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Milani NBL, van Gilst E, Pirok BWJ, Schoenmakers PJ. Comprehensive two-dimensional gas chromatography- A discussion on recent innovations. J Sep Sci 2023; 46:e2300304. [PMID: 37654057 DOI: 10.1002/jssc.202300304] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2023] [Revised: 08/16/2023] [Accepted: 08/19/2023] [Indexed: 09/02/2023]
Abstract
Although comprehensive 2-D GC is an established and often applied analytical method, the field is still highly dynamic thanks to a remarkable number of innovations. In this review, we discuss a number of recent developments in comprehensive 2-D GC technology. A variety of modulation methods are still being actively investigated and many exciting improvements are discussed in this review. We also review interesting developments in detection methods, retention modeling, and data analysis.
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Affiliation(s)
- Nino B L Milani
- Van't Hoff Institute for Molecular Science (HIMS), University of Amsterdam, Amsterdam, the Netherlands
| | - Eric van Gilst
- Van't Hoff Institute for Molecular Science (HIMS), University of Amsterdam, Amsterdam, the Netherlands
| | - Bob W J Pirok
- Van't Hoff Institute for Molecular Science (HIMS), University of Amsterdam, Amsterdam, the Netherlands
| | - Peter J Schoenmakers
- Van't Hoff Institute for Molecular Science (HIMS), University of Amsterdam, Amsterdam, the Netherlands
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2
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Squara S, Manig F, Henle T, Hellwig M, Caratti A, Bicchi C, Reichenbach SE, Tao Q, Collino M, Cordero C. Extending the breadth of saliva metabolome fingerprinting by smart template strategies and effective pattern realignment on comprehensive two-dimensional gas chromatographic data. Anal Bioanal Chem 2023; 415:2493-2509. [PMID: 36631574 PMCID: PMC10149478 DOI: 10.1007/s00216-023-04516-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2022] [Revised: 12/16/2022] [Accepted: 01/03/2023] [Indexed: 01/13/2023]
Abstract
Comprehensive two-dimensional gas chromatography with time-of-flight mass spectrometry (GC × GC-TOFMS) is one the most powerful analytical platforms for chemical investigations of complex biological samples. It produces large datasets that are rich in information, but highly complex, and its consistency may be affected by random systemic fluctuations and/or changes in the experimental parameters. This study details the optimization of a data processing strategy that compensates for severe 2D pattern misalignments and detector response fluctuations for saliva samples analyzed across 2 years. The strategy was trained on two batches: one with samples from healthy subjects who had undergone dietary intervention with high/low-Maillard reaction products (dataset A), and the second from healthy/unhealthy obese individuals (dataset B). The combined untargeted and targeted pattern recognition algorithm (i.e., UT fingerprinting) was tuned for key process parameters, the signal-to-noise ratio (S/N), and MS spectrum similarity thresholds, and then tested for the best transform function (global or local, affine or low-degree polynomial) for pattern realignment in the temporal domain. Reliable peak detection achieved its best performance, computed as % of false negative/positive matches, with a S/N threshold of 50 and spectral similarity direct match factor (DMF) of 700. Cross-alignment of bi-dimensional (2D) peaks in the temporal domain was fully effective with a supervised operation including multiple centroids (reference peaks) and a match-and-transform strategy using affine functions. Regarding the performance-derived response fluctuations, the most promising strategy for cross-comparative analysis and data fusion included the mass spectral total useful signal (MSTUS) approach followed by Z-score normalization on the resulting matrix.
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Affiliation(s)
- Simone Squara
- Dipartimento Di Scienza E Tecnologia del Farmaco, Università Degli Studi Di Torino, Via Pietro Giuria 9, 10125, Turin, Italy
| | - Friederike Manig
- Food Chemistry, Technische Universität Dresden, Dresden, Germany
| | - Thomas Henle
- Food Chemistry, Technische Universität Dresden, Dresden, Germany
| | - Michael Hellwig
- Special Food Chemistry, Technische Universität Dresden, Dresden, Germany
| | - Andrea Caratti
- Dipartimento Di Scienza E Tecnologia del Farmaco, Università Degli Studi Di Torino, Via Pietro Giuria 9, 10125, Turin, Italy
| | - Carlo Bicchi
- Dipartimento Di Scienza E Tecnologia del Farmaco, Università Degli Studi Di Torino, Via Pietro Giuria 9, 10125, Turin, Italy
| | - Stephen E Reichenbach
- Computer Science and Engineering Department, University of Nebraska, Lincoln, NE, USA.,GC Image LLC, Lincoln, NE, USA
| | | | - Massimo Collino
- Dipartimento Di Neuroscienze "Rita Levi Montalcini", University of Turin, Turin, Italy.
| | - Chiara Cordero
- Dipartimento Di Scienza E Tecnologia del Farmaco, Università Degli Studi Di Torino, Via Pietro Giuria 9, 10125, Turin, Italy.
