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Li G, Meng J, Yu S, Bai X, Dai J, Song Y, Peng X, Zhao Q. Excited-State Dynamics of a CRABPII-Based Microbial Rhodopsin Mimic. J Phys Chem B 2024; 128:7712-7721. [PMID: 38940335 DOI: 10.1021/acs.jpcb.4c01296] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/29/2024]
Abstract
Microbial rhodopsin, a pivotal photoreceptor protein, has garnered widespread application in diverse fields such as optogenetics, biotechnology, biodevices, etc. However, current microbial rhodopsins are all transmembrane proteins, which both complicates the investigation on the photoreaction mechanism and limits their further applications. Therefore, a specific mimic for microbial rhodopsin can not only provide a better model for understanding the mechanism but also can extend the applications. The human protein CRABPII turns out to be a good template for design mimics on rhodopsin due to the convenience in synthesis and the stability after mutations. Recently, Geiger et al. designed a new CRABPII-based mimic M1-L121E on microbial rhodopsin with the 13-cis, syn (13C) isomerization after irradiation. However, it still remains a question as to how similar it is compared with the natural microbial rhodopsin, in particular, in the aspect of the photoreaction dynamics. In this article, we investigate the excited-state dynamics of this mimic by measuring its transient absorption spectra. Our results reveal that there are two components in the solution of mimic M1-L121E at pH 8, known as protonated Schiff base (PSB) and unprotonated Schiff base (USB) states. In both states, the photoreaction process from 13-cis, syn(13C) to all-trans,anti (AT) is faster than that from the inverse direction. In addition, the photoreaction process in the PSB state is faster than that in the USB state. We compared the isomerization time of the PSB state to that of microbial rhodopsin. Our findings indicate that M1-L121E exhibits behaviors similar to those of microbial rhodopsins in the general pattern of PSB isomerization, where the isomerization from 13C to AT is much faster than its inverse direction. However, our results also reveal significant differences in the excited-state dynamics of the mimic relative to the native microbial rhodopsin, including the slower PSB isomerization rates as well as the unusual USB photoreaction dynamics at pH = 8. By elucidating the distinctive characteristics of mimics M1-L121E, this study enhances our understanding of microbial rhodopsin mimics and their potential applications.
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Affiliation(s)
- Gaoshang Li
- Center for Quantum Technology Research, Key Laboratory of Advanced Optoelectronic Quantum Architecture and Measurements (MOE), School of Physics, Beijing Institute of Technology, Beijing 100081, China
| | - Jiajia Meng
- Center for Quantum Technology Research, Key Laboratory of Advanced Optoelectronic Quantum Architecture and Measurements (MOE), School of Physics, Beijing Institute of Technology, Beijing 100081, China
| | - Shuang Yu
- MIIT Key Laboratory of Complex-field Intelligent Exploration, School of Optics and Photonics, Beijing Institute of Technology, Beijing 100081, China
| | - Xiaolu Bai
- MIIT Key Laboratory of Complex-field Intelligent Exploration, School of Optics and Photonics, Beijing Institute of Technology, Beijing 100081, China
| | - Jin Dai
- Center for Quantum Technology Research, Key Laboratory of Advanced Optoelectronic Quantum Architecture and Measurements (MOE), School of Physics, Beijing Institute of Technology, Beijing 100081, China
| | - Yin Song
- MIIT Key Laboratory of Complex-field Intelligent Exploration, School of Optics and Photonics, Beijing Institute of Technology, Beijing 100081, China
| | - Xubiao Peng
- Center for Quantum Technology Research, Key Laboratory of Advanced Optoelectronic Quantum Architecture and Measurements (MOE), School of Physics, Beijing Institute of Technology, Beijing 100081, China
- Beijing Academy of Quantum Information Sciences, Beijing 100081, China
| | - Qing Zhao
- Center for Quantum Technology Research, Key Laboratory of Advanced Optoelectronic Quantum Architecture and Measurements (MOE), School of Physics, Beijing Institute of Technology, Beijing 100081, China
- Beijing Academy of Quantum Information Sciences, Beijing 100081, China
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Das A, Kundu S, Gupta M, Mukherjee A. Synthesis of porous calcium-guar gum benzoate nano-biohybrids for sorptive removal of congo red and phosphates from water. Int J Biol Macromol 2023; 253:126662. [PMID: 37673147 DOI: 10.1016/j.ijbiomac.2023.126662] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2023] [Revised: 08/24/2023] [Accepted: 08/31/2023] [Indexed: 09/08/2023]
Abstract
This work aims to develop an eco-sound nano-bio-hybrid sorbent using sustainable materials for sorptive elimination of congo red and phosphates from aquatic environment. An amphipathic biopolymer derivative, high DS guar gum benzoate (GGBN) was used for entrapment of as synthesized calcium carbonate nanoparticles using solvent diffusion nano-precipitation technique. Designer nano-biohybrids were developed upon experimenting with various materials stoichiometry. SEM, XRD and EDX studies confirmed near-uniform impregnation of rhombohedral calcium carbonate crystals throughout the biopolymer matrix. Average pore size distribution and surface area of final product Ca-GGBNC, were estimated from NDLFT and BET methods respectively. Analysis of adsorption findings acquired at study temperature 27 ± 2 °C showed that the maximum adsorption capacity of Ca-GGBNC recorded qmax, 333.33 mg/g for congo red azo dye and that for phosphate was at 500 mg/g. Adsorptive removal was noted and both components followed pseudo second order kinetics. Intra-particle diffusion kinetics investigation disclosed that the boundary layer effect was prominent and the adsorption rates were not solely directed by the diffusion stage. Activation energy, Ea was to be estimated using Arrhenius equation at 56.136 and 47.015 KJ/mol for congo red and phosphates respectively. The calculated thermodynamic parameters(ΔG°, ΔH°, and ΔS°) revealed the spontaneous, feasible and endothermic sorption process. Owing to active surface area, spherical size, functional moiety and porous network, antibacterial properties of nanobiohybrid were persistent and MIC against E. coli and S. aureus were recorded at 200 μg/mL and 350 μg/mL respectively.
