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van den Hurk RS, Lagerwaard B, Terlouw NJ, Sun M, Tieleman JJ, Verstegen AX, Samanipour S, Pirok BW, Gargano AF. Comprehensive Two-Dimensional Liquid Chromatography-High-Resolution Mass Spectrometry for Complex Protein Digest Analysis Using Parallel Gradients. Anal Chem 2024; 96:9294-9301. [PMID: 38758734 PMCID: PMC11154668 DOI: 10.1021/acs.analchem.4c02172] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2024] [Accepted: 05/01/2024] [Indexed: 05/19/2024]
Abstract
Despite the high gain in peak capacity, online comprehensive two-dimensional liquid chromatography coupled with high-resolution mass spectrometry (LC × LC-HRMS) has not yet been widely applied to the analysis of complex protein digests. One reason is the method's reduced sensitivity which can be linked to the high flow rates of the second separation dimension (2D). This results in higher dilution factors and the need for flow splitters to couple to ESI-MS. This study reports proof-of-principle results of the development of an RPLC × RPLC-HRMS method using parallel gradients (2D flow rate of 0.7 mL min-1) and its comparison to shifted gradient methods (2D of 1.4 mL min-1) for the analysis of complex digests using HRMS (QExactive-Plus MS). Shifted and parallel gradients resulted in high surface coverage (SC) and effective peak capacity (SC of 0.6226 and 0.7439 and effective peak capacity of 779 and 757 in 60 min). When applied to a cell line digest sample, parallel gradients allowed higher sensitivity (e.g., average MS intensity increased by a factor of 3), allowing for a higher number of identifications (e.g., about 2600 vs 3900 peptides). In addition, reducing the modulation time to 10 s significantly increased the number of MS/MS events that could be performed. When compared to a 1D-RPLC method, parallel RPLC × RPLC-HRMS methods offered a higher separation performance (FHWH from 0.12 to 0.018 min) with limited sensitivity losses resulting in an increase of analyte identifications (e.g., about 6000 vs 7000 peptides and 1500 vs 1990 proteins).
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Affiliation(s)
- Rick S. van den Hurk
- Analytical
Chemistry Group, Van’t Hoff Institute for Molecular Sciences, University of Amsterdam, Amsterdam1098 XH,The Netherlands
- Centre
for Analytical Sciences Amsterdam (CASA), Amsterdam1098 XH,The Netherlands
| | - Bart Lagerwaard
- Analytical
Chemistry Group, Van’t Hoff Institute for Molecular Sciences, University of Amsterdam, Amsterdam1098 XH,The Netherlands
- Centre
for Analytical Sciences Amsterdam (CASA), Amsterdam1098 XH,The Netherlands
| | - Nathan J. Terlouw
- Analytical
Chemistry Group, Van’t Hoff Institute for Molecular Sciences, University of Amsterdam, Amsterdam1098 XH,The Netherlands
- Centre
for Analytical Sciences Amsterdam (CASA), Amsterdam1098 XH,The Netherlands
| | - Mingzhe Sun
- Analytical
Chemistry Group, Van’t Hoff Institute for Molecular Sciences, University of Amsterdam, Amsterdam1098 XH,The Netherlands
- Centre
for Analytical Sciences Amsterdam (CASA), Amsterdam1098 XH,The Netherlands
| | - Job J. Tieleman
- Analytical
Chemistry Group, Van’t Hoff Institute for Molecular Sciences, University of Amsterdam, Amsterdam1098 XH,The Netherlands
- Centre
for Analytical Sciences Amsterdam (CASA), Amsterdam1098 XH,The Netherlands
| | - Anniek X. Verstegen
- Analytical
Chemistry Group, Van’t Hoff Institute for Molecular Sciences, University of Amsterdam, Amsterdam1098 XH,The Netherlands
- Centre
for Analytical Sciences Amsterdam (CASA), Amsterdam1098 XH,The Netherlands
| | - Saer Samanipour
- Analytical
Chemistry Group, Van’t Hoff Institute for Molecular Sciences, University of Amsterdam, Amsterdam1098 XH,The Netherlands
- Centre
for Analytical Sciences Amsterdam (CASA), Amsterdam1098 XH,The Netherlands
| | - Bob W.J. Pirok
- Analytical
Chemistry Group, Van’t Hoff Institute for Molecular Sciences, University of Amsterdam, Amsterdam1098 XH,The Netherlands
- Centre
for Analytical Sciences Amsterdam (CASA), Amsterdam1098 XH,The Netherlands
| | - Andrea F.G. Gargano
- Analytical
Chemistry Group, Van’t Hoff Institute for Molecular Sciences, University of Amsterdam, Amsterdam1098 XH,The Netherlands
- Centre
for Analytical Sciences Amsterdam (CASA), Amsterdam1098 XH,The Netherlands
