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Yassin MM, Lu J, Zaman A, Yang H, Cao A, Zeng X, Hassan H, Han T, Miao X, Shi Y, Guo Y, Luo Y, Kang Y. Advancing ischemic stroke diagnosis and clinical outcome prediction using improved ensemble techniques in DSC-PWI radiomics. Sci Rep 2024; 14:27580. [PMID: 39528656 PMCID: PMC11555321 DOI: 10.1038/s41598-024-78353-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2024] [Accepted: 10/30/2024] [Indexed: 11/16/2024] Open
Abstract
Ischemic stroke is a leading global cause of death and disability and is expected to rise in the future. The present diagnostic techniques, like CT and MRI, have some limitations in distinguishing acute from chronic ischemia and in early ischemia detection. This study investigates the function of ensemble models based on the dynamic radiomics features (DRF) from the dynamic susceptibility contrast perfusion-weighted imaging (DSC-PWI) ischemic stroke diagnosis, neurological impairment assessment, and modified Rankin Scale (mRS) outcome prediction). DRF is extracted from the 3D images, features are selected, and dimensionality is reduced. After that, ensemble models are applied. Two model structures were developed: a voting classifier with 6 bagging classifiers and a stacking classifier based on 4 bagging classifiers. The ensemble models were evaluated on three core tasks. The Stacking_ens_LR model performed best for ischemic stroke detection, the LR Bagging model for NIH Stroke Scale (NIHSS) prediction, and the NB Bagging model for outcome prediction. These outcomes illustrate the strength of ensemble models. The work showcases the role of ensemble models and DRF in the stroke management process.
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Affiliation(s)
- Mazen M Yassin
- School of Biomedical Engineering, Shenzhen University Medical School, Shenzhen University, Shenzhen, 518055, China
- College of Health Science and Environmental Engineering, Shenzhen Technology University, Shenzhen, 518118, China
- Biomedical Engineering Department, Faculty of Engineering, Minia University, Menia, 61111, Egypt
| | - Jiaxi Lu
- College of Health Science and Environmental Engineering, Shenzhen Technology University, Shenzhen, 518118, China
- School of Applied Technology, Shenzhen University, Shenzhen, 518055, China
| | - Asim Zaman
- School of Biomedical Engineering, Shenzhen University Medical School, Shenzhen University, Shenzhen, 518055, China
- College of Health Science and Environmental Engineering, Shenzhen Technology University, Shenzhen, 518118, China
- School of Applied Technology, Shenzhen University, Shenzhen, 518055, China
| | - Huihui Yang
- College of Health Science and Environmental Engineering, Shenzhen Technology University, Shenzhen, 518118, China
- School of Applied Technology, Shenzhen University, Shenzhen, 518055, China
| | - Anbo Cao
- College of Health Science and Environmental Engineering, Shenzhen Technology University, Shenzhen, 518118, China
- School of Applied Technology, Shenzhen University, Shenzhen, 518055, China
| | - Xueqiang Zeng
- College of Health Science and Environmental Engineering, Shenzhen Technology University, Shenzhen, 518118, China
- School of Applied Technology, Shenzhen University, Shenzhen, 518055, China
| | - Haseeb Hassan
- College of Health Science and Environmental Engineering, Shenzhen Technology University, Shenzhen, 518118, China
| | - Taiyu Han
- College of Health Science and Environmental Engineering, Shenzhen Technology University, Shenzhen, 518118, China
- School of Applied Technology, Shenzhen University, Shenzhen, 518055, China
| | - Xiaoqiang Miao
- College of Health Science and Environmental Engineering, Shenzhen Technology University, Shenzhen, 518118, China
- College of Medicine and Biological Information Engineering, Northeastern University, Shenyang, 110169, China
| | - Yongkang Shi
- College of Health Science and Environmental Engineering, Shenzhen Technology University, Shenzhen, 518118, China
- School of Applied Technology, Shenzhen University, Shenzhen, 518055, China
| | - Yingwei Guo
- School of Electrical and Information Engineering, Northeast Petroleum University, Daqing, 163318, China
| | - Yu Luo
- Department of Radiology, Shanghai Fourth People's Hospital Affiliated to Tongji University School of Medicine, Shanghai, 200434, China
| | - Yan Kang
- School of Biomedical Engineering, Shenzhen University Medical School, Shenzhen University, Shenzhen, 518055, China.
- College of Health Science and Environmental Engineering, Shenzhen Technology University, Shenzhen, 518118, China.
- College of Medicine and Biological Information Engineering, Northeastern University, Shenyang, 110169, China.
