Examining multiple feature evaluation and classification methods for improving the diagnosis of Parkinson’s disease

Pose-based tremor type and level analysis for Parkinson's disease from video

PURPOSE

Current methods for diagnosis of PD rely on clinical examination. The accuracy of diagnosis ranges between 73 and 84%, and is influenced by the experience of the clinical assessor. Hence, an automatic, effective and interpretable supporting system for PD symptom identification would support clinicians in making more robust PD diagnostic decisions.

METHODS

We propose to analyze Parkinson's tremor (PT) to support the analysis of PD, since PT is one of the most typical symptoms of PD with broad generalizability. To realize the idea, we present SPA-PTA, a deep learning-based PT classification and severity estimation system that takes consumer-grade videos of front-facing humans as input. The core of the system is a novel attention module with a lightweight pyramidal channel-squeezing-fusion architecture that effectively extracts relevant PT information and filters noise. It enhances modeling performance while improving system interpretability.

RESULTS

We validate our system via individual-based leave-one-out cross-validation on two tasks: the PT classification task and the tremor severity rating estimation task. Our system presents a 91.3% accuracy and 80.0% F1-score in classifying PT with non-PT class, while providing a 76.4% accuracy and 76.7% F1-score in more complex multiclass tremor rating classification task.

CONCLUSION

Our system offers a cost-effective PT classification and tremor severity estimation results as warning signs of PD for undiagnosed patients with PT symptoms. In addition, it provides a potential solution for supporting PD diagnosis in regions with limited clinical resources.

A Review of Machine Learning Algorithms for Biomedical Applications

As the amount and complexity of biomedical data continue to increase, machine learning methods are becoming a popular tool in creating prediction models for the underlying biomedical processes. Although all machine learning methods aim to fit models to data, the methodologies used can vary greatly and may seem daunting at first. A comprehensive review of various machine learning algorithms per biomedical applications is presented. The key concepts of machine learning are supervised and unsupervised learning, feature selection, and evaluation metrics. Technical insights on the major machine learning methods such as decision trees, random forests, support vector machines, and k-nearest neighbors are analyzed. Next, the dimensionality reduction methods like principal component analysis and t-distributed stochastic neighbor embedding methods, and their applications in biomedical data analysis were reviewed. Moreover, in biomedical applications predominantly feedforward neural networks, convolutional neural networks, and recurrent neural networks are utilized. In addition, the identification of emerging directions in machine learning methodology will serve as a useful reference for individuals involved in biomedical research, clinical practice, and related professions who are interested in understanding and applying machine learning algorithms in their research or practice.

Empirical exploration of whale optimisation algorithm for heart disease prediction

Heart Diseases have the highest mortality worldwide, necessitating precise predictive models for early risk assessment. Much existing research has focused on improving model accuracy with single datasets, often neglecting the need for comprehensive evaluation metrics and utilization of different datasets in the same domain (heart disease). This research introduces a heart disease risk prediction approach by harnessing the whale optimization algorithm (WOA) for feature selection and implementing a comprehensive evaluation framework. The study leverages five distinct datasets, including the combined dataset comprising the Cleveland, Long Beach VA, Switzerland, and Hungarian heart disease datasets. The others are the Z-AlizadehSani, Framingham, South African, and Cleveland heart datasets. The WOA-guided feature selection identifies optimal features, subsequently integrated into ten classification models. Comprehensive model evaluation reveals significant improvements across critical performance metrics, including accuracy, precision, recall, F1 score, and the area under the receiver operating characteristic curve. These enhancements consistently outperform state-of-the-art methods using the same dataset, validating the effectiveness of our methodology. The comprehensive evaluation framework provides a robust assessment of the model's adaptability, underscoring the WOA's effectiveness in identifying optimal features in multiple datasets in the same domain.