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Affiliation(s)
- Aatrayee Das
- Division of Pharmaceutical and Fine Chemical Technology, Department of Chemical Technology, University of Calcutta, 92, A.P.C. Road, Kolkata 700009, West Bengal, India.
| | - Sonia Kundu
- Department of Food Science and Technology, Maulana Abul Kalam Azad University of Technology, NH 12, Haringhata, Nadia 741249, West Bengal, India
| | - Mradu Gupta
- Dravyaguna Department, Institute of Post Graduate Ayurvedic Education and Research, 294/3/1, A.P.C. Road, Kolkata 700009, West Bengal, India
| | - Arup Mukherjee
- Department of Biotechnology, Maulana Abul Kalam Azad University of Technology, NH 12, Haringhata, Nadia 741249, West Bengal, India
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Lim J, Shin M, Ha T, Su WW, Yoon J, Choi JW. A Nano-Biohybrid-Based Bio-Solar Cell to Regulate the Electrical Signal Transmission to Living Cells for Biomedical Application. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2023; 35:e2303125. [PMID: 37435979 DOI: 10.1002/adma.202303125] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/04/2023] [Revised: 07/07/2023] [Accepted: 07/07/2023] [Indexed: 07/13/2023]
Abstract
Bio-solar cells are studied as sustainable and biocompatible energy sources with significant potential for biomedical applications. However, they are composed of light-harvesting biomolecules with narrow absorption wavelengths and weak transient photocurrent generation. In this study, a nano-biohybrid-based bio-solar cell composed of bacteriorhodopsin, chlorophyllin, and Ni/TiO2 nanoparticles is developed to overcome the current limitations and verify the possibility of biomedical applications. Bacteriorhodopsin and chlorophyllin are introduced as light-harvesting biomolecules to broaden the absorption wavelength. As a photocatalyst, Ni/TiO2 nanoparticles are introduced to generate a photocurrent and amplify the photocurrent generated by the biomolecules. The developed bio-solar cell absorbs a broad range of visible wavelengths and generates an amplified stationary photocurrent density (152.6 nA cm-2 ) with a long lifetime (up to 1 month). Besides, the electrophysiological signals of muscle cells at neuromuscular junctions are precisely regulated by motor neurons excited by the photocurrent of the bio-solar cell, indicating that the bio-solar cell can control living cells by signal transmission through other types of living cells. The proposed nano-biohybrid-based bio-solar cell can be used as a sustainable and biocompatible energy source for the development of wearable and implantable biodevices and bioelectronic medicines for humans.
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Affiliation(s)
- Joungpyo Lim
- Department of Chemical & Biomolecular Engineering, Sogang University, 35 Baekbeom-ro, Mapo-gu, Seoul, 04107, Republic of Korea
| | - Minkyu Shin
- Department of Chemical & Biomolecular Engineering, Sogang University, 35 Baekbeom-ro, Mapo-gu, Seoul, 04107, Republic of Korea
| | - Taehyung Ha
- Department of Chemical & Biomolecular Engineering, Sogang University, 35 Baekbeom-ro, Mapo-gu, Seoul, 04107, Republic of Korea
| | - Wei Wen Su
- Department of Molecular Biosciences and Bioengineering, University of Hawaii at Manoa, Honolulu, HI, 96822, USA
| | - Jinho Yoon
- Department of Biomedical-Chemical Engineering, The Catholic University of Korea, 43 Jibong-ro, Wonmi-gu, Bucheon-si, Gyeonggi-do, 14662, Republic of Korea
| | - Jeong-Woo Choi
- Department of Chemical & Biomolecular Engineering, Sogang University, 35 Baekbeom-ro, Mapo-gu, Seoul, 04107, Republic of Korea
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Hajareh Haghighi F, Mercurio M, Cerra S, Salamone TA, Bianymotlagh R, Palocci C, Romano Spica V, Fratoddi I. Surface modification of TiO 2 nanoparticles with organic molecules and their biological applications. J Mater Chem B 2023; 11:2334-2366. [PMID: 36847384 DOI: 10.1039/d2tb02576k] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/01/2023]
Abstract
In recent years, titanium(IV) dioxide nanoparticles (TiO2NPs) have shown promising potential in various biological applications such as antimicrobials, drug delivery, photodynamic therapy, biosensors, and tissue engineering. For employing TiO2NPs in these fields, their nanosurface must be coated or conjugated with organic and/or inorganic agents. This modification can improve their stability, photochemical properties, biocompatibility, and even surface area for further conjugation with other molecules such as drugs, targeting molecules, polymers, etc. This review describes the organic-based modification of TiO2NPs and their potential applications in the mentioned biological fields. In the first part of this review, around 75 recent publications (2017-2022) are mentioned on the common TiO2NP modifiers including organosilanes, polymers, small molecules, and hydrogels, which improve the photochemical features of TiO2NPs. In the second part of this review, we presented 149 recent papers (2020-2022) about the use of modified TiO2NPs in biological applications, in which specific bioactive modifiers are introduced in this part with their advantages. In this review, the following information is presented: (1) the common organic modifiers for TiO2NPs, (2) biologically important modifiers and their benefits, and (3) recent publications on biological studies on the modified TiO2NPs with their achievements. This review shows the paramount significance of the organic-based modification of TiO2NPs to enhance their biological effectiveness, paving the way toward the development of advanced TiO2-based nanomaterials in nanomedicine.