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Wabnitz C, Canavan A, Chen W, Reisbeck M, Bakkour R. Quartz Crystal Microbalance as a Holistic Detector for Quantifying Complex Organic Matrices during Liquid Chromatography: 1. Coupling, Characterization, and Validation. Anal Chem 2024; 96:7429-7435. [PMID: 38683884 PMCID: PMC11099895 DOI: 10.1021/acs.analchem.3c05440] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/02/2024]
Abstract
A matrix in highly complex samples can cause adverse effects on the trace analysis of targeted organic compounds. A suitable separation of the target analyte(s) and matrix before the instrumental analysis is often a vital step for which chromatographic cleanup methods remain one of the most frequently used strategies, particularly high-performance liquid chromatography (HPLC). The lack of a simple real-time detection technique that can quantify the entirety of the matrix during this step, especially with gradient solvents, renders optimization of the cleanup challenging. This paper, along with a companion one, explores the possibilities and limitations of quartz crystal microbalance (QCM) dry-mass sensing for quantifying complex organic matrices during gradient HPLC. To this end, this work coupled a QCM and a microfluidic spray dryer with a commercial HPLC system using a flow splitter and developed a calibration and data processing strategy. The system was characterized in terms of detection and quantification limits, with LOD = 4.3-15 mg/L and LOQ = 16-52 mg/L, respectively, for different eluent compositions. Validation of natural organic matter in an environmental sample against offline total organic carbon analysis confirmed the approach's feasibility, with an absolute recovery of 103 ± 10%. Our findings suggest that QCM dry-mass sensing could serve as a valuable tool for analysts routinely employing HPLC cleanup methods, offering potential benefits across various analytical fields.
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Affiliation(s)
- Christopher Wabnitz
- TUM School of Natural Sciences, Chair of Analytical Chemistry and Water Chemistry, Technical University of Munich, Garching 85748, Germany
| | - Aoife Canavan
- TUM School of Natural Sciences, Chair of Analytical Chemistry and Water Chemistry, Technical University of Munich, Garching 85748, Germany
| | - Wei Chen
- TUM School of Natural Sciences, Chair of Analytical Chemistry and Water Chemistry, Technical University of Munich, Garching 85748, Germany
| | - Mathias Reisbeck
- TUM School of Computation, Information and Technology, Heinz Nixdorf Chair of Biomedical Electronics, Technical University of Munich, Munich 81675, Germany
| | - Rani Bakkour
- TUM School of Natural Sciences, Chair of Analytical Chemistry and Water Chemistry, Technical University of Munich, Garching 85748, Germany
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A comprehensive review of liquid chromatography hyphenated to post-column photoinduced fluorescence detection system for determination of analytes. ARAB J CHEM 2022. [DOI: 10.1016/j.arabjc.2022.104091] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023] Open
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Broeckhoven K, Desmet G. Theory of separation performance and peak width in gradient elution liquid chromatography: A tutorial. Anal Chim Acta 2022; 1218:339962. [PMID: 35701036 DOI: 10.1016/j.aca.2022.339962] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/25/2021] [Revised: 04/06/2022] [Accepted: 05/18/2022] [Indexed: 11/26/2022]
Abstract
Separation performance in chromatography has been extensively studied since the dawn of the technique. Although the basic principles of band broadening and the resulting separation performance in isocratic elution are in general well known and understood, this is much less the case for gradient separations. In this tutorial, first the basic principles, concepts and parameters that determine separation performance, peak width and variance and analysis time in isocratic separations are reviewed. This is subsequently used to discuss the parameters that affect peak width in gradient elution, together with the concepts of plate count and plate height in this elution mode. In addition, the effect of peak compression in gradient elution is elaborated. Finally, the effect of extra-column dispersion on separation performance in gradient elution is discussed, and an overview of how these contributions can be experimentally evaluated is given.
