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De Souza LA, Da Silva Ferreira L, Gomes EM, P. O. Silva J, Belchior JC, Marques LF. Structure and stability of Eu3+ complexes derivatives from non-steroidal anti-inflammatory drug ibuprofen through a DFT study. COMPUT THEOR CHEM 2022. [DOI: 10.1016/j.comptc.2022.113602] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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2
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De Freitas LV, Dos Santos ALDS, Da Costa FC, Calixto JB, Miranda PVP, Silva TJ, Pereira ES, Rocha WR, De Almeida WB, De Souza LA, Freitas MC. Synthesis and structural characterization of a 8-hydroxyquinoline derivative coordinated to Zn(II). J Mol Struct 2018. [DOI: 10.1016/j.molstruc.2018.05.050] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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3
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Time-resolved photoacoustic calorimetry of organometallic ligand substitution in alkane solvents: Molybdenum-alkane σ bond controls fast ligand addition to molybdenum pentacarbonyl. Chem Phys 2018. [DOI: 10.1016/j.chemphys.2018.01.018] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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4
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Pereira ES, Da Silva JCS, Brandão TAS, Rocha WR. Phosphorane lifetime and stereo-electronic effects along the alkaline hydrolysis of phosphate esters. Phys Chem Chem Phys 2016; 18:18255-67. [DOI: 10.1039/c6cp01536k] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Ab initio molecular dynamics simulations revealed that phosphorane, an important intermediate in the hydrolysis of phosphate diesters, has a lifetime of ∼1 ps in aqueous solution. QTAIM and EDA analyses along the reaction coordinate show that the hydrolysis reaction of phosphate esters is driven mainly by electrostatic interactions.
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Affiliation(s)
- Eufrásia S. Pereira
- Laboratório de Química Computacional e Modelagem Molecular
- Departamento de Química
- ICEX
- Universidade Federal de Minas Gerais
- Campus Universitário Pampulha
| | - Júlio C. S. Da Silva
- Biomaterial Modeling Group
- Departamento de Química Fundamental
- CCEN
- Universidade Federal de Pernambuco
- Cidade Universitária
| | - Tiago A. S. Brandão
- Laboratório de Catálise e Mecanismos de Reações
- Departamento de Química
- ICEX
- Universidade Federal de Minas Gerais
- Campus Universitário Pampulha
| | - Willian R. Rocha
- Laboratório de Química Computacional e Modelagem Molecular
- Departamento de Química
- ICEX
- Universidade Federal de Minas Gerais
- Campus Universitário Pampulha
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5
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Da Silva JC, Rocha WR. Insights into the coordination chemistry of alkanes to metal carbonyls from quantum chemical calculations. J Organomet Chem 2015. [DOI: 10.1016/j.jorganchem.2015.03.017] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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6
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Zins EL, Silvi B, Alikhani ME. Activation of C–H and B–H bonds through agostic bonding: an ELF/QTAIM insight. Phys Chem Chem Phys 2015; 17:9258-81. [DOI: 10.1039/c4cp05728g] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
X–H agostic bonding: a topological insight.
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Affiliation(s)
- Emilie-Laure Zins
- Sorbonne Universités
- UPMC Univ. Paris 06
- MONARIS
- UMR 8233
- Université Pierre et Marie Curie
| | - Bernard Silvi
- Sorbonne Universités
- UPMC Univ. Paris 06
- Laboratoire de Chimie Théorique (LCT)
- UMR 7616
- Université Pierre et Marie Curie
| | - M. Esmaïl Alikhani
- Sorbonne Universités
- UPMC Univ. Paris 06
- MONARIS
- UMR 8233
- Université Pierre et Marie Curie
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de Almeida KJ, Ramalho TC, Neto JL, Santiago RT, Felicíssimo VC, Duarte HA. Methane Dehydrogenation by Niobium Ions: A First-Principles Study of the Gas-Phase Catalytic Reactions. Organometallics 2013. [DOI: 10.1021/om300856c] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- K. J. de Almeida
- Departamento de
Quı́mica, Universidade Federal de Uberlândia, Av. João Naves de Ávila,
2121, Santa Mônica, Uberlândia, CEP 38400-902, MG, Brazil
| | - T. C. Ramalho
- Departamento de
Quı́mica, Universidade Federal de Lavras, CP 3037, Lavras, MG, Brazil
| | - J. L. Neto
- Departamento de
Quı́mica, Universidade Federal de Lavras, CP 3037, Lavras, MG, Brazil
| | - R. T. Santiago
- Departamento de
Quı́mica, Universidade Federal de Lavras, CP 3037, Lavras, MG, Brazil
| | - V. C. Felicíssimo
- Departamento de
Quı́mica, Universidade Federal de Sergipe, Av. Marechal Rondon, s/n, Jardim Rosa Elze,
CEP-49100-000, São Cristóvão, SE, Brazil
| | - H. A. Duarte
- Departamento de
Quı́mica, Universidade Federal de Minas Gerais, Avenida Antonio Carlos, 6627, CEP-31270-901,
Belo Horizonte, Minas Gerais, Brazil
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8
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da Costa LM, Amorim RM, de Macedo Cruz MT, de M. Carneiro JW. Density Functional Theory studies on interactions of phosphoryl ligands with a pentaaqua Ca2+ complex: Bond interaction analysis. COMPUT THEOR CHEM 2012. [DOI: 10.1016/j.comptc.2012.08.003] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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9
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LOPES JULIANAFEDOCE, DA SILVA JÚLIOCS, ROCHA WILLIANR, DE ALMEIDA WAGNERB, DOS SANTOS HÉLIOF. QUANTUM CHEMICAL STUDY OF CISPLATIN-WATER COMPLEXES: AN INVESTIGATION OF ELECTRON CORRELATION EFFECTS. JOURNAL OF THEORETICAL & COMPUTATIONAL CHEMISTRY 2012. [DOI: 10.1142/s0219633611006517] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
The interaction of cisplatin ([ Pt(NH3)2Cl2] ) with water was studied for distinct complexation modes aiming to investigate the level of calculation required to describe transition metal complexes of biological relevance, where large scale ab initio post-Hartree-Fock calculations are usually precluded. Coupled Cluster (CCSD(T)) single point calculations employing MP2 and MP4(SDQ) optimized geometries and good quality basis sets, using effective core potential for platinum atom, are reported as well as Density Functional Theory (DFT) results employing various exchange-correlation functional. The importance of electron correlation effects for the calculation of interaction energies is discussed. The extension of correlation energy recovered by DFT was assessed considering the CCSD(T) results as reference. The recently developed M06-2x functional showed the best overall agreement with CCSD(T) calculations. The relative importance of the electrostatic and dispersion contributions to the interaction energy was estimated with the aid of the atoms in molecules theory and also using an empirical approach based on the multipole expansion method. It was found a strong dependence of the energy contributions on the spatial orientation of water and cisplatin monomers, with the electrostatic contribution dominating the interaction energy for the lowest energy equilibrium structures.