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Affiliation(s)
- Farid Hajareh Haghighi
- Department of Chemistry, Sapienza University of Rome, Piazzale Aldo Moro 5, 00185, Rome, Italy.
| | - Martina Mercurio
- Department of Chemistry, Sapienza University of Rome, Piazzale Aldo Moro 5, 00185, Rome, Italy.
| | - Sara Cerra
- Department of Chemistry, Sapienza University of Rome, Piazzale Aldo Moro 5, 00185, Rome, Italy.
| | | | - Roya Bianymotlagh
- Department of Chemistry, Sapienza University of Rome, Piazzale Aldo Moro 5, 00185, Rome, Italy.
| | - Cleofe Palocci
- Department of Chemistry, Sapienza University of Rome, Piazzale Aldo Moro 5, 00185, Rome, Italy. .,Research Center for Applied Sciences to the Safeguard of Environment and Cultural Heritage (CIABC), Sapienza University of Rome, Piazzale Aldo Moro 5, 00185 Rome, Italy
| | - Vincenzo Romano Spica
- Department of Movement, Health and Human Sciences, University of Rome Foro Italico, Piazza Lauro De Bosis, 15, 00135 Rome, Italy
| | - Ilaria Fratoddi
- Department of Chemistry, Sapienza University of Rome, Piazzale Aldo Moro 5, 00185, Rome, Italy.
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5
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Ding S, Zhao S, Gan X, Sun A, Xia Y, Liu Y. Design of Fluorescent Hybrid Materials Based on POSS for Sensing Applications. Molecules 2022; 27:3137. [PMID: 35630610 PMCID: PMC9146672 DOI: 10.3390/molecules27103137] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2022] [Revised: 05/11/2022] [Accepted: 05/11/2022] [Indexed: 02/05/2023] Open
Abstract
Polyhedral oligomeric silsesquioxane (POSS) has a nanoscale silicon core and eight organic functional groups on the surface, with sizes from 0.7 to 1.5 nm. The three-dimensional nanostructures of POSS can be used to build all types of hybrid materials with specific performance and controllable nanostructures. The applications of POSS-based fluorescent materials have spread across various fields. In particular, the employment of POSS-based fluorescent materials in sensing application can achieve high sensitivity, selectivity, and stability. As a result, POSS-based fluorescent materials are attracting increasing attention due to their fascinating vistas, including unique structural features, easy fabrication, and tunable optical properties by molecular design. Here, we summarize the current available POSS-based fluorescent materials from design to sensing applications. In the design section, we introduce synthetic strategies and structures of the functionalized POSS-based fluorescent materials, as well as photophysical properties. In the application section, the typical POSS-based fluorescent materials used for the detection of various target objects are summarized with selected examples to elaborate on their wide applications.
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Affiliation(s)
- Sha Ding
- Key Laboratory of Advanced Packaging Materials and Technology of Hunan Province, Hunan University of Technology, Zhuzhou 412007, China; (S.D.); (S.Z.); (X.G.); (A.S.)
| | - Shuai Zhao
- Key Laboratory of Advanced Packaging Materials and Technology of Hunan Province, Hunan University of Technology, Zhuzhou 412007, China; (S.D.); (S.Z.); (X.G.); (A.S.)
| | - Xingyue Gan
- Key Laboratory of Advanced Packaging Materials and Technology of Hunan Province, Hunan University of Technology, Zhuzhou 412007, China; (S.D.); (S.Z.); (X.G.); (A.S.)
| | - Aokui Sun
- Key Laboratory of Advanced Packaging Materials and Technology of Hunan Province, Hunan University of Technology, Zhuzhou 412007, China; (S.D.); (S.Z.); (X.G.); (A.S.)
| | - Yong Xia
- Key Laboratory of Advanced Packaging Materials and Technology of Hunan Province, Hunan University of Technology, Zhuzhou 412007, China; (S.D.); (S.Z.); (X.G.); (A.S.)
- College of Chemistry and Chemical Engineering, Central South University, Changsha 410083, China
| | - Yuejun Liu
- Key Laboratory of Advanced Packaging Materials and Technology of Hunan Province, Hunan University of Technology, Zhuzhou 412007, China; (S.D.); (S.Z.); (X.G.); (A.S.)
