental Engineering, University of California, Riverside, CA, USA
| | - Jianzhong Wu
- Department of Chemical and Environmental Engineering, University of California, Riverside, CA, USA
- Department of Mathematics, University of California, Riverside, CA, USA
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11
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Ghobadi AF, Letteri R, Parelkar SS, Zhao Y, Chan-Seng D, Emrick T, Jayaraman A. Dispersing Zwitterions into Comb Polymers for Nonviral Transfection: Experiments and Molecular Simulation. Biomacromolecules 2016; 17:546-57. [DOI: 10.1021/acs.biomac.5b01462] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
- Ahmadreza F. Ghobadi
- Department
of Chemical and Biomolecular Engineering, University of Delaware, 150 Academy Street, Newark, Delaware 19716 United States
| | - Rachel Letteri
- Department
of Polymer Science and Engineering, University of Massachusetts, 120
Governors Drive, Amherst, Massachusetts 01003, United States
| | - Sangram S. Parelkar
- Department
of Polymer Science and Engineering, University of Massachusetts, 120
Governors Drive, Amherst, Massachusetts 01003, United States
| | - Yue Zhao
- Quantum
Beam Science Center, Japan Atomic Energy Agency, Tokai, Ibaraki 319-1195, Japan
| | - Delphine Chan-Seng
- Institut Charles
Sadron UPR22-CNRS, 23 rue du Loess, 67034 Strasbourg, France
| | - Todd Emrick
- Department
of Polymer Science and Engineering, University of Massachusetts, 120
Governors Drive, Amherst, Massachusetts 01003, United States
| | - Arthi Jayaraman
- Department
of Chemical and Biomolecular Engineering, University of Delaware, 150 Academy Street, Newark, Delaware 19716 United States
- Department
of Materials Science and Engineering, University of Delaware, 201 DuPont
Hall, Newark, Delaware 19716 United States
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12
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Fu J, Tian Y, Wu J. Classical density functional theory for methane adsorption in metal-organic framework materials. AIChE J 2015. [DOI: 10.1002/aic.14877] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Affiliation(s)
- Jia Fu
- Dept. of Chemical and Environmental Engineering; University of California; Riverside CA 92521
| | - Yun Tian
- Dept. of Chemical and Environmental Engineering; University of California; Riverside CA 92521
| | - Jianzhong Wu
- Dept. of Chemical and Environmental Engineering; University of California; Riverside CA 92521
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13
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Ratkova EL, Palmer DS, Fedorov MV. Solvation thermodynamics of organic molecules by the molecular integral equation theory: approaching chemical accuracy. Chem Rev 2015; 115:6312-56. [PMID: 26073187 DOI: 10.1021/cr5000283] [Citation(s) in RCA: 133] [Impact Index Per Article: 14.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Affiliation(s)
- Ekaterina L Ratkova
- †G. A. Krestov Institute of Solution Chemistry of the Russian Academy of Sciences, Akademicheskaya Street 1, Ivanovo 153045, Russia.,‡The Max Planck Institute for Mathematics in the Sciences, Inselstrasse 22, Leipzig 04103, Germany
| | - David S Palmer
- ‡The Max Planck Institute for Mathematics in the Sciences, Inselstrasse 22, Leipzig 04103, Germany.,§Department of Chemistry, University of Strathclyde, Thomas Graham Building, 295 Cathedral Street, Glasgow, Scotland G1 1XL, United Kingdom
| | - Maxim V Fedorov
- ‡The Max Planck Institute for Mathematics in the Sciences, Inselstrasse 22, Leipzig 04103, Germany.,∥Department of Physics, Scottish Universities Physics Alliance (SUPA), University of Strathclyde, John Anderson Building, 107 Rottenrow East, Glasgow G4 0NG, United Kingdom
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14
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Zhao S, Liu Y, Chen X, Lu Y, Liu H, Hu Y. Unified Framework of Multiscale Density Functional Theories and Its Recent Applications. MESOSCALE MODELING IN CHEMICAL ENGINEERING PART II 2015. [DOI: 10.1016/bs.ache.2015.10.001] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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