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Affiliation(s)
- JULIANA FEDOCE LOPES
- LQC-MM: Laboratório de Química Computacional e Modelagem Molecular, Departamento de Química, ICEx, Universidade Federal de Minas Gerais (UFMG), Campus Universitário, Pampulha, Belo Horizonte, MG, 31270-901, Brazil
| | - JÚLIO C. S. DA SILVA
- LQC-MM: Laboratório de Química Computacional e Modelagem Molecular, Departamento de Química, ICEx, Universidade Federal de Minas Gerais (UFMG), Campus Universitário, Pampulha, Belo Horizonte, MG, 31270-901, Brazil
| | - WILLIAN R. ROCHA
- LQC-MM: Laboratório de Química Computacional e Modelagem Molecular, Departamento de Química, ICEx, Universidade Federal de Minas Gerais (UFMG), Campus Universitário, Pampulha, Belo Horizonte, MG, 31270-901, Brazil
| | - WAGNER B. DE ALMEIDA
- LQC-MM: Laboratório de Química Computacional e Modelagem Molecular, Departamento de Química, ICEx, Universidade Federal de Minas Gerais (UFMG), Campus Universitário, Pampulha, Belo Horizonte, MG, 31270-901, Brazil
| | - HÉLIO F. DOS SANTOS
- NEQC: Núcleo de Estudos em Química Computacional, Departamento de Química, ICE, Universidade Federal de Juiz de Fora (UFJF), Campus Universitário, Martelos, Juiz de Fora, MG, 36036-330, Brazil
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Gittermann SM, Letterman RG, Jiao T, Leu GL, DeYonker NJ, Webster CE, Burkey TJ. Bond Energies, Reaction Volumes, and Kinetics for σ- and π-Complexes of Mo(CO)5L. J Phys Chem A 2011; 115:9004-13. [DOI: 10.1021/jp203915q] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Shannon M. Gittermann
- Department of Chemistry, The University of Memphis, Memphis, Tennessee 38152-3550, United States
| | - Roger G. Letterman
- Department of Chemistry, The University of Memphis, Memphis, Tennessee 38152-3550, United States
| | - Tianjie Jiao
- Department of Chemistry, The University of Memphis, Memphis, Tennessee 38152-3550, United States
| | - Ging-Long Leu
- Department of Chemistry, The University of Memphis, Memphis, Tennessee 38152-3550, United States
| | - Nathan J. DeYonker
- Department of Chemistry, The University of Memphis, Memphis, Tennessee 38152-3550, United States
| | - Charles Edwin Webster
- Department of Chemistry, The University of Memphis, Memphis, Tennessee 38152-3550, United States
| | - Theodore J. Burkey
- Department of Chemistry, The University of Memphis, Memphis, Tennessee 38152-3550, United States
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11
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Calladine JA, Duckett SB, George MW, Matthews SL, Perutz RN, Torres O, Vuong KQ. Manganese Alkane Complexes: An IR and NMR Spectroscopic Investigation. J Am Chem Soc 2011; 133:2303-10. [DOI: 10.1021/ja110451k] [Citation(s) in RCA: 76] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- James A. Calladine
- School of Chemistry, University of Nottingham, University Park, Nottingham NG7 2RD, United Kingdom
| | - Simon B. Duckett
- Department of Chemistry, University of York, Heslington, York YO10 5DD, United Kingdom
| | - Michael W. George
- School of Chemistry, University of Nottingham, University Park, Nottingham NG7 2RD, United Kingdom
| | - Steven L. Matthews
- Department of Chemistry, University of York, Heslington, York YO10 5DD, United Kingdom
| | - Robin N. Perutz
- Department of Chemistry, University of York, Heslington, York YO10 5DD, United Kingdom
| | - Olga Torres
- Department of Chemistry, University of York, Heslington, York YO10 5DD, United Kingdom
| | - Khuong Q. Vuong
- School of Chemistry, University of Nottingham, University Park, Nottingham NG7 2RD, United Kingdom
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