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Lian DS, Chen XY, Zeng HS, Wang YY. Capillary electrophoresis based on nucleic acid analysis for diagnosing inherited diseases. Clin Chem Lab Med 2020; 59:249-266. [PMID: 32374277 DOI: 10.1515/cclm-2020-0186] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2020] [Accepted: 04/04/2020] [Indexed: 11/15/2022]
Abstract
Most hereditary diseases are incurable, but their deterioration could be delayed or stopped if diagnosed timely. It is thus imperative to explore the state-of-the-art and high-efficient diagnostic techniques for precise analysis of the symptoms or early diagnosis of pre-symptoms. Diagnostics based on clinical presentations, hard to distinguish different phenotypes of the same genotype, or different genotypes displaying similar phenotypes, are incapable of pre-warning the disease status. Molecular diagnosis is ahead of harmful phenotype exhibition. However, conventional gold-standard molecular classifications, such as karyotype analysis, Southern blotting (SB) and sequencing, suffer drawbacks like low automation, low throughput, prolonged duration, being labor intensive and high cost. Also, deficiency in flexibility and diversity is observed to accommodate the development of precise and individualized diagnostics. The aforementioned pitfalls make them unadaptable to the increasing clinical demand for detecting and interpreting numerous samples in a rapid, accurate, high-throughput and cost-effective manner. Nevertheless, capillary electrophoresis based on genetic information analysis, with advantages of automation, high speed, high throughput, high efficiency, high resolution, digitization, versatility, miniature and cost-efficiency, coupled with flexible-designed PCR strategies in sample preparation (PCR-CE), exhibit an excellent power in deciphering cryptic molecular information of superficial symptoms of genetic diseases, and can analyze in parallel a large number of samples in a single PCR-CE, thereby providing an alternative, accurate, customized and timely diagnostic tool for routine screening of clinical samples on a large scale. Thus, the present study focuses on CE-based nucleic acid analysis used for inherited disease diagnosis. Also, the limitations and challenges of this PCR-CE for diagnosing hereditary diseases are discussed.
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Affiliation(s)
- Dong-Sheng Lian
- Guangzhou Women and Children's Medical Center of Guangzhou Medical University, NO. 9 at Jinsui Rd., Tianhe District, Guangzhou, Guangdong, P.R. China.,Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan, P.R. China
| | - Xiang-Yuan Chen
- Guangzhou Women and Children's Medical Center of Guangzhou Medical University, NO. 9 at Jinsui Rd., Tianhe District, Guangzhou, Guangdong, P.R. China
| | - Hua-Song Zeng
- Guangzhou Women and Children's Medical Center of Guangzhou Medical University, NO. 9 at Jinsui Rd., Tianhe District, Guangzhou, Guangdong, P.R. China
| | - Yan-Yi Wang
- Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan, P.R. China
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2
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Chu C, Lian L, Liu C, Li J, Mao H, Jiang L, Yan J. Online preconcentration by electrokinetic supercharging for sensitive determination of berberine and jatrorrhizine in biological samples. Biomed Chromatogr 2020; 34:e4824. [DOI: 10.1002/bmc.4824] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2019] [Revised: 02/24/2020] [Accepted: 03/04/2020] [Indexed: 01/06/2023]
Affiliation(s)
- Chu Chu
- College of Pharmaceutical ScienceZhejiang University of Technology Hangzhou P.R. China
| | - Linmin Lian
- College of Pharmaceutical ScienceZhejiang University of Technology Hangzhou P.R. China
| | - Caijing Liu
- College of Pharmaceutical ScienceZhejiang University of Technology Hangzhou P.R. China
| | - Jing Li
- College of Pharmaceutical ScienceZhejiang University of Technology Hangzhou P.R. China
| | - Hui Mao
- College of Pharmaceutical ScienceZhejiang University of Technology Hangzhou P.R. China
| | - Luyi Jiang
- College of Pharmaceutical ScienceZhejiang University of Technology Hangzhou P.R. China
| | - Jizhong Yan
