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Al-masni MA, Al-Shamiri AK, Hussain D, Gu YH. A Unified Multi-Task Learning Model with Joint Reverse Optimization for Simultaneous Skin Lesion Segmentation and Diagnosis. Bioengineering (Basel) 2024; 11:1173. [PMID: 39593832 PMCID: PMC11592164 DOI: 10.3390/bioengineering11111173] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2024] [Revised: 11/17/2024] [Accepted: 11/19/2024] [Indexed: 11/28/2024] Open
Abstract
Classifying and segmenting skin cancer represent pivotal objectives for automated diagnostic systems that utilize dermoscopy images. However, these tasks present significant challenges due to the diverse shape variations of skin lesions and the inherently fuzzy nature of dermoscopy images, including low contrast and the presence of artifacts. Given the robust correlation between the classification of skin lesions and their segmentation, we propose that employing a combined learning method holds the promise of considerably enhancing the performance of both tasks. In this paper, we present a unified multi-task learning strategy that concurrently classifies abnormalities of skin lesions and allows for the joint segmentation of lesion boundaries. This approach integrates an optimization technique known as joint reverse learning, which fosters mutual enhancement through extracting shared features and limiting task dominance across the two tasks. The effectiveness of the proposed method was assessed using two publicly available datasets, ISIC 2016 and PH2, which included melanoma and benign skin cancers. In contrast to the single-task learning strategy, which solely focuses on either classification or segmentation, the experimental findings demonstrated that the proposed network improves the diagnostic capability of skin tumor screening and analysis. The proposed method achieves a significant segmentation performance on skin lesion boundaries, with Dice Similarity Coefficients (DSC) of 89.48% and 88.81% on the ISIC 2016 and PH2 datasets, respectively. Additionally, our multi-task learning approach enhances classification, increasing the F1 score from 78.26% (baseline ResNet50) to 82.07% on ISIC 2016 and from 82.38% to 85.50% on PH2. This work showcases its potential applicability across varied clinical scenarios.
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Affiliation(s)
- Mohammed A. Al-masni
- Department of Artificial Intelligence and Data Science, College of AI Convergence, Sejong University, Seoul 05006, Republic of Korea; (M.A.A.-m.); (D.H.)
| | - Abobakr Khalil Al-Shamiri
- School of Computer Science, University of Southampton Malaysia, Iskandar Puteri 79100, Johor, Malaysia
| | - Dildar Hussain
- Department of Artificial Intelligence and Data Science, College of AI Convergence, Sejong University, Seoul 05006, Republic of Korea; (M.A.A.-m.); (D.H.)
| | - Yeong Hyeon Gu
- Department of Artificial Intelligence and Data Science, College of AI Convergence, Sejong University, Seoul 05006, Republic of Korea; (M.A.A.-m.); (D.H.)
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Mandal S, Ghosh S, Jana ND, Chakraborty S, Mallik S. Active Learning with Particle Swarm Optimization for Enhanced Skin Cancer Classification Utilizing Deep CNN Models. JOURNAL OF IMAGING INFORMATICS IN MEDICINE 2024:10.1007/s10278-024-01327-z. [PMID: 39557738 DOI: 10.1007/s10278-024-01327-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2024] [Revised: 09/24/2024] [Accepted: 10/29/2024] [Indexed: 11/20/2024]
Abstract
Skin cancer is a critical global health issue, with millions of non-melanoma and melanoma cases diagnosed annually. Early detection is essential to improving patient outcomes, yet traditional deep learning models for skin cancer classification are often limited by the need for large, annotated datasets and extensive computational resources. The aim of this study is to address these limitations by proposing an efficient skin cancer classification framework that integrates active learning (AL) with particle swarm optimization (PSO). The AL framework selectively identifies the most informative unlabeled instances for expert annotation, minimizing labeling costs while optimizing classifier performance. PSO, a nature-inspired metaheuristic algorithm, enhances the selection process within AL, ensuring the most relevant data points are chosen. This method was applied to train multiple Convolutional Neural Network (CNN) models on the HAM10000 skin lesion dataset. Experimental results demonstrate that the proposed AL-PSO approach significantly improves classification accuracy, with the Least Confidence strategy achieving approximately 89.4% accuracy while using only 40% of the labeled training data. This represents a substantial improvement over traditional approaches in terms of both accuracy and efficiency. The findings indicate that the integration of AL and PSO can accelerate the adoption of AI in clinical settings for skin cancer detection. The code for this study is publicly available at ( https://github.com/Sayantani-31/AL-PSO ).