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3
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Stilo F, Alladio E, Squara S, Bicchi C, Vincenti M, Reichenbach SE, Cordero C, Bizzo HR. Delineating unique and discriminant chemical traits in Brazilian and Italian extra-virgin olive oils by quantitative 2D-fingerprinting and pattern recognition algorithms. J Food Compost Anal 2023. [DOI: 10.1016/j.jfca.2022.104899] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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4
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Cordero C, Birch C. Multidimensional Gas Chromatography Moves Forward. LCGC EUROPE 2022. [DOI: 10.56530/lcgc.eu.bj8777l1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/03/2022]
Abstract
In this extended special feature to celebrate the 35th anniversary edition of LCGC Europe, leading figures from the separation science community explore contemporary trends in separation science and identify possible future developments.
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5
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Zanella D, Henin A, Mascrez S, Stefanuto P, Franchina FA, Focant J, Purcaro G. Comprehensive two-dimensional gas chromatographic platforms comparison for exhaled breath metabolites analysis. J Sep Sci 2022; 45:3542-3555. [PMID: 35853166 PMCID: PMC9804543 DOI: 10.1002/jssc.202200164] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2022] [Revised: 07/13/2022] [Accepted: 07/13/2022] [Indexed: 01/05/2023]
Abstract
The high potential of exhaled breath for disease diagnosis has been highlighted in numerous studies. However, exhaled breath analysis is suffering from a lack of standardized sampling and analysis procedures, impacting the robustness of inter-laboratory results, and thus hampering proper external validation. The aim of this work was to verify compliance and validate the performance of two different comprehensive two-dimensional gas chromatography coupled to mass spectrometry platforms in different laboratories by monitoring probe metabolites in exhaled breath following the Peppermint Initiative guidelines. An initial assessment of the exhaled breath sampling conditions was performed, selecting the most suitable sampling bag material and volume. Then, a single sampling was performed using Tedlar bags, followed by the trapping of the volatile organic compounds into thermal desorption tubes for the subsequent analysis using two different analytical platforms. The thermal desorption tubes were first analyzed by a (cryogenically modulated) comprehensive two-dimensional gas chromatography system coupled to high-resolution time-of-flight mass spectrometry. The desorption was performed in split mode and the split part was recollected in the same tube and further analyzed by a different (flow modulated) comprehensive two-dimensional gas chromatography system with a parallel detection, specifically using a quadrupole mass spectrometer and a vacuum ultraviolet detector. Both the comprehensive two-dimensional gas chromatography platforms enabled the longitudinal tracking of the peppermint oil metabolites in exhaled breath. The increased sensitivity of comprehensive two-dimensional gas chromatography enabled to successfully monitor over a 6.5 h period a total of 10 target compounds, namely α-pinene, camphene, β-pinene, limonene, cymene, eucalyptol, menthofuran, menthone, isomenthone, and neomenthol.