Radiomics for Parkinson's disease classification using advanced texture-based biomarkers

Parkinson's disease (PD) is one of the neurodegenerative diseases and its manual diagnosis leads to time-consuming process. MRI-based computer-aided diagnosis helps medical experts to diagnose PD more precisely and fast. Texture-based radiomic analysis is carried out on 3D MRI scans of T1 weighted and resting-state modalities. 43 subjects from Neurocon and 40 subjects from Tao-Wu dataset were examined, which consisted of 36 scans of healthy controls and 47 scans of Parkinson's patients. Total 360 2D MRI images are selected among around 17000 slices of T1-weighted and resting scans of selected 72 subjects. Local binary pattern (LBP) method was applied with custom variants to acquire advanced textural biomarkers from MRI images. LBP histogram helped to learn discriminative local patterns to detect and classify Parkinson's disease. Using recursive feature elimination, data dimensions of around 150-300 LBP histogram features were reduced to 13-21 most significant features based on score, and important features were analysed using SVM and random forest algorithms. Variant-I of LBP has performed well with highest test accuracy of 83.33%, precision of 84.62%, recall of 91.67%, and f1-score of 88%. Classification accuracies were obtained from 61.11% to 83.33% and AUC-ROC values range from 0.43 to 0.86 using four variants of LBP.•Parkinson's classification is carried out using an advanced biomedical texture feature. Texture extraction using four variants of uniform, rotation invariant LBP method is performed for radiomic analysis of Parkinson's disorder.•Proposed method with support vector machine classifier is experimented and an accuracy of 83.33% is achieved with 10-fold cross validation for detection of Parkinson's patients from MRI-based radiomic analysis.•The proposed predictive model has proved the potential of textures of extended version of LBP, which have demonstrated subtle variations in local appearance for Parkinson's detection.

Graph Neural Networks for Parkinson's Disease Monitoring and Alerting

Graph neural networks (GNNs) have been increasingly employed in the field of Parkinson's disease (PD) research. The use of GNNs provides a promising approach to address the complex relationship between various clinical and non-clinical factors that contribute to the progression of PD. This review paper aims to provide a comprehensive overview of the state-of-the-art research that is using GNNs for PD. It presents PD and the motivation behind using GNNs in this field. Background knowledge on the topic is also presented. Our research methodology is based on PRISMA, presenting a comprehensive overview of the current solutions using GNNs for PD, including the various types of GNNs employed and the results obtained. In addition, we discuss open issues and challenges that highlight the limitations of current GNN-based approaches and identify potential paths for future research. Finally, a new approach proposed in this paper presents the integration of new tasks for the engineering of GNNs for PD monitoring and alert solutions.

New era of artificial intelligence and machine learning-based detection, diagnosis, and therapeutics in Parkinson's disease

Parkinson's disease (PD) is characterized by the loss of neuronal cells, which leads to synaptic dysfunction and cognitive defects. Despite the advancements in treatment strategies, the management of PD is still a challenging event. Early prediction and diagnosis of PD are of utmost importance for effective management of PD. In addition, the classification of patients with PD as compared to normal healthy individuals also imposes drawbacks in the early diagnosis of PD. To address these challenges, artificial intelligence (AI) and machine learning (ML) models have been implicated in the diagnosis, prediction, and treatment of PD. Recent times have also demonstrated the implication of AI and ML models in the classification of PD based on neuroimaging methods, speech recording, gait abnormalities, and others. Herein, we have briefly discussed the role of AI and ML in the diagnosis, treatment, and identification of novel biomarkers in the progression of PD. We have also highlighted the role of AI and ML in PD management through altered lipidomics and gut-brain axis. We briefly explain the role of early PD detection through AI and ML algorithms based on speech recordings, handwriting patterns, gait abnormalities, and neuroimaging techniques. Further, the review discuss the potential role of the metaverse, the Internet of Things, and electronic health records in the effective management of PD to improve the quality of life. Lastly, we also focused on the implementation of AI and ML-algorithms in neurosurgical process and drug discovery.