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Li J, Xin M, Ma Z, Shi Y, Pan L. Nanomaterials and their applications on bio-inspired wearable electronics. NANOTECHNOLOGY 2021; 32:472002. [PMID: 33592596 DOI: 10.1088/1361-6528/abe6c7] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2020] [Accepted: 02/16/2021] [Indexed: 06/12/2023]
Abstract
Wearable electronics featuring conformal attachment, sensitive perception and intellectual signal processing have made significant progress in recent years. However, when compared with living organisms, artificial sensory devices showed undeniable bulky shape, poor adaptability, and large energy consumption. To make up for the deficiencies, biological examples provide inspirations of novel designs and practical applications. In the field of biomimetics, nanomaterials from nanoparticles to layered two-dimensional materials are actively involved due to their outstanding physicochemical properties and nanoscale configurability. This review focuses on nanomaterials related to wearable electronics through bioinspired approaches on three different levels, interfacial packaging, sensory structure, and signal processing, which comprehensively guided recent progress of wearable devices in leveraging both nanomaterial superiorities and biorealistic functionalities. In addition, opinions on potential development trend are proposed aiming at implementing bioinspired electronics in multifunctional portable sensors, health monitoring, and intelligent prosthetics.
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Affiliation(s)
- Jiean Li
- Collaborative Innovation Center of Advanced Microstructures, School of Electronic Science and Engineering, Nanjing University, Nanjing 210093, People's Republic of China
| | - Ming Xin
- Collaborative Innovation Center of Advanced Microstructures, School of Electronic Science and Engineering, Nanjing University, Nanjing 210093, People's Republic of China
| | - Zhong Ma
- Collaborative Innovation Center of Advanced Microstructures, School of Electronic Science and Engineering, Nanjing University, Nanjing 210093, People's Republic of China
| | - Yi Shi
- Collaborative Innovation Center of Advanced Microstructures, School of Electronic Science and Engineering, Nanjing University, Nanjing 210093, People's Republic of China
| | - Lijia Pan
- Collaborative Innovation Center of Advanced Microstructures, School of Electronic Science and Engineering, Nanjing University, Nanjing 210093, People's Republic of China
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7
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Incorporation of Membrane Proteins Into Bicontinuous Microemulsions Through
Winsor‐III System‐Based
Extraction. J SURFACTANTS DETERG 2021. [DOI: 10.1002/jsde.12500] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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Abstract
The biological process of photosynthesis was critical in catalyzing the oxygenation of Earth’s atmosphere 2.5 billion years ago, changing the course of development of life on Earth. Recently, the fields of applied and synthetic photosynthesis have utilized the light-driven protein–pigment supercomplexes central to photosynthesis for the photocatalytic production of fuel and other various valuable products. The reaction center Photosystem I is of particular interest in applied photosynthesis due to its high stability post-purification, non-geopolitical limitation, and its ability to generate the greatest reducing power found in nature. These remarkable properties have been harnessed for the photocatalytic production of a number of valuable products in the applied photosynthesis research field. These primarily include photocurrents and molecular hydrogen as fuels. The use of artificial reaction centers to generate substrates and reducing equivalents to drive non-photoactive enzymes for valuable product generation has been a long-standing area of interest in the synthetic photosynthesis research field. In this review, we cover advances in these areas and further speculate synthetic and applied photosynthesis as photocatalysts for the generation of valuable products.
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Jafari S, Mahyad B, Hashemzadeh H, Janfaza S, Gholikhani T, Tayebi L. Biomedical Applications of TiO 2 Nanostructures: Recent Advances. Int J Nanomedicine 2020; 15:3447-3470. [PMID: 32523343 PMCID: PMC7234979 DOI: 10.2147/ijn.s249441] [Citation(s) in RCA: 111] [Impact Index Per Article: 27.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2020] [Accepted: 04/16/2020] [Indexed: 12/13/2022] Open
Abstract
Titanium dioxide (TiO2) nanostructures are one of the most plentiful compounds that have emerged in various fields of technology such as medicine, energy and biosensing. Various TiO2 nanostructures (nanotubes [NTs] and nanowires) have been employed in photoelectrochemical (PEC) biosensing applications, greatly enhancing the detection of targets. TiO2 nanostructures, used as reinforced material or coatings for the bare surface of titanium implants, are excellent additive materials to compensate titanium implants deficiencies-like poor surface interaction with surrounding tissues-by providing nanoporous surfaces and hierarchical structures. These nanostructures can also be loaded by diversified drugs-like osteoporosis drugs, anticancer and antibiotics-and used as local drug delivery systems. Furthermore, TiO2 nanostructures and their derivatives are new emerging antimicrobial agents to overcome human pathogenic microorganisms. However, like all other nanomaterials, toxicity and biocompatibility of TiO2 nanostructures must be considered. This review highlights recent advances, along with the properties and numerous applications of TiO2-based nanostructure compounds in nano biosensing, medical implants, drug delivery and antibacterial fields. Moreover, in the present study, some recent advances accomplished on the pharmaceutical applications of TiO2 nanostructures, as well as its toxicity and biocompatibility, are presented.