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Affiliation(s)
- Delphine Zanella
- Molecular System, Organic & Biological Analytical Chemistry GroupUniversity of LiègeLiègeBelgium
| | - Adèle Henin
- Molecular System, Organic & Biological Analytical Chemistry GroupUniversity of LiègeLiègeBelgium
| | - Steven Mascrez
- Gembloux Agro‐Bio TechUniversity of LiègeGemblouxBelgium
| | - Pierre‐Hugues Stefanuto
- Molecular System, Organic & Biological Analytical Chemistry GroupUniversity of LiègeLiègeBelgium
| | - Flavio Antonio Franchina
- Department of Chemistry, Pharmaceutical, and Agricultural SciencesUniversity of FerraraFerraraItaly
| | - Jean‐François Focant
- Molecular System, Organic & Biological Analytical Chemistry GroupUniversity of LiègeLiègeBelgium
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Ševčík V, Andraščíková M, Vavrouš A, Moulisová A, Vrbík K, Bendová H, Jírová D, Kejlová K, Hložek T. Market surveillance: analysis of perfuming products for presence of allergens and prohibited substances. CHEMICAL PAPERS 2022. [DOI: 10.1007/s11696-022-02225-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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7
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Cai H, Stearns SD. Comprehensive two-dimensional gas chromatography using direct flow modulation to extend the secondary dimension separation time. J Chromatogr A 2022; 1669:462930. [DOI: 10.1016/j.chroma.2022.462930] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2022] [Revised: 03/01/2022] [Accepted: 03/02/2022] [Indexed: 11/16/2022]
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Mikaliunaite L, Sudol PE, Cain CN, Synovec RE. Baseline correction method for dynamic pressure gradient modulated comprehensive two-dimensional gas chromatography with flame ionization detection. J Chromatogr A 2021; 1652:462358. [PMID: 34237483 DOI: 10.1016/j.chroma.2021.462358] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2021] [Revised: 06/16/2021] [Accepted: 06/17/2021] [Indexed: 11/18/2022]
Abstract
A baseline correction method is developed for comprehensive two-dimensional (2D) chromatography (GC × GC) with flame-ionization detection (FID) using dynamic pressure gradient modulation (DPGM). The DPGM-GC × GC-FID utilized porous layer open tubular (PLOT) columns in both dimensions to focus on light hydrocarbon separations. Since DPGM is nominally a stop-flow modulation technique, a rhythmic baseline disturbance is observed in the FID signal that cycles with the modulation period (PM). This baseline disturbance needs to be corrected to optimize trace analysis. The baseline correction method has three steps: collection of a background "blank" chromatogram and multiplying it by an optimized normalization factor, subtraction of the normalization-optimized background chromatogram from a sample chromatogram, and application of Savitzky-Golay smoothing. An alkane standard solution, containing pentane, hexane and heptane was used for method development, producing linear calibration curves (r2 > 0.991) over a broad concentration range (7.8 ppm - 4000 ppm). Further, the limit-of-detection (LOD) and limit-of-quantification (LOQ) were determined for pentane (LOD = 2.5 ppm, LOQ = 8.2 ppm), hexane (LOD = 0.9 ppm, LOQ = 3.0 ppm), and heptane (LOD = 1.9 ppm, LOQ = 6.4 ppm). A natural gas sample separation illustrated method applicability, whereby the DPGM produced a signal enhancement (SE) of 30 for isopentane, where SE is defined as the height of the tallest 2D peak in the modulated chromatogram for the analyte divided by the height of the unmodulated 1D peak. The 30-fold SE resulted in about a 10-fold improvement in the signal-to-noise ratio (S/N) for isopentane. Additional versatility of the baseline correction method for more complicated samples was demonstrated for an unleaded gasoline sample, which enabled the detection (and visual appearance) of trace components.
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Affiliation(s)
- Lina Mikaliunaite
- Department of Chemistry, University of Washington, Box 351700, Seattle, WA 98195, USA
| | - Paige E Sudol
- Department of Chemistry, University of Washington, Box 351700, Seattle, WA 98195, USA
| | - Caitlin N Cain
- Department of Chemistry, University of Washington, Box 351700, Seattle, WA 98195, USA
| | - Robert E Synovec
- Department of Chemistry, University of Washington, Box 351700, Seattle, WA 98195, USA.
