Application of ultrahigh-performance liquid chromatography–quadrupole time-of-flight mass spectrometry for the characterization of organic aerosol: Searching for naphthenic acids

Insights into ultrasound-promoted degradation of naphthenic acid compounds in oil sands process affected water. Part I: Accelerated H-abstraction and decarboxylation of aromatic and alicyclic compounds

Propelled by enormous increase in demand for fuel sources, Canadian oil sands are becoming increasingly important as a fuel source due to their abundance and upgrading capability. However, extraction of bitumen, a high acid crude (HAC) oil, requires 2-3 units of water per unit of oil resulting in naphthenic acid (NA)-rich oil sands process affected water (OSPW) collected in effluent ponds. This study illustrates the role of sonochemistry in the accelerated degradation through H-abstraction and subsequent decarboxylation of aromatic and alicyclic naphthenic acid model compounds. Benzoic acid and 3-methylcyclohexane carboxylic acid were selected as model NA compounds to investigate the mechanism of hydroxyl radical (OH^•) initiated carboxylic acid degradation in 378 KHz sonochemical reactor. Established FTIR methods with low resolution LCMS spectroscopy confirmation were applied to determine the extent of carboxylic acid degradation and identify the formation of products. FTIR monitoring showed a non-linear degradation of carboxylic acids with formation of many intermediates highlighting the shift from cyclic carboxylic acids to cyclic alcohols during BA degradation. Subsequent decrease in carboxylic acid groups signifies scission of cyclic structures before complete mineralization. This is confirmed with the LCMS identification of products such as: 3-hydroxybenzoic acid and phenol. This study postulated new breakdown pathways for degradation of benzoic acid with complete mineralization at a sonochemical reaction time (SRT) of 4 h. A radical quenching process was also inferred through the formation of conglomerates during sonochemical degradation of BA. Extension of the study to 3-methylcyclohexane carboxylic acid (3mCHA) shows similar non-linearity with an increase in carboxylic acid groups indicating H-abstraction followed by ring-opened compounds. However, due to the complex nature of 3mCHA's ring-opened compounds, complete mineralization is not achieved. The putative role of sonochemistry is a promising and sustainable degradation method for mitigating NAs in OSPW, but sonication periods need to be considered carefully to ensure adequate mineralization of their constituents and combinatorial methods with other advanced oxidation methods may be needed to enhance industrial application. In Part II, an in silico screening approach using first principles is reported to identify the breakdown of the organic compounds and determine molecular rates of reaction to confirm the mechanistic origins of the compounds formed.

Introduction to the virtual special issue monitoring ecological responses to air quality and atmospheric deposition in the Athabasca Oil Sands region the wood Buffalo environmental Association's Forest health monitoring program

The expansion of oil sands resource development in the Athabasca Oil Sands Region in the early 1990's led to concerns regarding the potential ecological and health effects of increased emissions and deposition of acidic substances. Conditions attached to a 1994 approval for an oil sands facility expansion led to the creation of the Wood Buffalo Environmental Association, and its Terrestrial Environmental Effects Monitoring committee. This multi-stakeholder body was tasked with development and operation of an environmental (forest health) monitoring program for the detection of ecological responses to atmospheric emissions and deposition. Initially focused on acid deposition monitoring, jack pine forest, growing on sandy soils with limited acid buffering capacity, was selected as the receptor system. An initial set of 10 monitoring locations was established using the Canadian Acid Rain Network Early Warning System methodology (since increased to 27, with three lost to development). Ecological monitoring is on a 6-year cycle, with concurrent measures of soil, needle and lichen chemistry, and tree and understory condition, together with ongoing measurements of air quality and atmospheric deposition. Because jack pine forest edges facing the emissions sources were expected to be more exposed to acidic emissions, evaluation of stand edge monitoring locations began in 2008. Monitoring of a targeted suite of indicators began in 2012 at 25 jack pine stand edge monitoring sites. This special issue presents the results derived from biophysical sampling campaigns (1998 to 2013), coupled with ongoing ambient atmospheric, deposition and epiphytic lichen monitoring (data through 2017) and source apportionment studies, as well as papers contributed by others engaged in regional research and monitoring programs. The Forest Health Monitoring Program provides data supportive of regulatory and stakeholder evaluations of environmental quality, and is adaptive to new needs, extreme environmental events and technological development while providing continuity of monitoring.

Current knowledge of seepage from oil sands tailings ponds and its environmental influence in northeastern Alberta

Seepage of oil sand process-affected waters (OSPW) from tailings ponds into surface waters is a common concern in the minable oil sands region of northeast Alberta. Research on seepage has been extensive, but few comprehensive treatments evaluating all aspects relevant to the phenomenon are available. In this work, the current information relevant for understanding the state of seepage from tailings ponds was reviewed. The information suggests the infiltration of OSPW into groundwater occurs near some ponds. OSPW may also be present in sediments beneath the Athabasca River adjacent to one pond, but there are no clear observations of OSPW in the river water. Similarly, most water samples from tributaries also show no evidence of OSPW, but these observations are limited by the lack of systematic, systemic, and repeated surveys, missing baseline data, standard analytical approaches, and reference materials. Waters naturally influenced by bitumen, discharge of saline groundwaters, and dilution also potentially affect the consolidation of information and certainty of any conclusions. Despite these challenges, some data suggest OSPW may be present in two tributaries of the Athabasca River adjacent to tailings ponds: McLean Creek and Lower Beaver River. Irrespective of the possible source(s), constituents of OSPW often affect organisms exposed in laboratories, but research in all but one study suggests the concentrations of organics in the surface water bodies assessed are below the standard toxicological effect thresholds for these compounds. In contrast, many samples of groundwater, irrespective of source, likely affect biota. Biomonitoring of surface waters suggests generic responses to stressors, but the influence of natural phenomena and occasionally nutrient enrichment are often suggested by data. In summary, valuable research has been done on seepage. The data suggest infiltration into groundwater is common, seepage into surface waters is not, and anthropogenic biological impacts are not likely.

Clinical Mass Spectrometry in the Bioinformatics Era: A Hitchhiker's Guide

Mass spectrometry (MS) is a sensitive, specific and versatile analytical technique in the clinical laboratory that has recently undergone rapid development. From initial use in metabolic profiling, it has matured into applications including clinical toxicology assays, target hormone and metabolite quantitation, and more recently, rapid microbial identification and antimicrobial resistance detection by matrix assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS). In this mini-review, we first succinctly outline the basics of clinical mass spectrometry. Examples of hard ionization (electron ionization) and soft ionization (electrospray ionization, MALDI) are presented to demonstrate their clinical applications. Next, a conceptual discourse on mass selection and determination is presented: quadrupole mass filter, time-of-flight mass spectrometer and the Orbitrap; and MS/MS (tandem-in-space, tandem-in-time and data acquisition), illustrated with clinical examples. Current applications in (1) bacterial and fungal identification, antimicrobial susceptibility testing and phylogenetic classification, (2) general unknown urine toxicology screening and expanded new-born metabolic screening and (3) clinical metabolic profiling by gas chromatography are outlined. Finally, major limitations of MS-based techniques, including the technical challenges of matrix effect and isobaric interference; and novel challenges in the post-genomic era, such as protein molecular variants, are critically discussed from the perspective of service laboratories. Computer technology and structural biology have played important roles in the maturation of this field. MS-based techniques have the potential to replace current analytical techniques, and existing expertise and instrument will undergo rapid evolution. Significant automation and adaptation to regulatory requirements are underway. Mass spectrometry is unleashing its potentials in clinical laboratories.