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Affiliation(s)
- Sevda Jafari
- Biotechnology Research Center, Tabriz University of Medical Sciences, Tabriz, Islamic Republic of Iran
- Student Research Committee, Faculty of Pharmacy, Tabriz University of Medical Sciences, Tabriz, Islamic Republic of Iran
| | - Baharak Mahyad
- Department of Life Science Engineering, Faculty of New Science and Technologies, University of Tehran, Tehran, Islamic Republic of Iran
| | - Hadi Hashemzadeh
- Department of Nanobiotechnology, Tarbiat Modares University, Tehran, 14117, Islamic Republic of Iran
| | - Sajjad Janfaza
- Department of Nanobiotechnology, Tarbiat Modares University, Tehran, 14117, Islamic Republic of Iran
| | - Tooba Gholikhani
- Student Research Committee, Faculty of Pharmacy, Tabriz University of Medical Sciences, Tabriz, Islamic Republic of Iran
| | - Lobat Tayebi
- Marquette University School of Dentistry, Milwaukee, WI53233, USA
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Oleinikov VA, Solovyeva DO, Zaitsev SY. Nanohybrid Structures Based on Plasmonic or Fluorescent Nanoparticles and Retinal-Containing Proteins. BIOCHEMISTRY (MOSCOW) 2020; 85:S196-S212. [PMID: 32087060 DOI: 10.1134/s0006297920140102] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Rhodopsins are light-sensitive membrane proteins enabling transmembrane charge separation (proton pump) on absorption of a light quantum. Bacteriorhodopsin (BR) is a transmembrane protein from halophilic bacteria that belongs to the rhodopsin family. Potential applications of BR are considered so promising that the number of studies devoted to the use of BR itself, its mutant variants, as well as hybrid materials containing BR in various areas grows steadily. Formation of hybrid structures combining BR with nanoparticles is an essential step in promotion of BR-based devices. However, rapid progress, continuous emergence of new data, as well as challenges of analyzing the entire data require regular reviews of the achievements in this area. This review is devoted to the issues of formation of materials based on hybrids of BR with fluorescent semiconductor nanocrystals (quantum dots) and with noble metal (silver, gold) plasmonic nanoparticles. Recent data on formation of thin (mono-) and thick (multi-) layers from materials containing BR and BR/nanoparticle hybrids are presented.
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Affiliation(s)
- V A Oleinikov
- Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow, 117997, Russia. .,Institute of Engineering Physics for Biomedicine, National Research Nuclear University MEPhI, Moscow, 115409, Russia
| | - D O Solovyeva
- Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow, 117997, Russia.,Institute of Engineering Physics for Biomedicine, National Research Nuclear University MEPhI, Moscow, 115409, Russia
| | - S Yu Zaitsev
- Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow, 117997, Russia.,L. K. Ernst Federal Science Center for Animal Husbandry, Dubrovitsy, Moscow Region, 142132, Russia
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11
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Investigation of spectral and kinetic properties of polymer films based on some analogs of bacteriorhodopsin. EUROPEAN BIOPHYSICS JOURNAL: EBJ 2019; 48:749-756. [PMID: 31642958 DOI: 10.1007/s00249-019-01401-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/07/2019] [Revised: 09/26/2019] [Accepted: 10/03/2019] [Indexed: 10/25/2022]
Abstract
We investigated the characteristics of modified forms of bacteriorhodopsin in which the native retinal chromophore is replaced by a chemical analog ("bacteriorhodopsin analogs"), embedded in a polymer film. We found they displayed differential absorption spectra and kinetic curves for the most long-lived intermediates of the BR photocycle. We also studied the influence of chemical reagents on the functioning of bacteriorhodopsin analogs in polymeric films. We found that the immobilization of BR analogs in polymer leads, as in the case of native BR, to a slowing down of their photocycles. Kinetic analysis showed that M-like state intermediates of all the BR analogs have a longer dark relaxation time than native BR. The retention and retardation of the photocycle in these films suggest that films based on BR analogs can be used as photochromic materials. Moreover, 4-keto BR seems to be more promising for this application as compared not only with native BR, but also with other analogs of BR studied in this work.
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12
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Investigation of factors influencing oxygen content in Halobacterium salinarum growth medium for improved bacteriorhodopsin production. INTERNATIONAL JOURNAL OF INDUSTRIAL CHEMISTRY 2019. [DOI: 10.1007/s40090-019-0189-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
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13
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Yoon J, Lee T, Choi JW. Development of Bioelectronic Devices Using Bionanohybrid Materials for Biocomputation System. MICROMACHINES 2019; 10:mi10050347. [PMID: 31137779 PMCID: PMC6562802 DOI: 10.3390/mi10050347] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/17/2019] [Revised: 05/16/2019] [Accepted: 05/22/2019] [Indexed: 02/07/2023]
Abstract
Bioelectronic devices have been researched widely because of their potential applications, such as information storage devices, biosensors, diagnosis systems, organism-mimicking processing system cell chips, and neural-mimicking systems. Introducing biomolecules including proteins, DNA, and RNA on silicon-based substrates has shown the powerful potential for granting various functional properties to chips, including specific functional electronic properties. Until now, to extend and improve their properties and performance, organic and inorganic materials such as graphene and gold nanoparticles have been combined with biomolecules. In particular, bionanohybrid materials that are composed of biomolecules and other materials have been researched because they can perform core roles of information storage and signal processing in bioelectronic devices using the unique properties derived from biomolecules. This review discusses bioelectronic devices related to computation systems such as biomemory, biologic gates, and bioprocessors based on bionanohybrid materials with a selective overview of recent research. This review contains a new direction for the development of bioelectronic devices to develop biocomputation systems using biomolecules in the future.