Early and High-Accuracy Diagnosis of Parkinson's Disease: Outcomes of a New Model

Parkinson's disease (PD) is one of the significant common neurological disorders of the current age that causes uncontrollable movements like shaking, stiffness, and difficulty. The early clinical diagnosis of this disease is essential for preventing the progression of PD. Hence, an innovative method is proposed here based on combining the crow search algorithm and decision tree (CSADT) for the early PD diagnosis. This approach is used on four crucial Parkinson's datasets, including meander, spiral, voice, and speech-Sakar. Using the presented method, PD is effectively diagnosed by evaluating each dataset's critical features and extracting the primary practical outcomes. The used algorithm was compared with other machine learning algorithms of k-nearest neighbor (KNN), support vector machine (SVM), naive Baye (NB), multilayer perceptron (MLP), decision tree (DT), random tree, logistic regression, support vector machine of radial base functions (SVM of RBFs), and combined classifier in terms of accuracy, recall, and combination measure F1. The analytical results emphasize the used algorithm's superiority over the other selected ones. The proposed model yields nearly 100% accuracy through various trials on the datasets. Notably, a high detection speed achieved the lowest detection time of 2.6 seconds. The main novelty of this paper is attributed to the accuracy of the presented PD diagnosis method, which is much higher than its counterparts.

Automatic and Early Detection of Parkinson's Disease by Analyzing Acoustic Signals Using Classification Algorithms Based on Recursive Feature Elimination Method

Parkinson's disease (PD) is a neurodegenerative condition generated by the dysfunction of brain cells and their 60-80% inability to produce dopamine, an organic chemical responsible for controlling a person's movement. This condition causes PD symptoms to appear. Diagnosis involves many physical and psychological tests and specialist examinations of the patient's nervous system, which causes several issues. The methodology method of early diagnosis of PD is based on analysing voice disorders. This method extracts a set of features from a recording of the person's voice. Then machine-learning (ML) methods are used to analyse and diagnose the recorded voice to distinguish Parkinson's cases from healthy ones. This paper proposes novel techniques to optimize the techniques for early diagnosis of PD by evaluating selected features and hyperparameter tuning of ML algorithms for diagnosing PD based on voice disorders. The dataset was balanced by the synthetic minority oversampling technique (SMOTE) and features were arranged according to their contribution to the target characteristic by the recursive feature elimination (RFE) algorithm. We applied two algorithms, t-distributed stochastic neighbour embedding (t-SNE) and principal component analysis (PCA), to reduce the dimensions of the dataset. Both t-SNE and PCA finally fed the resulting features into the classifiers support-vector machine (SVM), K-nearest neighbours (KNN), decision tree (DT), random forest (RF), and multilayer perception (MLP). Experimental results proved that the proposed techniques were superior to existing studies in which RF with the t-SNE algorithm yielded an accuracy of 97%, precision of 96.50%, recall of 94%, and F1-score of 95%. In addition, MLP with the PCA algorithm yielded an accuracy of 98%, precision of 97.66%, recall of 96%, and F1-score of 96.66%.

BenchMetrics Prob: benchmarking of probabilistic error/loss performance evaluation instruments for binary classification problems

Probabilistic error/loss performance evaluation instruments that are originally used for regression and time series forecasting are also applied in some binary-class or multi-class classifiers, such as artificial neural networks. This study aims to systematically assess probabilistic instruments for binary classification performance evaluation using a proposed two-stage benchmarking method called BenchMetrics Prob. The method employs five criteria and fourteen simulation cases based on hypothetical classifiers on synthetic datasets. The goal is to reveal specific weaknesses of performance instruments and to identify the most robust instrument in binary classification problems. The BenchMetrics Prob method was tested on 31 instrument/instrument variants, and the results have identified four instruments as the most robust in a binary classification context: Sum Squared Error (SSE), Mean Squared Error (MSE), Root Mean Squared Error (RMSE, as the variant of MSE), and Mean Absolute Error (MAE). As SSE has lower interpretability due to its [0, ∞) range, MAE in [0, 1] is the most convenient and robust probabilistic metric for generic purposes. In classification problems where large errors are more important than small errors, RMSE may be a better choice. Additionally, the results showed that instrument variants with summarization functions other than mean (e.g., median and geometric mean), LogLoss, and the error instruments with relative/percentage/symmetric-percentage subtypes for regression, such as Mean Absolute Percentage Error (MAPE), Symmetric MAPE (sMAPE), and Mean Relative Absolute Error (MRAE), were less robust and should be avoided. These findings suggest that researchers should employ robust probabilistic metrics when measuring and reporting performance in binary classification problems.