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Affiliation(s)
- Sayantani Mandal
- Department of Mathematics, National Institute of Technology Durgapur, West Bengal, India
| | - Subhayu Ghosh
- Department of Computer Science and Engineering, National Institute of Technology Durgapur, West Bengal, India
| | - Nanda Dulal Jana
- Department of Computer Science and Engineering, National Institute of Technology Durgapur, West Bengal, India
| | - Somenath Chakraborty
- Department of Computer Science and Information Systems, The West Virginia University Institute of Technology, Beckley, WV, USA
| | - Saurav Mallik
- Department of Environmental Health, Harvard T H Chan School of Public Health Boston, Boston, MA, 02115, USA.
- Department of Pharmacology and Toxicology, University of Arizona Tucson, Tucson, AZ, 85721, USA.
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Hermosilla P, Soto R, Vega E, Suazo C, Ponce J. Skin Cancer Detection and Classification Using Neural Network Algorithms: A Systematic Review. Diagnostics (Basel) 2024; 14:454. [PMID: 38396492 PMCID: PMC10888121 DOI: 10.3390/diagnostics14040454] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2023] [Revised: 02/07/2024] [Accepted: 02/10/2024] [Indexed: 02/25/2024] Open
Abstract
In recent years, there has been growing interest in the use of computer-assisted technology for early detection of skin cancer through the analysis of dermatoscopic images. However, the accuracy illustrated behind the state-of-the-art approaches depends on several factors, such as the quality of the images and the interpretation of the results by medical experts. This systematic review aims to critically assess the efficacy and challenges of this research field in order to explain the usability and limitations and highlight potential future lines of work for the scientific and clinical community. In this study, the analysis was carried out over 45 contemporary studies extracted from databases such as Web of Science and Scopus. Several computer vision techniques related to image and video processing for early skin cancer diagnosis were identified. In this context, the focus behind the process included the algorithms employed, result accuracy, and validation metrics. Thus, the results yielded significant advancements in cancer detection using deep learning and machine learning algorithms. Lastly, this review establishes a foundation for future research, highlighting potential contributions and opportunities to improve the effectiveness of skin cancer detection through machine learning.
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Affiliation(s)
- Pamela Hermosilla
- Escuela de Ingeniería Informática, Pontificia Universidad Católica de Valparaíso, Avenida Brasil 2241, Valparaíso 2362807, Chile (E.V.); (C.S.); (J.P.)
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Rai HM, Yoo J, Atif Moqurrab S, Dashkevych S. Advancements in traditional machine learning techniques for detection and diagnosis of fatal cancer types: Comprehensive review of biomedical imaging datasets. MEASUREMENT 2024; 225:114059. [DOI: 10.1016/j.measurement.2023.114059] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/11/2024]
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Rai HM, Yoo J. A comprehensive analysis of recent advancements in cancer detection using machine learning and deep learning models for improved diagnostics. J Cancer Res Clin Oncol 2023; 149:14365-14408. [PMID: 37540254 DOI: 10.1007/s00432-023-05216-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2023] [Accepted: 07/26/2023] [Indexed: 08/05/2023]
Abstract
PURPOSE There are millions of people who lose their life due to several types of fatal diseases. Cancer is one of the most fatal diseases which may be due to obesity, alcohol consumption, infections, ultraviolet radiation, smoking, and unhealthy lifestyles. Cancer is abnormal and uncontrolled tissue growth inside the body which may be spread to other body parts other than where it has originated. Hence it is very much required to diagnose the cancer at an early stage to provide correct and timely treatment. Also, manual diagnosis and diagnostic error may cause of the death of many patients hence much research are going on for the automatic and accurate detection of cancer at early stage. METHODS In this paper, we have done the comparative analysis of the diagnosis and recent advancement for the detection of various cancer types using traditional machine learning (ML) and deep learning (DL) models. In this study, we have included four types of cancers, brain, lung, skin, and breast and their detection using ML and DL techniques. In extensive review we have included a total of 130 pieces of literature among which 56 are of ML-based and 74 are from DL-based cancer detection techniques. Only the peer reviewed research papers published in the recent 5-year span (2018-2023) have been included for the analysis based on the parameters, year of publication, feature utilized, best model, dataset/images utilized, and best accuracy. We have reviewed ML and DL-based techniques for cancer detection separately and included accuracy as the performance evaluation metrics to maintain the homogeneity while verifying the classifier efficiency. RESULTS Among all the reviewed literatures, DL techniques achieved the highest accuracy of 100%, while ML techniques achieved 99.89%. The lowest accuracy achieved using DL and ML approaches were 70% and 75.48%, respectively. The difference in accuracy between the highest and lowest performing models is about 28.8% for skin cancer detection. In addition, the key findings, and challenges for each type of cancer detection using ML and DL techniques have been presented. The comparative analysis between the best performing and worst performing models, along with overall key findings and challenges, has been provided for future research purposes. Although the analysis is based on accuracy as the performance metric and various parameters, the results demonstrate a significant scope for improvement in classification efficiency. CONCLUSION The paper concludes that both ML and DL techniques hold promise in the early detection of various cancer types. However, the study identifies specific challenges that need to be addressed for the widespread implementation of these techniques in clinical settings. The presented results offer valuable guidance for future research in cancer detection, emphasizing the need for continued advancements in ML and DL-based approaches to improve diagnostic accuracy and ultimately save more lives.
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Affiliation(s)
- Hari Mohan Rai
- School of Computing, Gachon University, 1342 Seongnam-daero, Sujeong-gu, Seongnam-si, 13120, Gyeonggi-do, Republic of Korea.
| | - Joon Yoo
- School of Computing, Gachon University, 1342 Seongnam-daero, Sujeong-gu, Seongnam-si, 13120, Gyeonggi-do, Republic of Korea
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Shaheen H, Singh MP. Skin lesion classification using HG-PSO and YOLOv7 based convolutional network in real time. Proc Inst Mech Eng H 2023; 237:1228-1239. [PMID: 37840254 DOI: 10.1177/09544119231198823] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2023]
Abstract
Skin cancer is a chronic illness seen visually and further diagnosed with a dermoscopic examination. It is crucial to precisely localize and classify lesions from dermoscopic images to diagnose and treat skin cancers as soon as possible. This work presents melanoma identification, and the classification method significantly improves accuracy and precision. This work proposes a method Hybrid of Genetic and Particle swarm optimization (HG-PSO), and You only look once version 7 (YOLOv7) based convolutional network for skin cancer classification. The infected region is first located using optimized YOLOv7 object detection. Then color thresholding is applied to segment it, which is passed to the proposed convolutional network for classification. This work is tested on the Human Against Machine with 10,000 training images (HAM10000), International Skin Imaging Collaboration (ISIC)-2019, and Hospital Pedro Hispano (PH2) datasets, and the findings are compared to the state-of-the-art methods for classifying skin cancer. The proposed method achieves 98.86% accuracy, 99.00% average precision, 98.85% average recall, and 98.85% average F1-score on the HAM10000 dataset. It achieves 97.10% accuracy on ISIC-2019 datasets. The average precision obtained is 97.37%, the average recall is 97.13%, and the average F1-score is 97.13% on the ISIC-2019 dataset. It achieves a 97.7% accuracy on the PH2 dataset. The average precision obtained is 99.00%, the average recall is 96.00%, and the average F1-score is 97.00% on the PH2 dataset. The test time taken by this method on datasets HAM10000, ISIC-2019, and PH2 dataset is 2, 3, and 2 s, respectively, which may help give faster responses in telemedicine.
