An efficient manganese-oxidizing fungus Cladosporium halotolerans strain XM01: Mn(II) oxidization and Cd adsorption behavior

GmAMT2.1/2.2-dependent ammonium nitrogen and metabolites shape rhizosphere microbiome assembly to mitigate cadmium toxicity

Cadmium (Cd), a heavy metal, is negatively associated with plant growth. AMT (ammonium transporter) genes can confer Cd resistance and enhance nitrogen (N) uptake in soybeans. The potential of AMT genes to alleviate Cd toxicity by modulating rhizosphere microbiota remains unkonwn. Here, the rhizosphere microbial taxonomic and metabolic differences in three genotypes, i.e., double knockout and overexpression lines and wild type, were identified. The results showed that GmAMT2.1/2.2 genes could induce soybean to recruit beneficial microorganisms, such as Tumebacillus, Alicyclobacillus, and Penicillium, by altering metabolites. The bacterial, fungal, and cross-kingdom synthetic microbial communities (SynComs) formed by these microorganisms can help soybean resist Cd toxicity. The mechanisms by which SynComs help soybeans resist Cd stress include reducing Cd content, increasing ammonium (NH4+-N) uptake and regulating specific functional genes in soybeans. Overall, this study provides valuable insights for the developing microbial formulations that enhance Cd resistance in sustainable agriculture.

Formation of Biogenic Manganese Oxide Nodules on Hyphae of a New Fungal Isolate of Periconia That Immobilizes Aqueous Copper

Mn(II)-oxidizing microorganisms are considered to play significant roles in the natural geochemical cycles of Mn and other heavy metals because the insoluble biogenic Mn oxides (BMOs) that are produced by these microorganisms adsorb other dissolved heavy metals and immobilize them as precipitates. In the present study, a new Mn(II)-oxidizing fungal strain belonging to the ascomycete genus Periconia, a well-studied plant-associating fungal genus with Mn(II)-oxidizing activity that has not yet been exami-ned in detail, was isolated from natural groundwater outflow sediment. This isolate, named strain TS-2, was confirmed to oxidize dissolved Mn(II) and produce insoluble BMOs that formed characteristic, separately-located nodules on their hyphae while leaving major areas of the hyphae free from encrustation. These BMO nodules also adsorbed and immobilized dissolved Cu(II), a model analyte of heavy metals, as evidenced by elemental mapping ana-lyses of fungal hyphae-BMO assemblages using a scanning electron microscope with energy-dispersive X-ray spectroscopy (SEM-EDX). Analyses of functional genes within the whole genome of strain TS-2 further revealed the presence of multiple genes predicted to encode laccases/multicopper oxidases that were potentially responsible for Mn(II) oxidation by this strain. The formation of BMO nodules may have functioned to prevent the complete encrustation of fungal hyphae, thereby enabling the control of heavy metal concentrations in their local microenvironments while maintaining hyphal functionality. The present results will expand our knowledge of the physiological and morphological traits of Mn(II)-oxidizing Periconia, which may affect the natural cycle of heavy metals through their immobilization.

Biological Oxidation of Manganese Mediated by the Fungus Neoroussoella solani MnF107

Manganese oxides are highly reactive minerals and influence the geochemical cycling of carbon, nutrients, and numerous metals in natural environments. Natural Mn oxides are believed to be dominantly formed by biotic processes. A marine Mn-oxidizing fungus Neoroussoella solani MnF107 was isolated and characterized in this study. SEM observations show that the Mn oxides are formed on the fungal hyphal surfaces and parts of the hypha are enveloped by Mn oxides. TEM observations show that the Mn oxides have a filamentous morphology and are formed in a matrix of EPS enveloping the fungal cell wall. Mineral phase analysis of the fungal Mn oxides by XRD indicates that it is poorly crystalline. Chemical oxidation state analysis of the fungal Mn oxides confirms that it is predominantly composed of Mn(IV), indicating that Mn(II) has been oxidized to Mn (IV) by the fungus.

Antimony(III) removal by biogenic manganese oxides formed by Pseudomonas aeruginosa PA-1: kinetics and mechanisms

In this study, Pseudomonas aeruginosa PA-1, a manganese-oxidizing bacterium screened from the soil at a manganese mining area, was found to be tolerated to Sb(III) stress during the Mn(II) oxidation, and the generated biological manganese oxide (BMO) outperformed the identical type of Abiotic-MnOX in terms of oxidation and adsorption of Sb(III). Adsorption kinetics and isotherm experiments indicated that Sb(III) was primarily adsorbed through chemisorption and multilayer adsorption on BMO; the maximum adsorption capacity of BMO was 143.15 mg·g-1. Removal kinetic studies showed that the Sb(III) removal efficiency by BMO was 72.38-95.71% after 15 min, and it could be up to 96.32-98.31% after 480 min. The removal procedure could be divided into two stages, fast (within 15 min) and slow (15 ~ 480 min), both of which exhibited first-order kinetic behavior. Dynamic fitting in two steps revealed that the removal speed correlated to the level of dissolved Sb(III) with low Sb(III) concentrations, but with the initial concentration being high, the removal speed rate was independent of dissolved Sb(III). During the whole process, the Sb(III) removal speed by BMO was also higher than that by the Abiotic-MnOX. Combining multiple spectroscopic techniques revealed that Sb(V) was generated through the Sb(III) oxidation by BMO and replacing surface metal hydroxyl groups to form the complex internal Mn-O(H)-Sb(V) or generating stable Mn(II)-antimonate precipitates on the surface. In addition, microbial metabolites, including tryptophan and humus, in BMO may be complex with Sb(III) and Sb(V) to achieve the treatment of Sb(III). This research investigates the factors and mechanisms influencing the adsorption and removal of Sb(III) by BMO, which could aid in its future engineering applications for the BMO.