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Affiliation(s)
- Jinho Yoon
- Department of Chemical & Biomolecular Engineering, Sogang University, 35 Baekbeom-Ro, Mapo-Gu, Seoul 04107, Korea.
| | - Taek Lee
- Department of Chemical Engineering, Kwangwoon University, Wolgye-dong, Nowon-gu, Seoul 01899, Korea.
| | - Jeong-Woo Choi
- Department of Chemical & Biomolecular Engineering, Sogang University, 35 Baekbeom-Ro, Mapo-Gu, Seoul 04107, Korea.
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14
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Luchini A, Vitiello G. Understanding the Nano-bio Interfaces: Lipid-Coatings for Inorganic Nanoparticles as Promising Strategy for Biomedical Applications. Front Chem 2019; 7:343. [PMID: 31165058 PMCID: PMC6534186 DOI: 10.3389/fchem.2019.00343] [Citation(s) in RCA: 69] [Impact Index Per Article: 13.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2018] [Accepted: 04/25/2019] [Indexed: 12/26/2022] Open
Abstract
Inorganic nanoparticles (NPs) exhibit relevant physical properties for application in biomedicine and specifically for both the diagnosis and therapy (i.e. theranostic) of severe pathologies, such as cancer. The inorganic NP core is often not stable in aqueous suspension and can induce cytotoxic effects. For this reason, over the years, several coating strategies were suggested to improve the NP stability in aqueous solutions as well as the NP biocompatibility. Among the various components which can be used for NP coatings, lipids, and in particular phospholipids emerged as versatile molecular building blocks for the production of NP coatings suitable for biomedical application. The recent synthetic efforts in NP lipid coatings allows today to introduce on the NP surface a large variety of lipid molecules eventually in mixture with amphiphilic or hydrophobic drugs or active molecules for cell targeting. In this review, the most relevant examples of NP lipid-coatings are presented and grouped in two main categories: supported lipid bilayers (SLB) and hybrid lipid bilayers (HLB). The discussed scientific cases take into account the most commonly used inorganic NP for biomedical applications in cancer therapy and diagnosis.
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Affiliation(s)
| | - Giuseppe Vitiello
- Department of Chemical, Materials and Production Engineering, University of Naples Federico II, Naples, Italy
- CSGI, Center for Colloids and Surface Science, Sesto Fiorentino, Italy
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Panzer S, Brych A, Batschauer A, Terpitz U. Opsin 1 and Opsin 2 of the Corn Smut Fungus Ustilago maydis Are Green Light-Driven Proton Pumps. Front Microbiol 2019; 10:735. [PMID: 31024506 PMCID: PMC6467936 DOI: 10.3389/fmicb.2019.00735] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2018] [Accepted: 03/25/2019] [Indexed: 01/19/2023] Open
Abstract
In fungi, green light is absorbed by rhodopsins, opsin proteins carrying a retinal molecule as chromophore. The basidiomycete Ustilago maydis, a fungal pathogen that infects corn plants, encodes three putative photoactive opsins, called ops1 (UMAG_02629), ops2 (UMAG_00371), and ops3 (UMAG_04125). UmOps1 and UmOps2 are expressed during the whole life cycle, in axenic cultures as well as in planta, whereas UmOps3 was recently shown to be absent in axenic cultures but highly expressed during plant infection. Here we show that expression of UmOps1 and UmOps2 is induced by blue light under control of white collar 1 (Wco1). UmOps1 is mainly localized in the plasma membrane, both when expressed in HEK cells and U. maydis sporidia. In contrast, UmOps2 was mostly found intracellularly in the membranes of vacuoles. Patch-clamp studies demonstrated that both rhodopsins are green light-driven outward rectifying proton pumps. UmOps1 revealed an extraordinary pH dependency with increased activity in more acidic environment. Also, UmOps1 showed a pronounced, concentration-dependent enhancement of pump current caused by weak organic acids (WOAs), especially by acetic acid and indole-3-acetic acid (IAA). In contrast, UmOps2 showed the typical behavior of light-driven, outwardly directed proton pumps, whereas UmOps3 did not exhibit any electrogenity. With this work, insights were gained into the localization and molecular function of two U. maydis rhodopsins, paving the way for further studies on the biological role of these rhodopsins in the life cycle of U. maydis.
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Affiliation(s)
- Sabine Panzer
- Theodor-Boveri-Institute, Department of Biotechnology and Biophysics, Biocenter, Julius Maximilian University, Würzburg, Germany
| | - Annika Brych
- Department of Plant Physiology and Photobiology, Faculty of Biology, Philipps University, Marburg, Germany
| | - Alfred Batschauer
- Department of Plant Physiology and Photobiology, Faculty of Biology, Philipps University, Marburg, Germany
| | - Ulrich Terpitz
- Theodor-Boveri-Institute, Department of Biotechnology and Biophysics, Biocenter, Julius Maximilian University, Würzburg, Germany
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16
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Srivastava SK, Piwek P, Ayakar SR, Bonakdarpour A, Wilkinson DP, Yadav VG. A Biogenic Photovoltaic Material. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2018; 14:e1800729. [PMID: 29855136 DOI: 10.1002/smll.201800729] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/22/2018] [Revised: 04/05/2018] [Indexed: 06/08/2023]
Abstract
A proof-of-concept for the fabrication of genetically customizable biogenic materials for photovoltaic applications is presented. E. coli is first genetically engineered to heterologously express the carotenoid biosynthetic pathway from plants. This modification yields a strain that overproduces the photoactive pigment lycopene. The pigment-producing cells are then coated with TiO2 nanoparticles via a tryptophan-mediated supramolecular interface, and subsequent incorporation of the resulting biogenic material (cells@TiO2 ) as an anode in an I- /I3- -based dye-sensitized solar cell yields an excellent photovoltaic (PV) response. This work lays strong foundations for the development of bio-PV materials and next-generation organic optoelectronics that are green, inexpensive, and easy to manufacture.