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Affiliation(s)
- Hera Shaheen
- Department of Computer Science and Engineering, National Institute of Technology Patna, Patna, Bihar, India
| | - Maheshwari Prasad Singh
- Department of Computer Science and Engineering, National Institute of Technology Patna, Patna, Bihar, India
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Sauter D, Lodde G, Nensa F, Schadendorf D, Livingstone E, Kukuk M. Deep learning in computational dermatopathology of melanoma: A technical systematic literature review. Comput Biol Med 2023; 163:107083. [PMID: 37315382 DOI: 10.1016/j.compbiomed.2023.107083] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2022] [Revised: 05/10/2023] [Accepted: 05/27/2023] [Indexed: 06/16/2023]
Abstract
Deep learning (DL) has become one of the major approaches in computational dermatopathology, evidenced by a significant increase in this topic in the current literature. We aim to provide a structured and comprehensive overview of peer-reviewed publications on DL applied to dermatopathology focused on melanoma. In comparison to well-published DL methods on non-medical images (e.g., classification on ImageNet), this field of application comprises a specific set of challenges, such as staining artifacts, large gigapixel images, and various magnification levels. Thus, we are particularly interested in the pathology-specific technical state-of-the-art. We also aim to summarize the best performances achieved thus far with respect to accuracy, along with an overview of self-reported limitations. Accordingly, we conducted a systematic literature review of peer-reviewed journal and conference articles published between 2012 and 2022 in the databases ACM Digital Library, Embase, IEEE Xplore, PubMed, and Scopus, expanded by forward and backward searches to identify 495 potentially eligible studies. After screening for relevance and quality, a total of 54 studies were included. We qualitatively summarized and analyzed these studies from technical, problem-oriented, and task-oriented perspectives. Our findings suggest that the technical aspects of DL for histopathology in melanoma can be further improved. The DL methodology was adopted later in this field, and still lacks the wider adoption of DL methods already shown to be effective for other applications. We also discuss upcoming trends toward ImageNet-based feature extraction and larger models. While DL has achieved human-competitive accuracy in routine pathological tasks, its performance on advanced tasks is still inferior to wet-lab testing (for example). Finally, we discuss the challenges impeding the translation of DL methods to clinical practice and provide insight into future research directions.
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Affiliation(s)
- Daniel Sauter
- Department of Computer Science, Fachhochschule Dortmund, 44227 Dortmund, Germany.
| | - Georg Lodde
- Department of Dermatology, University Hospital Essen, 45147 Essen, Germany
| | - Felix Nensa
- Institute for AI in Medicine (IKIM), University Hospital Essen, 45131 Essen, Germany; Institute of Diagnostic and Interventional Radiology and Neuroradiology, University Hospital Essen, 45147 Essen, Germany
| | - Dirk Schadendorf
- Department of Dermatology, University Hospital Essen, 45147 Essen, Germany
| | | | - Markus Kukuk
- Department of Computer Science, Fachhochschule Dortmund, 44227 Dortmund, Germany
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Bi L, Celebi ME, Iyatomi H, Fernandez-Penas P, Kim J. Image analysis in advanced skin imaging technology. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2023; 238:107599. [PMID: 37244232 DOI: 10.1016/j.cmpb.2023.107599] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Affiliation(s)
- Lei Bi
- Institute of Translational Medicine, National Center for Translational Medicine, Shanghai Jiao Tong University, Shanghai, China; School of Computer Science, University of Sydney, NSW, Australia.