Intelligent personalized diagnosis modeling in advanced medical system for Parkinson's disease using voice signals

Currently, machine learning methods have been utilized to realize the early detection of Parkinson's disease (PD) by using voice signals. Because the vocal system of each person is unique, and the same person's pronunciation can be different at different times, the training samples used in machine learning become very different from the speech signal of the patient to be diagnosed, frequently resulting in poor diagnostic performance. On this account, this paper presents a new intelligent personalized diagnosis method (PDM) for Parkinson's disease. The method was designed to begin with constructing new training data by assigning the best classifier to each training sample composed of features from the speech signals of patients. Subsequently, a meta-classifier was trained on the new training data. Finally, for the signal of each test patient, the method used the meta-classifier to select the most appropriate classifier, followed by adopting the selected classifier to classify the signal so that the more accurate diagnosis result of the test patient can be obtained. The novelty of the proposed method is that the proposed method uses different classifiers to perform the diagnosis of PD for diversified patients, whereas the current method uses the same classifier to diagnose all patients to be tested. Results of a large number of experiments show that PDM not only improves the performance but also exceeds the existing methods in speed.

Leveraging Computational Intelligence Techniques for Diagnosing Degenerative Nerve Diseases: A Comprehensive Review, Open Challenges, and Future Research Directions

Degenerative nerve diseases such as Alzheimer's and Parkinson's diseases have always been a global issue of concern. Approximately 1/6th of the world's population suffers from these disorders, yet there are no definitive solutions to cure these diseases after the symptoms set in. The best way to treat these disorders is to detect them at an earlier stage. Many of these diseases are genetic; this enables machine learning algorithms to give inferences based on the patient's medical records and history. Machine learning algorithms such as deep neural networks are also critical for the early identification of degenerative nerve diseases. The significant applications of machine learning and deep learning in early diagnosis and establishing potential therapies for degenerative nerve diseases have motivated us to work on this review paper. Through this review, we covered various machine learning and deep learning algorithms and their application in the diagnosis of degenerative nerve diseases, such as Alzheimer's disease and Parkinson's disease. Furthermore, we also included the recent advancements in each of these models, which improved their capabilities for classifying degenerative nerve diseases. The limitations of each of these methods are also discussed. In the conclusion, we mention open research challenges and various alternative technologies, such as virtual reality and Big data analytics, which can be useful for the diagnosis of degenerative nerve diseases.

A State-of-the-Art Survey on Various Domains of Multi-Agent Systems and Machine Learning

Multi-agent systems (MASs) are defined as a group of interacting entities or agents sharing a common environment that changes over time, with capabilities of perception and action, and the mechanisms for their coordination provide a modern perspective on systems that traditionally were regarded as centralized. The main characteristics of agents are learning and adaptation. In the last few years, MASs have received tremendous attention from scholars in different fields. However, there are still challenges faced by MASs and their integration with machine learning (ML) methods. The primary goal of the study is to provide a broad review of the current developments in the field of MASs combined with ML methods. First, we present features of MASs considering the ML perspective. Second, we provide a classification of applications of MASs combined with ML methods. Third, we present a density map of applications in E-learning, manufacturing, and commerce. We expect this study to serve as a comprehensive resource for researchers and practitioners in the area.