- College of Pharmaceutical ScienceZhejiang University of Technology Hangzhou P.R. China
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3
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Preparative concentration of nucleic acids fragments by capillary isotachophoretic analyzer. J Chromatogr A 2018; 1548:100-103. [DOI: 10.1016/j.chroma.2018.03.021] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2017] [Revised: 03/05/2018] [Accepted: 03/13/2018] [Indexed: 01/07/2023]
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4
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Datinská V, Voráčová I, Schlecht U, Berka J, Foret F. Recent progress in nucleic acids isotachophoresis. J Sep Sci 2017; 41:236-247. [DOI: 10.1002/jssc.201700878] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2017] [Revised: 09/15/2017] [Accepted: 09/15/2017] [Indexed: 01/30/2023]
Affiliation(s)
- Vladimíra Datinská
- Czech Academy of Sciences; Institute of Analytical Chemistry; Brno Czech Republic
- Masaryk University; Faculty of Science; Brno Czech Republic
| | - Ivona Voráčová
- Czech Academy of Sciences; Institute of Analytical Chemistry; Brno Czech Republic
| | | | - Jan Berka
- Roche Sequencing Solutions, Inc; Pleasanton CA USA
| | - František Foret
- Czech Academy of Sciences; Institute of Analytical Chemistry; Brno Czech Republic
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5
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Lian DS, Zeng HS. Capillary Electrophoresis Based on Nucleic Acid Detection as Used in Food Analysis. Compr Rev Food Sci Food Saf 2017; 16:1281-1295. [DOI: 10.1111/1541-4337.12297] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2017] [Revised: 07/14/2017] [Accepted: 07/19/2017] [Indexed: 12/21/2022]
Affiliation(s)
- Dong-Sheng Lian
- Guangzhou Women and Children's Medical Center of Guangzhou Medical University; NO. 9 at Jinsui Rd., Tianhe District Guangzhou Guangdong China
| | - Hua-Song Zeng
- Guangzhou Women and Children's Medical Center of Guangzhou Medical University; NO. 9 at Jinsui Rd., Tianhe District Guangzhou Guangdong China
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6
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Lian DS, Zhao SJ. Capillary electrophoresis based on nucleic acid detection for diagnosing human infectious disease. Clin Chem Lab Med 2017; 54:707-38. [PMID: 26352354 DOI: 10.1515/cclm-2015-0096] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2015] [Accepted: 06/17/2015] [Indexed: 01/22/2023]
Abstract
Rapid transmission, high morbidity, and mortality are the features of human infectious diseases caused by microorganisms, such as bacteria, fungi, and viruses. These diseases may lead within a short period of time to great personal and property losses, especially in regions where sanitation is poor. Thus, rapid diagnoses are vital for the prevention and therapeutic intervention of human infectious diseases. Several conventional methods are often used to diagnose infectious diseases, e.g. methods based on cultures or morphology, or biochemical tests based on metabonomics. Although traditional methods are considered gold standards and are used most frequently, they are laborious, time consuming, and tedious and cannot meet the demand for rapid diagnoses. Disease diagnosis using capillary electrophoresis methods has the advantages of high efficiency, high throughput, and high speed, and coupled with the different nucleic acid detection strategies overcomes the drawbacks of traditional identification methods, precluding many types of false positive and negative results. Therefore, this review focuses on the application of capillary electrophoresis based on nucleic detection to the diagnosis of human infectious diseases, and offers an introduction to the limitations, advantages, and future developments of this approach.
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Wang WF, Ju FR, Ran YL, Zhang HG, Chen XG. Detection of biogenic amines in C57BL/6 mice brain by capillary electrophoresis electrokinetic supercharging. Analyst 2016; 141:956-62. [DOI: 10.1039/c5an01642h] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A facile, sensitive EKS/MEKD-PDAD method was developed for the detection of neurotransmitters in C57BL/6 mice brain.