| | - M Emre Celebi
- Department of Computer Science and Engineering, University of Central Arkansas, Conway, AR, USA
| | - Hitoshi Iyatomi
- Faculty of Science and Engineering, Hosei University, Tokyo, Japan
| | - Pablo Fernandez-Penas
- Department of Dermatology, Westmead Hospital, NSW, Australia; Sydney Medical School, Faculty of Medicine and Health, The University of Sydney, NSW, Australia
| | - Jinman Kim
- School of Computer Science, University of Sydney, NSW, Australia
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Hasan MK, Ahamad MA, Yap CH, Yang G. A survey, review, and future trends of skin lesion segmentation and classification. Comput Biol Med 2023; 155:106624. [PMID: 36774890 DOI: 10.1016/j.compbiomed.2023.106624] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2022] [Revised: 01/04/2023] [Accepted: 01/28/2023] [Indexed: 02/03/2023]
Abstract
The Computer-aided Diagnosis or Detection (CAD) approach for skin lesion analysis is an emerging field of research that has the potential to alleviate the burden and cost of skin cancer screening. Researchers have recently indicated increasing interest in developing such CAD systems, with the intention of providing a user-friendly tool to dermatologists to reduce the challenges encountered or associated with manual inspection. This article aims to provide a comprehensive literature survey and review of a total of 594 publications (356 for skin lesion segmentation and 238 for skin lesion classification) published between 2011 and 2022. These articles are analyzed and summarized in a number of different ways to contribute vital information regarding the methods for the development of CAD systems. These ways include: relevant and essential definitions and theories, input data (dataset utilization, preprocessing, augmentations, and fixing imbalance problems), method configuration (techniques, architectures, module frameworks, and losses), training tactics (hyperparameter settings), and evaluation criteria. We intend to investigate a variety of performance-enhancing approaches, including ensemble and post-processing. We also discuss these dimensions to reveal their current trends based on utilization frequencies. In addition, we highlight the primary difficulties associated with evaluating skin lesion segmentation and classification systems using minimal datasets, as well as the potential solutions to these difficulties. Findings, recommendations, and trends are disclosed to inform future research on developing an automated and robust CAD system for skin lesion analysis.
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Affiliation(s)
- Md Kamrul Hasan
- Department of Bioengineering, Imperial College London, UK; Department of Electrical and Electronic Engineering (EEE), Khulna University of Engineering & Technology (KUET), Khulna 9203, Bangladesh.
| | - Md Asif Ahamad
- Department of Electrical and Electronic Engineering (EEE), Khulna University of Engineering & Technology (KUET), Khulna 9203, Bangladesh.
| | - Choon Hwai Yap
- Department of Bioengineering, Imperial College London, UK.
| | - Guang Yang
- National Heart and Lung Institute, Imperial College London, UK; Cardiovascular Research Centre, Royal Brompton Hospital, UK.
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Integrated Design of Optimized Weighted Deep Feature Fusion Strategies for Skin Lesion Image Classification. Cancers (Basel) 2022; 14:cancers14225716. [PMID: 36428808 PMCID: PMC9688253 DOI: 10.3390/cancers14225716] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2022] [Revised: 11/11/2022] [Accepted: 11/11/2022] [Indexed: 11/23/2022] Open
Abstract
This study mainly focuses on pre-processing the HAM10000 and BCN20000 skin lesion datasets to select important features that will drive for proper skin cancer classification. In this work, three feature fusion strategies have been proposed by utilizing three pre-trained Convolutional Neural Network (CNN) models, namely VGG16, EfficientNet B0, and ResNet50 to select the important features based on the weights of the features and are coined as Adaptive Weighted Feature Set (AWFS). Then, two other strategies, Model-based Optimized Weighted Feature Set (MOWFS) and Feature-based Optimized Weighted Feature Set (FOWFS), are proposed by optimally and adaptively choosing the weights using a meta-heuristic artificial jellyfish (AJS) algorithm. The MOWFS-AJS is a model-specific approach whereas the FOWFS-AJS is a feature-specific approach for optimizing the weights chosen for obtaining optimal feature sets. The performances of those three proposed feature selection strategies are evaluated using Decision Tree (DT), Naïve Bayesian (NB), Multi-Layer Perceptron (MLP), and Support Vector Machine (SVM) classifiers and the performance are measured through accuracy, precision, sensitivity, and F1-score. Additionally, the area under the receiver operating characteristics curves (AUC-ROC) is plotted and it is observed that FOWFS-AJS shows the best accuracy performance based on the SVM with 94.05% and 94.90%, respectively, for HAM 10000 and BCN 20000 datasets. Finally, the experimental results are also analyzed using a non-parametric Friedman statistical test and the computational times are recorded; the results show that, out of those three proposed feature selection strategies, the FOWFS-AJS performs very well because its quick converging nature is inculcated with the help of AJS.
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