Diversity of Mycogenic Oxide and Chalcogenide Nanoparticles: A Review

Oxide and chalcogenide nanoparticles have great potential for use in biomedicine, engineering, agriculture, environmental protection, and other research fields. The myco-synthesis of nanoparticles with fungal cultures, their metabolites, culture liquids, and mycelial and fruit body extracts is simple, cheap and environmentally friendly. The characteristics of nanoparticles, including their size, shape, homogeneity, stability, physical properties and biological activity, can be tuned by changing the myco-synthesis conditions. This review summarizes the data on the diversity of oxide and chalcogenide nanoparticles produced by various fungal species under different experimental conditions.

Occurrence of polycyclic aromatic compounds and interdomain microbial communities in oilfield soils

Soil polycyclic aromatic compound (PAC) pollution as a result of petroleum exploitation has caused serious environmental problems. The unclear assembly and functional patterns of microorganisms in oilfield soils limits the understanding of microbial mechanisms for PAC elimination and health risk reduction. This study investigated the polycyclic aromatic hydrocarbons (PAHs) and substituted PAHs (SPAHs) occurrence, and their impact on the bacteria-archaea-fungi community diversity, co-occurrence network and functionality in the soil of an abandoned oilfield. The results showed that the PAC content in the oilfield ranged from 3429.03 μg kg^-1 to 6070.89 μg kg^-1, and risk assessment results suggested a potential cancer risk to children and adults. High molecular weight PAHs (98.9%) and SPAHs (1.0%) contributed to 99.9% of the toxic equivalent concentration. For microbial analysis, the abundantly detected degraders and unigenes indicated the microbial potential to mitigate pollutants and reduce health risks. Microbial abundance and diversity were found to be negatively correlated with health risk. The co-occurrence network analysis revealed nonrandom assembly patterns of the interdomain microbial communities, and species in the network exhibited strong positive connections (59%). The network demonstrated strong ecological linkages and was divided into five smaller coherent modules, in which the functional microbes were mainly involved in organic substance and mineral component degradation, biological electron transfer and nutrient cycle processes. The keystone species for maintaining microbial ecological functions included Marinobacter of bacteria and Neocosmospora of fungi. Additionally, benzo [g,h,i]pyrene, dibenz [a,h]anthracene, indeno [1,2,3-cd]perylene and total phosphorus were the key environmental factors driving the assembly and functional patterns of microbial communities under pollution stress. This work improves the knowledge of the functional pattern and environmental adaptation mechanisms of interdomain microbes, and provides valuable guidance for the further bioremediation of PAC-contaminated soils in oilfields.

Trace metals, polycyclic aromatic hydrocarbons and polychlorinated biphenyls in the surface sediments from Sanya River, China: Distribution, sources and ecological risk

The urban inland river ecosystems are now facing comprehensive pollution and governance pressures. Up to now, few works related to the multiple pollution assessment of trace metals, polycyclic aromatic hydrocarbons (PAHs) and polychlorinated biphenyls (PCBs) for the urban inland river sediments have been reported in China. Our study investigated the spatial distribution, ecological risk and potential sources of trace metals, PAHs and PCBs in surface sediment collected from 20 sampling sites of Sanya River, Hainan Province, China. The pollution status and potential ecological risk of trace metals were evaluated using the contamination indexes including geoaccumulation index (I_geo), individual potential ecological risk (E_rⁱ), potential ecological risk index (RI) and pollution load index (PLI). Considering the carcinogenicity and toxicity of PAHs and PCBs to human health and the ecological environment, we also analyzed the distributions, sources and adverse biological effects of PAHs and PCBs according to the sediment quality guidelines (SQGs), principal component analysis (PCA) and other source analysis. This study revealed that the surface sediments in Sanya River were extremely slight pollution and showed a very low ecological risk according to I_geo, E_rⁱ, PLI and RI results for trace metals. Besides, PAHs and PCBs pollution detected may not pose considerable adverse biological effect to ecological environment in a foreseeable period on the basis of comprehensive research results. The overall surface sediments quality of the Sanya River not seem to pose a serious pollution and ecological risk based on the evaluation results of multiple pollution factors. The study provided detailed information on the multiple pollution status and location of surface sediments, one of the key environmental indicators of international tourism cities, in the Sanya River, which would be useful for the water quality improvement of Sanya River and the environmental remediation of the other coastal ecosystems from different regions.