Analysis Model of Personality and Psychological Characteristics of Network Users under High-Pressure Working Environment

Based on the prediction of social network psychological indicators, this paper studies the analysis model of network users’ personality and psychological characteristics under a high-pressure working environment. Through the analysis of five common network users’ personalities, the characteristics of personality psychology are extracted. Combined with the high-pressure working environment, this paper analyzes the characteristics of network users’ personalities and psychology, collects the characteristics of network users’ personality themes, and analyzes the characteristics of the dynamic extended dictionary. In order to ensure the accuracy of feature analysis, the author’s LDA algorithm is used to predict the network short text psychological index of network users under a high-pressure working environment. The experimental results show that the model designed in this paper is better than the traditional method in practical application.

Deep learning reveals personalized spatial spectral abnormalities of high delta and low alpha bands in EEG of patients with early Parkinson's disease

Objective.Parkinson's disease (PD) is one of the most common neurodegenerative diseases, and early diagnosis is crucial to delay disease progression. The diagnosis of early PD has always been a difficult clinical problem due to the lack of reliable biomarkers. Electroencephalogram (EEG) is the most common clinical detection method, and studies have attempted to discover the EEG spectrum characteristics of early PD, but the reported conclusions are not uniform due to the heterogeneity of early PD patients. There is an urgent need for a more advanced algorithm to extract spectrum characteristics from EEG to satisfy the personalized requirements.Approach.The structured power spectral density with spatial distribution was used as the input of convolutional neural network (CNN). A visualization technique called gradient-weighted class activation mapping was used to extract the optimal frequency bands for identifying early PD. Based on the model visualization, we proposed a novel quantitative index of spectral characteristics, spatial-mapping relative power (SRP), to detect personalized abnormalities in the spatial spectral characteristics of EEG in early PD.Main results.We demonstrated the feasibility of applying CNN to identify the patients with early PD with an accuracy of 99.87% ± 0.03%. The models indicated the characteristic frequency bands (high-delta (3.5-4.5 Hz) and low-alpha (7.5-11 Hz) frequency bands) that are used to identify the early PD. The SRP of these two characteristic bands in early PD patients was significantly higher than that in the control group, and the abnormalities were consistent at the group and individual levels.Significance.This study provides a novel personalized detection algorithm based on deep learning to reveal the optimal frequency bands for identifying early PD and obtain the spatial frequency characteristics of early PD. The findings of this study will provide an effective reference for the auxiliary diagnosis of early PD in clinical practice.

COVID-19 anomaly detection and classification method based on supervised machine learning of chest X-ray images

The term COVID-19 is an abbreviation of Coronavirus 2019, which is considered a global pandemic that threatens the lives of millions of people. Early detection of the disease offers ample opportunity of recovery and prevention of spreading. This paper proposes a method for classification and early detection of COVID-19 through image processing using X-ray images. A set of procedures are applied, including preprocessing (image noise removal, image thresholding, and morphological operation), Region of Interest (ROI) detection and segmentation, feature extraction, (Local binary pattern (LBP), Histogram of Gradient (HOG), and Haralick texture features) and classification (K-Nearest Neighbor (KNN) and Support Vector Machine (SVM)). The combinations of the feature extraction operators and classifiers results in six models, namely LBP-KNN, HOG-KNN, Haralick-KNN, LBP-SVM, HOG-SVM, and Haralick-SVM. The six models are tested based on test samples of 5,000 images with the percentage of training of 5-folds cross-validation. The evaluation results show high diagnosis accuracy from 89.2% up to 98.66%. The LBP-KNN model outperforms the other models in which it achieves an average accuracy of 98.66%, a sensitivity of 97.76%, specificity of 100%, and precision of 100%. The proposed method for early detection and classification of COVID-19 through image processing using X-ray images is proven to be usable in which it provides an end-to-end structure without the need for manual feature extraction and manual selection methods.

