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Swinnen S, de Azambuja F, Parac-Vogt TN. From Nanozymes to Multi-Purpose Nanomaterials: The Potential of Metal-Organic Frameworks for Proteomics Applications. Adv Healthc Mater 2024:e2401547. [PMID: 39246191 DOI: 10.1002/adhm.202401547] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2024] [Revised: 08/14/2024] [Indexed: 09/10/2024]
Abstract
Metal-organic frameworks (MOFs) have the potential to revolutionize the biotechnological and medical landscapes due to their easily tunable crystalline porous structure. Herein, the study presents MOFs' potential impact on proteomics, unveiling the diverse roles MOFs can play to boost it. Although MOFs are excellent catalysts in other scientific disciplines, their role as catalysts in proteomics applications remains largely underexplored, despite protein cleavage being of crucial importance in proteomics protocols. Additionally, the study discusses evolving MOF materials that are tailored for proteomics, showcasing their structural diversity and functional advantages compared to other types of materials used for similar applications. MOFs can be developed to seamlessly integrate into proteomics workflows due to their tunable features, contributing to protein separation, peptide enrichment, and ionization for mass spectrometry. This review is meant as a guide to help bridge the gap between material scientists, engineers, and MOF chemists and on the other side researchers in biology or bioinformatics working in proteomics.
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Affiliation(s)
- Siene Swinnen
- Department of Chemistry, KU Leuven, Celestijnenlaan 200F, Leuven, 3001, Belgium
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2
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Sobhani D, Djahaniani H, Duong A, Kazemian H. Efficient removal of microcystin-LR from contaminated water using water-stable MIL-100(Fe) synthesized under HF-free conditions. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024; 31:24512-24524. [PMID: 38443530 DOI: 10.1007/s11356-024-32675-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/16/2023] [Accepted: 02/23/2024] [Indexed: 03/07/2024]
Abstract
Cyanobacterial algal hepatotoxins, called microcystins (MCs), are a global health concern, necessitating research on effective removal methods from contaminated water bodies. In this study, we synthesized non-fluorine MIL-100(Fe) using an environmentally friendly room-temperature method and utilized it as an adsorbent to effectively remove microcystin-LR (MC-LR), which is the most toxic MC congener. MIL-100(Fe) was thoroughly characterized, and its adsorption process was investigated under various conditions. Results revealed rapid MC-LR adsorption, achieving 93% removal in just 5 min, with the pseudo-second-order kinetic model indicating chemisorption as the primary mechanism. The Langmuir isotherm model demonstrated a monolayer sorption capacity of 232.6 µg g-1 at room temperature, showing favorable adsorption. Furthermore, the adsorption capacity increased from 183 µg g-1 at 20 °C to 311 µg g-1 at 40 °C, indicating an endothermic process. Thermodynamic parameters supported MC-LR adsorption's spontaneous and feasible nature onto MIL-100(Fe). This study highlights MIL-100(Fe) as a promising method for effectively removing harmful biological pollutants, such as MC-LR, from contaminated water bodies in an environmentally friendly manner.
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Affiliation(s)
- Dorna Sobhani
- Natural Resources and Environmental Studies Institute, University of Northern British Columbia, Prince George, BC, Canada
- Northern Analytical Lab Services (Northern BC's Environment & Climate Solutions Innovation Hub), University of Northern British Columbia, Prince George, BC, Canada
| | - Hooreih Djahaniani
- Northern Analytical Lab Services (Northern BC's Environment & Climate Solutions Innovation Hub), University of Northern British Columbia, Prince George, BC, Canada
- Materials Technology & Environmental Research (MATTER) Lab, University of Northern British Columbia, Prince George, BC, Canada
| | - Ann Duong
- Natural Resources and Environmental Studies Institute, University of Northern British Columbia, Prince George, BC, Canada
| | - Hossein Kazemian
- Northern Analytical Lab Services (Northern BC's Environment & Climate Solutions Innovation Hub), University of Northern British Columbia, Prince George, BC, Canada.
- Materials Technology & Environmental Research (MATTER) Lab, University of Northern British Columbia, Prince George, BC, Canada.
- Environmental Sciences Program, Faculty of Environment, University of Northern British Columbia, Prince George, British Columbia, V2N4Z9, Canada.