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Affiliation(s)
- Wei-feng Wang
- State Key Laboratory of Applied Organic Chemistry
- Lanzhou University
- Lanzhou 730000
- China
- Department of Chemistry
| | - Fu-rong Ju
- School of Life Science
- Lanzhou University
- Lanzhou 730000
- China
| | - Yan-li Ran
- School of Life Science
- Lanzhou University
- Lanzhou 730000
- China
| | - Hui-ge Zhang
- State Key Laboratory of Applied Organic Chemistry
- Lanzhou University
- Lanzhou 730000
- China
- Department of Chemistry
| | - Xing-guo Chen
- State Key Laboratory of Applied Organic Chemistry
- Lanzhou University
- Lanzhou 730000
- China
- Department of Chemistry
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Breadmore MC, Tubaon RM, Shallan AI, Phung SC, Abdul Keyon AS, Gstoettenmayr D, Prapatpong P, Alhusban AA, Ranjbar L, See HH, Dawod M, Quirino JP. Recent advances in enhancing the sensitivity of electrophoresis and electrochromatography in capillaries and microchips (2012-2014). Electrophoresis 2015; 36:36-61. [DOI: 10.1002/elps.201400420] [Citation(s) in RCA: 132] [Impact Index Per Article: 14.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2014] [Revised: 09/25/2014] [Accepted: 09/25/2014] [Indexed: 12/15/2022]
Affiliation(s)
- Michael C. Breadmore
- School of Physical Science; Australian Centre of Research on Separation Science, University of Tasmania; Hobart Tasmania Australia
| | - Ria Marni Tubaon
- School of Physical Science; Australian Centre of Research on Separation Science, University of Tasmania; Hobart Tasmania Australia
| | - Aliaa I. Shallan
- School of Physical Science; Australian Centre of Research on Separation Science, University of Tasmania; Hobart Tasmania Australia
| | - Sui Ching Phung
- School of Physical Science; Australian Centre of Research on Separation Science, University of Tasmania; Hobart Tasmania Australia
| | - Aemi S. Abdul Keyon
- School of Physical Science; Australian Centre of Research on Separation Science, University of Tasmania; Hobart Tasmania Australia
- Faculty of Science; Department of Chemistry, Universiti Teknologi Malaysia; Johor Malaysia
| | - Daniel Gstoettenmayr
- School of Physical Science; Australian Centre of Research on Separation Science, University of Tasmania; Hobart Tasmania Australia
| | - Pornpan Prapatpong
- Faculty of Pharmacy; Department of Pharmaceutical Chemistry, Mahidol University; Rajathevee Bangkok Thailand
| | - Ala A. Alhusban
- Faculty of Health Sciences, School of Pharmacy; Australian Centre of Research on Separation Science, University of Tasmania; Hobart Tasmania Australia
| | - Leila Ranjbar
- School of Physical Science; Australian Centre of Research on Separation Science, University of Tasmania; Hobart Tasmania Australia
| | - Hong Heng See
- School of Physical Science; Australian Centre of Research on Separation Science, University of Tasmania; Hobart Tasmania Australia
- Ibnu Sina Institute for Fundamental Science Studies; Universiti Teknologi Malaysia; Johor Malaysia
| | - Mohamed Dawod
- Department of Chemistry; University of Michigan; Ann Arbor MI USA
- Faculty of Pharmacy; Department of Analytical Chemistry, Al-Azhar University; Cairo Egypt
| | - Joselito P. Quirino
- School of Physical Science; Australian Centre of Research on Separation Science, University of Tasmania; Hobart Tasmania Australia
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9
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Lian DS, Zhao SJ. Highly sensitive analysis of nucleic acids using capillary gel electrophoresis with ultraviolet detection based on the combination of matrix field-amplified and head-column field-amplified stacking injection. J Chromatogr B Analyt Technol Biomed Life Sci 2015; 978-979:29-42. [DOI: 10.1016/j.jchromb.2014.11.019] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2014] [Revised: 11/16/2014] [Accepted: 11/20/2014] [Indexed: 12/17/2022]
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10
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Malá Z, Šlampová A, Křivánková L, Gebauer P, Boček P. Contemporary sample stacking in analytical electrophoresis. Electrophoresis 2014; 36:15-35. [DOI: 10.1002/elps.201400313] [Citation(s) in RCA: 46] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2014] [Revised: 08/05/2014] [Accepted: 08/05/2014] [Indexed: 12/14/2022]
Affiliation(s)
- Zdena Malá
- Institute of Analytical Chemistry; Academy of Sciences of the Czech Republic; Brno Czech Republic
| | - Andrea Šlampová
- Institute of Analytical Chemistry; Academy of Sciences of the Czech Republic; Brno Czech Republic
| | - Ludmila Křivánková