Evaluation of Feature Selection Methods for Mammographic Breast Cancer Diagnosis in a Unified Framework

Over recent years, feature selection (FS) has gained more attention in intelligent diagnosis. This study is aimed at evaluating FS methods in a unified framework for mammographic breast cancer diagnosis. After FS methods generated rank lists according to feature importance, the framework added features incrementally as the input of random forest which performed as the classifier for breast lesion classification. In this study, 10 FS methods were evaluated and the digital database for screening mammography (1104 benign and 980 malignant lesions) was analyzed. The classification performance was quantified with the area under the curve (AUC), and accuracy, sensitivity, and specificity were also considered. Experimental results suggested that both infinite latent FS method (AUC, 0.866 ± 0.028) and RELIEFF (AUC, 0.855 ± 0.020) achieved good prediction (AUC ≥ 0.85) when 6 features were used, followed by correlation-based FS method (AUC, 0.867 ± 0.023) using 7 features and WILCOXON (AUC, 0.887 ± 0.019) using 8 features. The reliability of the diagnosis models was also verified, indicating that correlation-based FS method was generally superior over other methods. Identification of discriminative features among high-throughput ones remains an unavoidable challenge in intelligent diagnosis, and extra efforts should be made toward accurate and efficient feature selection.

Local Pattern Transformation Based Feature Extraction for Recognition of Parkinson's Disease Based on Gait Signals

Parkinson’s disease (PD) is a neuro-degenerative disorder primarily triggered due to the deterioration of dopamine-producing neurons in the substantia nigra of the human brain. The early detection of Parkinson’s disease can assist in preventing deteriorating health. This paper analyzes human gait signals using Local Binary Pattern (LBP) techniques during feature extraction before classification. Supplementary to the LBP techniques, Local Gradient Pattern (LGP), Local Neighbour Descriptive Pattern (LNDP), and Local Neighbour Gradient Pattern (LNGP) were utilized to extract features from gait signals. The statistical features were derived and analyzed, and the statistical Kruskal–Wallis test was carried out for the selection of an optimal feature set. The classification was then carried out by an Artificial Neural Network (ANN) for the identified feature set. The proposed Symmetrically Weighted Local Neighbour Gradient Pattern (SWLNGP) method achieves a better performance, with 96.28% accuracy, 96.57% sensitivity, and 95.94% specificity. This study suggests that SWLNGP could be an effective feature extraction technique for the recognition of Parkinsonian gait.

Machine Learning Methods with Decision Forests for Parkinson’s Detection

Biomedical engineers prefer decision forests over traditional decision trees to design state-of-the-art Parkinson’s Detection Systems (PDS) on massive acoustic signal data. However, the challenges that the researchers are facing with decision forests is identifying the minimum number of decision trees required to achieve maximum detection accuracy with the lowest error rate. This article examines two recent decision forest algorithms Systematically Developed Forest (SysFor), and Decision Forest by Penalizing Attributes (ForestPA) along with the popular Random Forest to design three distinct Parkinson’s detection schemes with optimum number of decision trees. The proposed approach undertakes minimum number of decision trees to achieve maximum detection accuracy. The training and testing samples and the density of trees in the forest are kept dynamic and incremental to achieve the decision forests with maximum capability for detecting Parkinson’s Disease (PD). The incremental tree densities with dynamic training and testing of decision forests proved to be a better approach for detection of PD. The proposed approaches are examined along with other state-of-the-art classifiers including the modern deep learning techniques to observe the detection capability. The article also provides a guideline to generate ideal training and testing split of two modern acoustic datasets of Parkinson’s and control subjects donated by the Department of Neurology in Cerrahpaşa, Istanbul and Departamento de Matemáticas, Universidad de Extremadura, Cáceres, Spain. Among the three proposed detection schemes the Forest by Penalizing Attributes (ForestPA) proved to be a promising Parkinson’s disease detector with a little number of decision trees in the forest to score the highest detection accuracy of 94.12% to 95.00%.