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Huang T, Lei X, Wang S, Lin C, Wu X. Ionic liquid assisted in situ growth of nano-confined ionic liquids/metal-organic frameworks nanocomposites for monolithic capillary microextraction of microcystins in environmental waters. J Chromatogr A 2023; 1692:463849. [PMID: 36764066 DOI: 10.1016/j.chroma.2023.463849] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2022] [Revised: 01/22/2023] [Accepted: 02/02/2023] [Indexed: 02/07/2023]
Abstract
A facile in-situ ionothermal synthesis strategy for fabrication of ionic liquids/metal-organic frameworks (MOFs) (ILs@ZIF-8) nanocomposites hybrid monolith has been proposed to facilitate highly effective capillary microextraction (CME) of ultra-trace microcystins (MCs) in environmental waters. The ZnO nanoparticles (ZnO-NPs) were initially introduced into a precursor polymer monolith, and acted as the metal sources and anchoring seeds to construct ILs@ZIF-8 nanocomposites hybrid monolith via a nanoparticle-directed in-situ growth route in confined imidazolium ionic liquids. Detailed characterization based on scanning electron microscopy (SEM), X-ray diffraction (XRD) and N2 adsorption-desorption isotherms confirmed that both the morphology and porous structure of ZIF-8 were finely tuned by the incorporation of ILs, which acted as solvents and structure directing agent. The confinement of ILs in ZIF-8 framework endows the ILs@ZIF-8 hybrid monolith additional adsorption sites and satisfied water stability for the synergistic enhancement of adsorption efficiency of MCs via multiple interactions (including π-π stacking, hydrogen bonding, hydrophobic and electrostatic interactions). Coupling ILs@ZIF-8 hybrid monolith-based CME to LC-MS enabled an efficient and sensitive analysis of MCs in surface waters with ultra-low detection limits (LOD ≤ 1.4 ng L-1) and satisfactory recoveries (70.2%-107.0%). This study showed great potential for feasible design and fabrication of ILs@MOFs composites with synergistic and tunable structures toward efficient sample preparation applications.
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Affiliation(s)
- Ting Huang
- Key Laboratory for Analytical Science of Food Safety and Biology; College of Chemistry, Fuzhou University, Fuzhou 350116, China; International (HongKong Macao and Taiwan) Joint Laboratory on food safety and environmental analysis, Fuzhou University, Fuzhou 350116, China
| | - Xiaoyun Lei
- Key Laboratory for Analytical Science of Food Safety and Biology; College of Chemistry, Fuzhou University, Fuzhou 350116, China; International (HongKong Macao and Taiwan) Joint Laboratory on food safety and environmental analysis, Fuzhou University, Fuzhou 350116, China
| | - Shuqiang Wang
- Key Laboratory for Analytical Science of Food Safety and Biology; College of Chemistry, Fuzhou University, Fuzhou 350116, China; International (HongKong Macao and Taiwan) Joint Laboratory on food safety and environmental analysis, Fuzhou University, Fuzhou 350116, China
| | - Chenchen Lin
- Engineering Technology Research Center on Reagent and Instrument for Rapid Detection of Product Quality and Food Safety, Fuzhou 350116, China
| | - Xiaoping Wu
- Key Laboratory for Analytical Science of Food Safety and Biology; College of Chemistry, Fuzhou University, Fuzhou 350116, China; International (HongKong Macao and Taiwan) Joint Laboratory on food safety and environmental analysis, Fuzhou University, Fuzhou 350116, China.
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Ren H, Tianxiang W. Electrochemical Synthesis Methods of Metal‐Organic Frameworks and Their Environmental Analysis Applications: A Review. ChemElectroChem 2022. [DOI: 10.1002/celc.202200196] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Hao Ren
- Nanjing Normal University School of Environment CHINA
| | - Wei Tianxiang
- Nanjing Normal University No. 1 Wenyuan Road, Qixia District Nanjing CHINA
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5
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Metal-organic framework-based core-shell composites for chromatographic stationary phases. Trends Analyt Chem 2022. [DOI: 10.1016/j.trac.2022.116545] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Yang J, Si R, Wu G, Wang Y, Fang R, Liu F, Wang F, Lei H, Shen Y, Zhang Q, Wang H. Preparation of Specific Nanobodies and Their Application in the Rapid Detection of Nodularin-R in Water Samples. Foods 2021; 10:2758. [PMID: 34829042 PMCID: PMC8622565 DOI: 10.3390/foods10112758] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2021] [Revised: 10/28/2021] [Accepted: 11/05/2021] [Indexed: 11/25/2022] Open
Abstract
Nanobodies have several advantages, including great stability, sensibility, and ease of production; therefore, they have become important tools in immunoassays for chemical contaminants. In this manuscript, nanobodies for the detection of the toxin Nodularin-r (NOD-R), a secondary metabolite of cyanobacteria that could cause a safety risk for drinks and food for its strong hepatotoxicity, were for the first time selected from an immunized Bactrian camel VHH phage display library. Then, a sensitive indirect competitive enzyme-linked immunosorbent assay (ic-ELISA) for NOD-R, based on the nanobody N56 with great thermostability and organic solvent tolerance, was established under optimized conditions. The results showed that the limit of detection for NOD-R was 0.67 µg/L, and the average spike recovery rate was between 84.0 and 118.3%. Moreover, the ic-ELISA method was validated with spiked water sample and confirmed by UPLC-MS/MS, which indicated that the ic-ELISA established in this work is a reproducible detection assay for nodularin residues in water samples.