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Affiliation(s)
- Ken Broeckhoven
- Vrije Universiteit Brussel, Pleinlaan 2, 1050, Brussel, Belgium.
| | - Gert Desmet
- Vrije Universiteit Brussel, Pleinlaan 2, 1050, Brussel, Belgium
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Peak broadening caused by using different micro-liquid chromatography detectors. Anal Bioanal Chem 2022; 414:6107-6114. [PMID: 35705858 DOI: 10.1007/s00216-022-04170-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2022] [Revised: 06/01/2022] [Accepted: 06/07/2022] [Indexed: 11/01/2022]
Abstract
Advancements in column technology resulted in smaller particles and more efficient phases. In parallel, the use of columns with reduced dimensions is becoming more common. This means the effective column volume is also decreased, thereby making the systems more susceptible to effects of band broadening due to extra-column volume. Despite these trends and the fact that a growing number of miniaturized liquid chromatography systems are being offered commercially, manufacturers often stick to the modular concept with dedicated units for pumps, column oven, and detectors. This modular design results in long connection capillaries, which leads to extra-column band broadening and consequently prevents the exploitation of the intrinsic efficiency of state-of-the-art columns. In particular, band broadening post column has a considerable negative effect on efficiency. In this study, mass flow and concentration-dependent detectors were examined for their influence on band broadening using a micro-LC system. A mass spectrometric detector, an evaporative light scattering detector, two UV detectors, and a previously undescribed fluorescence detector were compared. The influence on efficiency is compared using plate height vs linear velocity data and peak variance. It is shown that an increase in the inner diameter after the post-column transfer capillary leads to significant loss in plate height. Comparing the UV detectors, it could be shown that the dispersion was reduced by 38% by the reduction of the post-column volume. The largest variance was found for the evaporative light scattering detector, which was 368% higher compared to the variance of the detector with the least effect on band broadening.
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Mostafa ME, Grinias JP, Edwards JL. Evaluation of Nanospray Capillary LC-MS Performance for Metabolomic Analysis in Complex Biological Matrices. J Chromatogr A 2022; 1670:462952. [DOI: 10.1016/j.chroma.2022.462952] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2021] [Revised: 03/05/2022] [Accepted: 03/07/2022] [Indexed: 11/29/2022]
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Marks RGH, Jochmann MA, Brand WA, Schmidt TC. How to Couple LC-IRMS with HRMS─A Proof-of-Concept Study. Anal Chem 2022; 94:2981-2987. [PMID: 35107978 DOI: 10.1021/acs.analchem.1c05226] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Compound-specific stable isotope analysis (CSIA) is a unique analytical technique for determining small variations in isotope ratios of light isotopes in analytes from complex mixtures. A problem of CSIA using gas chromatography (GC) and liquid chromatography-isotope ratio mass spectrometry (LC-IRMS) is that any structural information of the analytes is lost due to the processes involved in determining the isotope ratio. To obtain the isotopic composition of, for example, carbon from organic compounds, all carbon in each analyte is quantitatively converted to CO2. For GC-IRMS, open split GC-IRMS-MS couplings have been described that allow additional acquisition of structural information of analytes and interferences. Structural analysis using LC-IRMS is more difficult and requires additional technical and instrumental efforts. In this study, LC was combined for the first time with simultaneous analysis by IRMS and high-resolution mass spectrometry (HRMS), enabling the direct identification of unknown or coeluting species. We have thoroughly investigated and optimized the coupling and showed how technical problems, arising from instrumental conditions, can be overcome. To this end, it was successfully demonstrated that a consistent split ratio between IRMS and HRMS could be obtained using a variable postcolumn flow splitter. This coupling provided reproducible results in terms of resulting peak areas, isotope values, and retention time differences for the two mass spectrometer systems. To demonstrate the applicability of the coupling, we chose to address an important question regarding the purity of international isotope standards. In this context, we were able to confirm that the USGS41 reference material indeed contains substantial amounts of pyroglutamic acid as suggested previously in the literature. Moreover, the replacement material, USGS41a, still has significant amounts of pyroglutamic acid as impurity, rendering some caution necessary when using this material for isotopic calibration.