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Affiliation(s)
- Sarvesh Kumar Srivastava
- Department of Chemical and Biological Engineering, The University of British Columbia, 2360 East Mall, Vancouver, BC, V6T 1Z3, Canada
| | - Przemyslaw Piwek
- Department of Chemical and Biological Engineering, The University of British Columbia, 2360 East Mall, Vancouver, BC, V6T 1Z3, Canada
| | - Sonal R Ayakar
- Department of Chemical and Biological Engineering, The University of British Columbia, 2360 East Mall, Vancouver, BC, V6T 1Z3, Canada
| | - Arman Bonakdarpour
- Department of Chemical and Biological Engineering, The University of British Columbia, 2360 East Mall, Vancouver, BC, V6T 1Z3, Canada
- Clean Energy Research Centre, The University of British Columbia, 2360 East Mall, Vancouver, BC, V6T 1Z3, Canada
| | - David P Wilkinson
- Department of Chemical and Biological Engineering, The University of British Columbia, 2360 East Mall, Vancouver, BC, V6T 1Z3, Canada
- Clean Energy Research Centre, The University of British Columbia, 2360 East Mall, Vancouver, BC, V6T 1Z3, Canada
| | - Vikramaditya G Yadav
- Department of Chemical and Biological Engineering, The University of British Columbia, 2360 East Mall, Vancouver, BC, V6T 1Z3, Canada
- School of Biomedical Engineering, The University of British Columbia, 2360 East Mall, Vancouver, BC, V6T 1Z3, Canada
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17
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Ji L, Ma B, Meng Q, Li L, Liu K, Chen D. Detergent-resistant oligomeric Leptosphaeria rhodopsin is a promising bio-nanomaterial and an alternative to bacteriorhodopsin. Biochem Biophys Res Commun 2017; 493:352-357. [PMID: 28887035 DOI: 10.1016/j.bbrc.2017.09.018] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2017] [Accepted: 09/05/2017] [Indexed: 01/10/2023]
Abstract
Bacteriorhodopsin has attracted remarkable attention as a photoactive bio-nanomaterial in the last decades. However, its instability in the presence of detergents has restricted the extent to which bacteriorhodopsin may be applied. In this study, we investigated the oligomerization of a eukaryotic light-driven H+-pump, Leptosphaeria rhodopsin, using circular dichroism spectroscopy and other biophysical and biochemical methods. Our findings revealed that Leptosphaeria rhodopsin assembled into oligomers in the cell membrane and also in 0.05% DDM detergent micelles. Moreover, unlike bacteriorhodopsin in purple membrane, Leptosphaeria rhodopsin retained its oligomeric structure in 1% Triton X-100 and demonstrated strong resistance to other common detergents. A maximal photocurrent density of ∼85 nA/cm2 was consistently generated, which was substantially larger than that of solubilized bacteriorhodopsin (∼10 nA/cm2). Therefore, oligomeric Leptosphaeria rhodopsin may be a promising bio-nanomaterial, and an alternative to bacteriorhodopsin, especially with the use of detergents.
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Affiliation(s)
- Liangliang Ji
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Baofu Ma
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Qian Meng
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Longjie Li
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Ke Liu
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Deliang Chen
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China.
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18
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Druzhko AB, Dyukova TV, Pirutin SK. Some factors affecting the process of photoinduced hydroxylaminolysis in different bacteriorhodopsin-based media. EUROPEAN BIOPHYSICS JOURNAL : EBJ 2017; 46:509-515. [PMID: 28474199 DOI: 10.1007/s00249-017-1211-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2016] [Revised: 02/22/2017] [Accepted: 04/13/2017] [Indexed: 11/25/2022]
Abstract
This review presents the results of studies concerning some factors that affect the process of photoinduced hydroxylaminolysis (PHA) in bacteriorhodopsin (BR) and different BR-based media. We consider the peculiar properties of the PHA reaction in water suspensions of BR and BR-based media depending on variation in PHA ingredients, and in particular the use of O-substituted hydroxylamines instead of hydroxylamine hydrochloride. In addition, we discuss how such factors as preliminary ultra-sonication affect the reaction of PHA in the course of BR bleaching and following the reconstitution of bacterioopsin. All the results are considered from the viewpoint of improving the performance of BR-based media as photosensitive materials for the processing and storage of optical information.