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Affiliation(s)
- Jinyi Yang
- Guangdong Provincial Key Laboratory of Food Quality and Safety, National-Local Joint Engineering Research Center for Processing and Safety Control of Livestock and Poultry Products, College of Food Science, South China Agricultural University, Guangzhou 510642, China; (J.Y.); (R.S.); (G.W.); (R.F.); (F.L.); (F.W.); (H.L.); (Y.S.)
| | - Rui Si
- Guangdong Provincial Key Laboratory of Food Quality and Safety, National-Local Joint Engineering Research Center for Processing and Safety Control of Livestock and Poultry Products, College of Food Science, South China Agricultural University, Guangzhou 510642, China; (J.Y.); (R.S.); (G.W.); (R.F.); (F.L.); (F.W.); (H.L.); (Y.S.)
| | - Guangpei Wu
- Guangdong Provincial Key Laboratory of Food Quality and Safety, National-Local Joint Engineering Research Center for Processing and Safety Control of Livestock and Poultry Products, College of Food Science, South China Agricultural University, Guangzhou 510642, China; (J.Y.); (R.S.); (G.W.); (R.F.); (F.L.); (F.W.); (H.L.); (Y.S.)
| | - Yu Wang
- Guangzhou Institute of Food Inspection, Guangzhou 510080, China;
| | - Ruyu Fang
- Guangdong Provincial Key Laboratory of Food Quality and Safety, National-Local Joint Engineering Research Center for Processing and Safety Control of Livestock and Poultry Products, College of Food Science, South China Agricultural University, Guangzhou 510642, China; (J.Y.); (R.S.); (G.W.); (R.F.); (F.L.); (F.W.); (H.L.); (Y.S.)
| | - Fei Liu
- Guangdong Provincial Key Laboratory of Food Quality and Safety, National-Local Joint Engineering Research Center for Processing and Safety Control of Livestock and Poultry Products, College of Food Science, South China Agricultural University, Guangzhou 510642, China; (J.Y.); (R.S.); (G.W.); (R.F.); (F.L.); (F.W.); (H.L.); (Y.S.)
| | - Feng Wang
- Guangdong Provincial Key Laboratory of Food Quality and Safety, National-Local Joint Engineering Research Center for Processing and Safety Control of Livestock and Poultry Products, College of Food Science, South China Agricultural University, Guangzhou 510642, China; (J.Y.); (R.S.); (G.W.); (R.F.); (F.L.); (F.W.); (H.L.); (Y.S.)
| | - Hongtao Lei
- Guangdong Provincial Key Laboratory of Food Quality and Safety, National-Local Joint Engineering Research Center for Processing and Safety Control of Livestock and Poultry Products, College of Food Science, South China Agricultural University, Guangzhou 510642, China; (J.Y.); (R.S.); (G.W.); (R.F.); (F.L.); (F.W.); (H.L.); (Y.S.)
| | - Yudong Shen
- Guangdong Provincial Key Laboratory of Food Quality and Safety, National-Local Joint Engineering Research Center for Processing and Safety Control of Livestock and Poultry Products, College of Food Science, South China Agricultural University, Guangzhou 510642, China; (J.Y.); (R.S.); (G.W.); (R.F.); (F.L.); (F.W.); (H.L.); (Y.S.)
| | - Qi Zhang
- Oil Crops Research Institute, Chinese Academy of Agricultural Sciences, Xudong 2nd Road No. 2, Wuchang District, Wuhan 430062, China;
| | - Hong Wang
- Guangdong Provincial Key Laboratory of Food Quality and Safety, National-Local Joint Engineering Research Center for Processing and Safety Control of Livestock and Poultry Products, College of Food Science, South China Agricultural University, Guangzhou 510642, China; (J.Y.); (R.S.); (G.W.); (R.F.); (F.L.); (F.W.); (H.L.); (Y.S.)