- Institute of Analytical Chemistry; Academy of Sciences of the Czech Republic; Brno Czech Republic
| | - Petr Gebauer
- Institute of Analytical Chemistry; Academy of Sciences of the Czech Republic; Brno Czech Republic
| | - Petr Boček
- Institute of Analytical Chemistry; Academy of Sciences of the Czech Republic; Brno Czech Republic
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11
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Progress in stacking techniques based on field amplification of capillary electrophoresis. Anal Bioanal Chem 2014; 406:6129-50. [DOI: 10.1007/s00216-014-8062-7] [Citation(s) in RCA: 48] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2014] [Revised: 07/21/2014] [Accepted: 07/22/2014] [Indexed: 02/07/2023]
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12
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Latep N, Liang X, Qin W. Ionic-liquid-assisted desorption of DNA from polyamidoamine-grafted silica nanoparticles surface by a low-salt solution. J Sep Sci 2014; 37:2069-76. [DOI: 10.1002/jssc.201400203] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2014] [Revised: 04/25/2014] [Accepted: 05/01/2014] [Indexed: 11/08/2022]
Affiliation(s)
- Nurgul Latep
- Key Laboratory of Theoretical and Computational Photochemistry; Ministry of Education, College of Chemistry, Beijing Normal University; Beijing China
| | - Xiao Liang
- Key Laboratory of Theoretical and Computational Photochemistry; Ministry of Education, College of Chemistry, Beijing Normal University; Beijing China
| | - Weidong Qin
- Key Laboratory of Theoretical and Computational Photochemistry; Ministry of Education, College of Chemistry, Beijing Normal University; Beijing China
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13
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Kitagawa F, Otsuka K. Recent applications of on-line sample preconcentration techniques in capillary electrophoresis. J Chromatogr A 2014; 1335:43-60. [DOI: 10.1016/j.chroma.2013.10.066] [Citation(s) in RCA: 137] [Impact Index Per Article: 13.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2013] [Revised: 10/18/2013] [Accepted: 10/21/2013] [Indexed: 12/21/2022]
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14
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Ge Y, Guo Y, Qin W. Polyamidoamine dendrimers as sweeping agent and stationary phase for rapid and sensitive open-tubular capillary electrophoretic determination of heavy metal ions. Talanta 2013; 121:50-5. [PMID: 24607109 DOI: 10.1016/j.talanta.2013.12.041] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2013] [Revised: 12/19/2013] [Accepted: 12/20/2013] [Indexed: 11/26/2022]
Abstract
Polyamidoamine (PAMAM) dendrimer generation 2.5 was synthesized and evaluated as sweeping agent for in-column enrichment and as stationary phase for capillary electrochromatographic separation of heavy metal ions, viz., Pb(II), Cu(II), Hg(II), Zn(II) and Co(II), in a running buffer containing 4-(2-pyridylazo)resorcinol (PAR) as a chromogenic reagent. During experiment, a plug of aqueous PAMAM generation 2.5 solution was first introduced to the capillary, followed by electrokinetic injection of the heavy metal ions under a positive voltage. In this step, PAMAM acted as a sweeping agent, stacking the metal ions on the analyte/PAMAM boundary by forming metal ion-PAMAM complexes. The second preconcentration process occurred when PAR, a stronger ligand, moving toward the injection end under the electric field, reached and re-swept the metal ion-PAMAM zone, forming metal ion-PAR complexes. During separation, the neutral PAMAM moved toward the detector with the electroosmotic flow, dynamically coating the capillary wall, forming stationary phases that affected the separation of the metal ions. Due to the function of PAMAM, the detection sensitivity and resolution of the heavy metal ions improved significantly. Under the optimum conditions, the detection limits were 0.299, 0.184, 0.774, 0.182 and 0.047 μg/L for Pb(II), Cu(II), Hg(II), Zn(II) and Co(II), respectively. The method was successfully applied to the determination of heavy metals in snow, tap and rain water samples.
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Affiliation(s)
- Ying Ge
- College of Chemistry, Beijing Normal University, No. 19, Xinjiekou Wai Street, Beijing 100875, PR China
| | - Yujun Guo
- College of Chemistry, Beijing Normal University, No. 19, Xinjiekou Wai Street, Beijing 100875, PR China
| | - Weidong Qin
- College of Chemistry, Beijing Normal University, No. 19, Xinjiekou Wai Street, Beijing 100875, PR China.
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