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9
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Stilo F, Segura Borrego MDP, Bicchi C, Battaglino S, Callejón Fernadez RM, Morales ML, Reichenbach SE, McCurry J, Peroni D, Cordero C. Delineating the extra-virgin olive oil aroma blueprint by multiple headspace solid phase microextraction and differential-flow modulated comprehensive two-dimensional gas chromatography. J Chromatogr A 2021; 1650:462232. [PMID: 34051578 DOI: 10.1016/j.chroma.2021.462232] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2021] [Revised: 04/26/2021] [Accepted: 04/30/2021] [Indexed: 01/08/2023]
Abstract
Comprehensive two-dimensional gas chromatography with parallel mass spectrometry and flame ionization detection (GC × GC-MS/FID) enables effective chromatographic fingerprinting of complex samples by comprehensively mapping untargeted and targeted components. Moreover, the complementary characteristics of MS and FID open the possibility of performing multi-target quantitative profiling with great accuracy. If this synergy is applied to the complex volatile fraction of food, sample preparation is crucial and requires appropriate methodologies capable of providing true quantitative results. In this study, untargeted/targeted (UT) fingerprinting of extra-virgin olive oil volatile fractions is combined with accurate quantitative profiling by multiple headspace solid phase microextraction (MHS-SPME). External calibration on fifteen pre-selected analytes and FID predicted relative response factors (RRFs) enable the accurate quantification of forty-two analytes in total, including key-aroma compounds, potent odorants, and olive oil geographical markers. Results confirm good performances of comprehensive UT fingerprinting in developing classification models for geographical origin discrimination, while quantification by MHS-SPME provides accurate results and guarantees data referability and results transferability over years. Moreover, by this approach the extent of internal standardization procedure inaccuracy, largely adopted in food volatiles profiling, is measured. Internal standardization yielded an average relative error of 208 % for the fifteen calibrated compounds, with an overestimation of + 538% for (E)-2-hexenal, the most abundant yet informative volatile of olive oil, and a -89% and -80% for (E)-2-octenal and (E)-2-nonenal respectively, analytes with a lower HS distribution constant. Compared to existing methods based on 1D-GC, the current procedure offers better separation power and chromatographic resolution that greatly improve method specificity and selectivity and results in lower LODs and LOQs, high calibration performances (i.e., R2 and residual distribution), and wider linear range of responses. As an artificial intelligence smelling machine, the MHS-SPME-GC × GC-MS/FID method is here adopted to delineate extra-virgin olive oil aroma blueprints; an objective tool with great flexibility and reliability that can improve the quality and information power of each analytical run.
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Affiliation(s)
- Federico Stilo
- University of Turin, Dipartimento di Scienza e Tecnologia del Farmaco, Turin, Italy
| | - Maria Del Pilar Segura Borrego
- Área de Nutrición y Bromatología, Dpto. de Nutrición y Bromatología, Toxicología y Medicina Legal, Facultad de Farmacia, Universidad de Sevilla, Sevilla, Spain
| | - Carlo Bicchi
- University of Turin, Dipartimento di Scienza e Tecnologia del Farmaco, Turin, Italy
| | - Sonia Battaglino
- Área de Nutrición y Bromatología, Dpto. de Nutrición y Bromatología, Toxicología y Medicina Legal, Facultad de Farmacia, Universidad de Sevilla, Sevilla, Spain
| | - Raquel Maria Callejón Fernadez
- Área de Nutrición y Bromatología, Dpto. de Nutrición y Bromatología, Toxicología y Medicina Legal, Facultad de Farmacia, Universidad de Sevilla, Sevilla, Spain
| | - Maria Lourdes Morales
- Área de Nutrición y Bromatología, Dpto. de Nutrición y Bromatología, Toxicología y Medicina Legal, Facultad de Farmacia, Universidad de Sevilla, Sevilla, Spain
| | - Stephen E Reichenbach
- Computer Science and Engineering Department, University of Nebraska - Lincoln, Lincoln, NE, USA; GC Image LLC, Lincoln, NE, USA
| | - James McCurry
- Agilent Technologies, Gas Phase Separations Division, Wilmington DE, USA
| | | | - Chiara Cordero
- University of Turin, Dipartimento di Scienza e Tecnologia del Farmaco, Turin, Italy.
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10
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Zanella D, Focant J, Franchina FA. 30
th
Anniversary of comprehensive two‐dimensional gas chromatography: Latest advances. ACTA ACUST UNITED AC 2021. [DOI: 10.1002/ansa.202000142] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Delphine Zanella
- Molecular System, Organic & Biological Analytical Chemistry Group University of Liège Liège Belgium
| | - Jean‐François Focant
- Molecular System, Organic & Biological Analytical Chemistry Group University of Liège Liège Belgium
| | - Flavio A. Franchina
- Molecular System, Organic & Biological Analytical Chemistry Group University of Liège Liège Belgium
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11
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Stilo F, Bicchi C, Jimenez-Carvelo AM, Cuadros-Rodriguez L, Reichenbach SE, Cordero C. Chromatographic fingerprinting by comprehensive two-dimensional chromatography: Fundamentals and tools. Trends Analyt Chem 2021. [DOI: 10.1016/j.trac.2020.116133] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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