Photoluminescence intensity enhancement in SWNT aqueous suspensions due to reducing agent doping: Influence of adsorbed biopolymer

Hybridization of papain molecules and DNA-wrapped single-walled carbon nanotubes evaluated by atomic force microscopy in fluids

Although various conjugates of single-walled carbon nanotubes (SWNTs) and biomolecules, such as nanobiosensors and nanobiodevices, have been reported, the conjugation of papain and SWNTs have not been reported because of the formation of unexpected aggregates. In this study, atomic force microscopy (AFM) in liquid was used to investigate the interactions between papain and DNA-wrapped SWNTs (DNA-SWNTs) at two different pH values (pH 3.0 and 10.5). The direct AFM observation of the mixture of papain and DNA-SWNTs confirmed the aggregation of papain molecules with DNA-SWNTs in the buffer solutions. The numerous and non-uniform adsorption of papain molecules onto DNA-SWNTs was more pronounced at pH 3.0 than that at pH 10.5. Furthermore, thick conjugates appeared when papain and DNA-SWNTs were simultaneously mixed. The near-infrared photoluminescence spectra of the SWNTs drastically changed when the papain molecules were injected into the DNA-SWNT suspension at pH 3.0. Thus, the regulation of electrostatic interactions is a key aspect in preparing optimal conjugates of papain and DNA-SWNTs. Furthermore, although previous papers reported AFM images of dried samples, this study demonstrates the potential of AFM in liquid in evaluating individual bioconjugates of SWNTs.

Ionic Strength-Mediated Phase Transitions of Surface-Adsorbed DNA on Single-Walled Carbon Nanotubes

Single-stranded DNA oligonucleotides have unique, and in some cases sequence-specific molecular interactions with the surface of carbon nanotubes that remain the subject of fundamental study. In this work, we observe and analyze a generic, ionic strength-mediated phase transition exhibited by over 25 distinct oligonucleotides adsorbed to single-walled carbon nanotubes (SWCNTs) in colloidal suspension. The phase transition occurs as monovalent salts are used to modify the ionic strength from 500 mM to 1 mM, causing a reversible reduction in the fluorescence quantum yield by as much as 90%. The phase transition is only observable by fluorescence quenching within a window of pH and in the presence of dissolved O₂, but occurs independently of this optical quenching. The negatively charged phosphate backbone increases (decreases) the DNA surface coverage on an areal basis at high (low) ionic strength, and is well described by a two-state equilibrium model. The resulting quantitative model is able to describe and link, for the first time, the observed changes in optical properties of DNA-wrapped SWCNTs with ionic strength, pH, adsorbed O₂, and ascorbic acid. Cytosine nucleobases are shown to alter the adhesion of the DNA to SWCNTs through direct protonation from solution, decreasing the driving force for this phase transition. We show that the phase transition also changes the observed SWCNT corona phase, modulating the recognition of riboflavin. These results provide insight into the unique molecular interactions between DNA and the SWCNT surface, and have implications for molecular sensing, assembly, and nanoparticle separations.

Monitoring the antioxidant effects of catechin using single-walled carbon nanotubes: Comparative analysis by near-infrared absorption and near-infrared photoluminescence

We measured the optical responses of single-walled carbon nanotubes (SWNTs) after adding Japanese green tea or catechin. SWNTs were covered with DNA in aqueous solution, and tea or catechin solution was added to the DNA-SWNT suspension. The antioxidant effects of tea and catechin were detected as changes in the near-infrared (NIR) absorption (ABS) and NIR-photoluminescence (PL) spectra of the SWNTs. Commercial Japanese tea, diluted 100 times and containing 15μg/mL catechin, was sufficient for recovering NIR-ABS and NIR-PL spectra when the DNA-SWNT suspension was pre-treated with 0.03% hydrogen peroxide(H₂O₂). Similar results were obtained with 15μg/mL of pure catechin solution. SWNTs with specific chirality were sensitive to the NIR-ABS and NIR-PL changes. The (10, 5)/(8, 7) and (9, 4) SWNTs showed the highest recovery in NIR-ABS and NIR-PL, respectively. NIR-PL recovery was higher than that of NIR-ABS for (10, 5)/(8, 7) and (9, 4). Spectral changes could be monitored thoroughly at pH 8.0, contrary to pH 6.0 and 7.3. However, the most dynamic recovery of NIR-ABS and NIR-PL was observed at pH 6.0. Furthermore, time-lapse measurements revealed that recovery was faster with tea or catechin addition than H₂O₂-induced oxidation.

Enhancement of Photoluminescence from Semiconducting Nanotubes in Aqueous Suspensions due to Cysteine and Dithiothreitol Doping: Influence of the Sonication Treatment

The influence of tip sonication duration on the spectral characteristics of carbon single-walled nanotubes (SWNTs) in aqueous suspension with single-stranded DNA (ssDNA) has been studied by NIR luminescence, NIR absorption, and Raman spectroscopy. It was revealed that prolongation of sonication leads to weakening of the SWNT polymer coverage and appearance of additional defects on the nanotube surface. Prolongation of the tip sonication treatment of SWNT/ssDNA from 30 to 90 min leads to the increase of the number of individual nanotubes in the aqueous suspension, but it significantly decreases the photoluminescence (PL) from semiconducting SWNTs because more defects are formed on the nanotube surface. At probing the SWNT/ssDNA emission with cysteine or dithiothreitol (DTT) doping the nanotube aqueous suspension showed the different PL intensity enhancement depending on the duration of the sonication treatment and on the ability of these reducing agents to passivate emission-quenching defects on the carbon nanotube sidewall. The magnitude of the PL enhancement rises with sonication prolongation and depends on the nanotube chirality. Tight and ordered polymer coverage of (6,4) nanotubes hampers the access of the reducing agent to emission-quenching defects on the nanotube surface and provides the weaker PL intensity increasing while (7,5) nanotubes show the strongest reaction to the doping effect. The comparison of cysteine and DTT ability to passivate the emission-quenching defects showed the higher efficiency of DTT doping. This prevailing is explained by the stronger reducing activity of DTT which is determined by a lower redox potential of this molecule.