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Affiliation(s)
- Anna B Druzhko
- Institute of Theoretical and Experimental Biophysics, Russian Academy of Sciences, Institutskaya ul. 3, Pushchino, Moscow region, 142290, Russia.
| | - Tatyana V Dyukova
- Institute of Theoretical and Experimental Biophysics, Russian Academy of Sciences, Institutskaya ul. 3, Pushchino, Moscow region, 142290, Russia
| | - Sergey K Pirutin
- Institute of Theoretical and Experimental Biophysics, Russian Academy of Sciences, Institutskaya ul. 3, Pushchino, Moscow region, 142290, Russia.,Biophysical Department, Biology Faculty, Lomonosov Moscow State University, Moscow, Russia
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19
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Prasad M, Sharma V, Mayabadi A, Rokade A, Pawbake A, Rondiya S, Waykar R, Jadhavar A, Pathan H, Jadkar S. Chlorophyll-a/ZnO Nanorod Based Hybrid Photoanodes for Enhanced Photoelectrochemical Splitting of Water. ChemistrySelect 2017. [DOI: 10.1002/slct.201601814] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Mohit Prasad
- Department of Physics; Savitribai Phule Pune University; Pune 411007 India
| | - Vidhika Sharma
- Department of Physics; Savitribai Phule Pune University; Pune 411007 India
| | - Azam Mayabadi
- Department of Energy Engineering and Physics; Amirkabir University of Technology; Tehran Iran
| | - Avinash Rokade
- Department of Physics; Savitribai Phule Pune University; Pune 411007 India
| | - Amit Pawbake
- Department of Physics; Savitribai Phule Pune University; Pune 411007 India
| | - Sachin Rondiya
- Department of Physics; Savitribai Phule Pune University; Pune 411007 India
| | - Ravindra Waykar
- Department of Physics; Savitribai Phule Pune University; Pune 411007 India
| | - Ashok Jadhavar
- Department of Physics; Savitribai Phule Pune University; Pune 411007 India
| | - Habib Pathan
- Department of Physics; Savitribai Phule Pune University; Pune 411007 India
| | - Sandesh Jadkar
- Department of Physics; Savitribai Phule Pune University; Pune 411007 India
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20
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Lu Z, Wang J, Li R, Qiao Y, Zhou M, Li CM. Controllable stationary photocurrents generated from a bacteriorhodopsin/upconversion nanoparticle-based bionanosystem under NIR illumination. NANOSCALE 2016; 8:18524-18530. [PMID: 27782261 DOI: 10.1039/c6nr06930d] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
In the past few decades, tremendous effort has been dedicated to develop bacteriorhodopsin (bR)-based photo-electronic devices for generating a stationary photocurrent and further for use as a component of artificial retinas in constant illumination sensing. However, an IR-triggered stationary photocurrent with controllable amplitudes has never been realized to date. Herein, NaYF4:Yb,Er and NaYF4:Yb,Tm upconversion nanoparticles (UCNPs) with green and blue emissions, respectively, were synthesized and further incorporated with bR to build a bionanosystem. Under 980 nm NIR irradiation the UCNPs function as internal green and blue light sources to initiate the photocycle and speed up the transition of bR from M410 to the ground state, consequently accelerating the bR photocycle for the generation of a stationary photocurrent. Moreover, the photocurrent profile could be tailored by changing the blue/green emission intensity ratio. The mechanism is analysed to explore the scientific insights. The system consisting of controllable blue and green light sources may not only hold great promise to construct new types of bR-based optical devices, but also offers a useful setup to investigate the fundamental science underlying the bR photoresponse.
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Affiliation(s)
- Zhisong Lu
- Institute for Clean Energy & Advance Materials, Southwest University, 1 Tiansheng Road, Chongqing 400715, P. R. China and Chongqing Key Laboratory for Advanced Materials & Technologies of Clean Energies, Southwest University, 1 Tiansheng Road, Chongqing 400715, P. R. China.
| | - Jing Wang
- Institute for Clean Energy & Advance Materials, Southwest University, 1 Tiansheng Road, Chongqing 400715, P. R. China and Chongqing Key Laboratory for Advanced Materials & Technologies of Clean Energies, Southwest University, 1 Tiansheng Road, Chongqing 400715, P. R. China.
| | - Rui Li
- Hubei Key Laboratory of Genetic Regulation and Integrative Biology, School of Life Sciences, Central China Normal University, Wuhan 430079, P. R. China
| | - Yan Qiao
- Institute for Clean Energy & Advance Materials, Southwest University, 1 Tiansheng Road, Chongqing 400715, P. R. China and Chongqing Key Laboratory for Advanced Materials & Technologies of Clean Energies, Southwest University, 1 Tiansheng Road, Chongqing 400715, P. R. China.
| | - Mengyao Zhou
- Institute for Clean Energy & Advance Materials, Southwest University, 1 Tiansheng Road, Chongqing 400715, P. R. China and Chongqing Key Laboratory for Advanced Materials & Technologies of Clean Energies, Southwest University, 1 Tiansheng Road, Chongqing 400715, P. R. China.
| | - Chang Ming Li
- Institute for Clean Energy & Advance Materials, Southwest University, 1 Tiansheng Road, Chongqing 400715, P. R. China and Chongqing Key Laboratory for Advanced Materials & Technologies of Clean Energies, Southwest University, 1 Tiansheng Road, Chongqing 400715, P. R. China. and Institute for Materials Science and Devices, Suzhou University of Science and Technology, Suzhou 215011, P.R. China
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