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Sheibani E, Hosseini A, Sobhani Nasab A, Adib K, Ganjali MR, Pourmortazavi SM, Ahmadi F, Marzi Khosrowshahi E, Mirsadeghi S, Rahimi-Nasrabadi M, Ehrlich H. Application of polysaccharide biopolymers as natural adsorbent in sample preparation. Crit Rev Food Sci Nutr 2021; 63:2626-2653. [PMID: 34554043 DOI: 10.1080/10408398.2021.1978385] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/07/2022]
Abstract
Preparing samples for analyses is perhaps the most important part to analyses. The varied functional groups present on the surface of biopolymers bestow them appropriate adsorption properties. Properties like biocompatibility, biodegradability, presence of different surface functional group, high porosity, considerable absorption capacity for water, the potential for modification, etc. turn biopolymers to promising candidates for varied applications. In addition, one of the most important parts of determination of an analyte in a matrix is sample preparation step and the efficiency of this step in solid phase extraction methods is largely dependent on the type of adsorbent used. Due to the unique properties of biopolymers they are considered an appropriate choice for using as sorbent in sample preparation methods that use from a solid adsorbent. Many review articles have been published on the application of diverse adsorbents in sample preparation methods, however despite the numerous advantages of biopolymers mentioned; review articles in this field are very few. Thus, in this paper we review the reports in different areas of sample preparation that use polysaccharides-based biopolymers as sorbents for extraction and determination of diverse organic and inorganic analytes.
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Affiliation(s)
| | - Asieh Hosseini
- Razi Drug Research Center, Iran University of Medical Sciences, Tehran, Iran
| | - Ali Sobhani Nasab
- Autoimmune Diseases Research Center, Kashan University of Medical Sciences, Kashan, Iran.,Core Research Lab, Kashan University of Medical Sciences, Kashan, Iran
| | - Kourosh Adib
- Department of Chemistry, Faculty of Basic Sciences, Imam Hossein University, Tehran, Iran
| | - Mohammad Reza Ganjali
- Center of Excellence in Electrochemistry, School of Chemistry, College of Science, University of Tehran, Tehran, Iran.,Biosensor Research Center, Endocrinology and Metabolism Molecular Cellular Sciences Institute, Tehran University of Medical Sciences, Tehran, Iran
| | | | - Farhad Ahmadi
- Physiology Research Center, Iran University of Medical Sciences, Tehran, Iran.,Department of Medicinal Chemistry, School of Pharmacy-International Campus, Iran University of Medical Sciences, Tehran Iran
| | | | - Somayeh Mirsadeghi
- Endocrinology and Metabolism Research Center, Endocrinology and Metabolism Clinical Sciences Institute, Tehran University of Medical Sciences, Tehran, Iran
| | - Mehdi Rahimi-Nasrabadi
- Molecular Biology Research Center, Systems Biology and Poisonings Institute, Baqiyatallah University of Medical Sciences, Tehran, Iran.,Faculty of Pharmacy, Baqiyatallah University of Medical Sciences, Tehran, Iran.,Institute of Electronic and Sensor Materials, TU Bergakademie, Freiberg, Germany
| | - Hermann Ehrlich
- Institute of Electronic and Sensor Materials, TU Bergakademie, Freiberg, Germany.,Centre for Climate Change Research, Toronto, Ontario, Canada.,A.R. Environmental Solutions, ICUBE-University of Toronto Mississauga, Mississauga, Ontario, Canada.,Center for Advanced Technology, Adam Mickiewicz University, Poznan, Poland
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Yang Y, Dong J, Li H, Guo D, Yang W, Pan Q. AIE Infinite Coordination Polymer for Phosphate Ion Detection via Aggregation State Modulation. ChemistrySelect 2020. [DOI: 10.1002/slct.202003449] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Affiliation(s)
- Yang Yang
- Key Laboratory of Advanced Materials of Tropical Island Resources of Ministry of Education School of Science Hainan University Haikou 570228 China
| | - Jiaxuan Dong
- Key Laboratory of Advanced Materials of Tropical Island Resources of Ministry of Education School of Science Hainan University Haikou 570228 China
| | - Huihui Li
- Key Laboratory of Advanced Materials of Tropical Island Resources of Ministry of Education School of Science Hainan University Haikou 570228 China
| | - Dongyu Guo
- Department of Clinical Laboratory Xiamen Huli Guoyu Clinic, Co., Ltd. Xiamen 361000 China
| | - Weiting Yang
- Key Laboratory of Advanced Materials of Tropical Island Resources of Ministry of Education School of Science Hainan University Haikou 570228 China
| | - Qinhe Pan
- Key Laboratory of Advanced Materials of Tropical Island Resources of Ministry of Education School of Science Hainan University Haikou 570228 China
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