- Faculty of Data Science, City University of Macau, Macau, China.
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Fan Z, Gao A, Zhang J, Meng X, Yin Q, Shen Y, Hu R, Gao S, Yang H, Xu Y, Liang H. Study of prediction model for high-grade meningioma using fractal geometry combined with radiological features. J Neurooncol 2024:10.1007/s11060-024-04867-0. [PMID: 39497017 DOI: 10.1007/s11060-024-04867-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2024] [Accepted: 10/25/2024] [Indexed: 11/06/2024]
Abstract
PURPOSE To establish a prediction model combining fractal geometry and radiological features, which consider the complexity of tumour morphology advancing beyond the limitations of previous models. METHODS A total of 227 patients at the First Affiliated Hospital of Harbin Medical University from July 2021 to November 2023 were included. Fractal geometry was calculated and the radiomics features were extracted from regions of interest (ROIs). Weighted Gene Co-Expression Network Analysis (WGCNA) was employed for preliminary screening to identify those that were significantly associated with high-grade meningioma. In the training cohort, the least absolute shrinkage and selection operator (LASSO) regression was employed for further screening the radiomics features. Area under curve (AUC) was to evaluate models' performance. RESULTS In entire patient cohort, low-grade meningiomas had significantly lower fractal dimensions (P = 0.01), while high-grade meningiomas had higher lacunarity (P = 0.049). Fractal dimension (OR 6.8, 95% CI 1.49-36.51, P = 0.017), lacunarity (OR 3.7, 95% CI 1.36-11.75, P = 0.014), and Rscore (OR 2.8, 95% CI 1.55-5.75, P = 0.002) were independent risk factors for high-grade meningiomas. The final results demonstrated that the "fractal geometry + radiological features (semantic features + radiomics features)" model exhibited the most optimal performance in predicting high-grade meningioma, with an AUC of 0.854 in the training cohort and 0.757 in the validation cohort. CONCLUSION Significant differences in fractal dimension and lacunarity exist between high-grade and low-grade meningiomas, which can be potential predictive factors. The developed predictive model demonstrated good performance in predicting high-grade meningiomas.
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Affiliation(s)
- Zhaoxin Fan
- Department of Neurosurgery, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang Province, China
- NHC Key Laboratory of Cell Transplantation, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang Province, China
| | - Aili Gao
- School of Life Science, Northeast Agricultural University, Harbin, Heilongjiang Province, China
| | - Jie Zhang
- Department of Neurosurgery, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang Province, China
- NHC Key Laboratory of Cell Transplantation, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang Province, China
| | - Xiangyi Meng
- Department of Neurosurgery, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang Province, China
- NHC Key Laboratory of Cell Transplantation, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang Province, China
| | - Qunxin Yin
- Eye Hospital, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang Province, China
| | - Yongze Shen
- Department of Neurosurgery, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang Province, China
- NHC Key Laboratory of Cell Transplantation, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang Province, China
| | - Renjie Hu
- Department of Neurosurgery, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang Province, China
- NHC Key Laboratory of Cell Transplantation, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang Province, China
| | - Shang Gao
- Department of Neurosurgery, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang Province, China
- NHC Key Laboratory of Cell Transplantation, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang Province, China
| | - Hongge Yang
- Department of Neurosurgery, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang Province, China
- NHC Key Laboratory of Cell Transplantation, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang Province, China
| | - Yingqi Xu
- College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, Heilongjiang Province, China.
| | - Hongsheng Liang
- Department of Neurosurgery, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang Province, China.
- NHC Key Laboratory of Cell Transplantation, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang Province, China.
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Lim JS, Au Yong TPT, Boon CS, Boon IS. Radiomics in Oncology and Radiology: Statistical Significance Versus Clinical Significance. Clin Oncol (R Coll Radiol) 2024; 36:e342. [PMID: 38777705 DOI: 10.1016/j.clon.2024.05.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2024] [Accepted: 05/03/2024] [Indexed: 05/25/2024]
Affiliation(s)
- J S Lim
- School of Medicine, University of Southampton, Southampton, UK
| | - T P T Au Yong
- Department of Radiology, The Royal Wolverhampton NHS Trust, Wolverhampton, UK
| | - C S Boon
- Department of Clinical Oncology, Raigmore Hospital, Inverness, Scotland, UK
| | - I S Boon
- Department of Clinical Oncology, University Hospital Southampton NHS Foundation Trust, Southampton, UK; Clinical and Experimental Sciences, Faculty of Medicine, University of Southampton, Southampton, UK
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