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Affiliation(s)
- Robert G H Marks
- Instrumental Analytical Chemistry, University of Duisburg-Essen, Universitätsstraße 5, 45141 Essen, Germany
| | - Maik A Jochmann
- Instrumental Analytical Chemistry, University of Duisburg-Essen, Universitätsstraße 5, 45141 Essen, Germany
| | - Willi A Brand
- Max Planck Institute for Biogeochemistry, Hans-Knöll-Strasse 10, 07745 Jena, Germany
| | - Torsten C Schmidt
- Instrumental Analytical Chemistry, University of Duisburg-Essen, Universitätsstraße 5, 45141 Essen, Germany.,Centre for Water and Environmental Research (ZWU), University of Duisburg-Essen, Universitätsstraße 2, 45141 Essen, Germany
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Chapel S, Heinisch S. Strategies to circumvent the solvent strength mismatch problem in online comprehensive two-dimensional liquid chromatography. J Sep Sci 2021; 45:7-26. [PMID: 34525266 DOI: 10.1002/jssc.202100534] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2021] [Revised: 08/23/2021] [Accepted: 08/24/2021] [Indexed: 11/09/2022]
Abstract
On-line comprehensive two-dimensional liquid chromatography is a powerful technique for the separation of highly complex samples. Due to the addition of the second dimension of separation, impressive peak capacities can be obtained within a reasonable analysis time compared to one-dimensional liquid chromatography. In online comprehensive two-dimensional liquid chromatography, the separation power is maximized by selecting two separation dimensions as orthogonal as possible, which most often requires the combination of different mobile phases and stationary phases. The online transfer of a given solvent from the first dimension to the second dimension may cause severe injection effects in the second dimension, mostly due to solvent strength mismatch. Those injection effects may include peak broadening, peak distortion, peak splitting or breakthrough phenomenon. They are often found to reduce significantly the peak capacity and the peak intensity. To overcome such effects, arising specifically in online comprehensive two-dimensional liquid chromatography, different methods have been developed over the years. In this review, we focused on the most recently reported ones. A critical discussion, supported by a theoretical approach, gives an overview of their advantages and drawbacks.
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Affiliation(s)
- Soraya Chapel
- Université de Lyon, Institut des sciences analytiques, Villeurbanne, France
| | - Sabine Heinisch
- Université de Lyon, Institut des sciences analytiques, Villeurbanne, France
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[Research advances in nano liquid chromatography instrumentation]. Se Pu 2021; 39:1065-1076. [PMID: 34505428 PMCID: PMC9404240 DOI: 10.3724/sp.j.1123.2021.06017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022] Open
Abstract
小型化是液相色谱分离技术发展的重要趋势之一,包括仪器外形尺寸的小型化、分离材料粒径的小型化以及色谱柱内径的小型化。色谱柱内径的减小能够降低样品和流动相的消耗,具有更高的质量灵敏度,特别适合用于复杂样品体系的分离分析。纳升液相色谱一般是指使用内径小于100 μm的毛细管色谱柱,流速范围在每分钟几十至几百纳升的色谱技术。由于流速很低,色谱柱体积很小,柱外效应显著,因此对色谱仪器系统各个模块的性能以及系统柱外效应的优化提出了较高的要求。纳升液相色谱的输液装置需要能够准确稳定地输送纳升级流速,具有梯度输液模式,且拥有一定的耐压能力,以适应不同规格的色谱柱类型;进样装置需要能够进行准确重复的进样过程,进样体积及进样方式适合毛细管色谱柱,同时不产生明显的柱外效应;检测装置需要具有较高的灵敏度,且具有较小的柱外扩散;管路与连接系统需要稳定、可靠、易操作,并能够最大限度地减小柱外体积,适配纳升级流速。鉴于目前大多数纳升液相色谱系统与质谱检测器联用,因而本文主要从输液装置、进样装置、管路与连接3个方面对相关技术领域的研究论文、技术专利以及仪器厂商的宣传文件等进行了检索与归纳,综述了这些模块的技术路线与研究进展,同时简要介绍光学吸收型检测装置的优化思路与研究进展,并对部分商品化的纳升液相色谱系统进行了对比。
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