Classification of PPMI MRI scans with voxel-based morphometry and machine learning to assist in the diagnosis of Parkinson's disease

BACKGROUND AND OBJECTIVES

Qualitative and quantitative analyses of Magnetic Resonance Imaging (MRI) scans are carried out to study and understand Parkinson's Disease, the second most common neurodegenerative disorder in people at their 60's. Some quantitative analyses are based on the application of voxel-based morphometry (VBM) on magnetic resonance images to determine the regions of interest, within gray matter, where there is a loss of the nerve cells that generate dopamine. This loss of dopamine is indicative of Parkinson's disease. The purpose of this research is the introduction of a new method to classify the 3-D magnetic resonance scans of an individual, as an assisting tool for diagnosis of Parkinson's disease by using the largest MRI dataset (Parkinson's Progression Markers Initiative) from a population of patients with Parkinson's disease and control individuals. A contribution is that separate studies are conducted for men and women since gender plays a significant role within Neurobiology, which is demonstrated by the fact that men are more prone to Parkinson's disease than women are.

METHODS

Previous to classification, VBM is conducted on magnetic resonance images to detect the regions where features are extracted by using first- and second-order statistics methods. Furthermore, the number of features is considerably reduced by using feature selection techniques. Seven classifiers are used and we are conducting separate experiments for men and women.

RESULTS

The best detection performance achieved in men is 99.01% of accuracy, 99.35% of sensitivity, 100% of specificity, and 100% of precision. The best detection performance achieved in women is 96.97% of accuracy, 100% of sensitivity, 96.15% of specificity, and 97.22% of precision. During classification of magnetic resonance images, the corresponding computational complexity is reduced since few features are selected.

CONCLUSIONS

The proposed method provides high performance as an assisting tool in the diagnosis of Parkinson's disease, by conducting separate experiments in men and women. While previous works have focused their analysis to the striatum region of the brain (the largest nuclear complex of the basal ganglia), the proposed approach is based on analysis over the whole brain by looking for decreases of tissue thickness, with the consequence of finding other regions of interest such as the cortex.

Developing Sustainable Classification of Diseases via Deep Learning and Semi-Supervised Learning

Disease classification based on machine learning has become a crucial research topic in the fields of genetics and molecular biology. Generally, disease classification involves a supervised learning style; i.e., it requires a large number of labelled samples to achieve good classification performance. However, in the majority of the cases, labelled samples are hard to obtain, so the amount of training data are limited. However, many unclassified (unlabelled) sequences have been deposited in public databases, which may help the training procedure. This method is called semi-supervised learning and is very useful in many applications. Self-training can be implemented using high- to low-confidence samples to prevent noisy samples from affecting the robustness of semi-supervised learning in the training process. The deep forest method with the hyperparameter settings used in this paper can achieve excellent performance. Therefore, in this work, we propose a novel combined deep learning model and semi-supervised learning with self-training approach to improve the performance in disease classification, which utilizes unlabelled samples to update a mechanism designed to increase the number of high-confidence pseudo-labelled samples. The experimental results show that our proposed model can achieve good performance in disease classification and disease-causing gene identification.

Application of data mining for predicting hemodynamics instability during pheochromocytoma surgery

Background

Surgical resection of pheochromocytoma may lead to high risk factors for intraoperative hemodynamic instability (IHD), which can be life-threatening. This study aimed to investigate the risk factors that could predict IHD during pheochromocytoma surgery by data mining.

Method

Relief-F was used to select the most important features. The accuracies of seven data mining models (CART, C4.5, C5.0, and C5.0 boosted), random forest algorithm, Naive Bayes and logistic regression were compared, the cross-validation, hold-out, and bootstrap methods were used in the validation phase. The accuracy of these models was calculated independently by dividing the training and the test sets. Receiver-Operating Characteristic curves were used to obtain the area under curve (AUC).

Result

Random forest had the highest AUC and accuracy values of 0.8636 and 0.8509, respectively. Then, we improved the random forest algorithm according to the classification of imbalanced data. Improved random forest model had the highest specificity and precision among all algorithms, including relatively higher sensitivity (recall) and the highest f1-score integrating recall and precision. The important attributes were body mass index, mean age, 24 h urine vanillylmandelic acid/upper normal limit value, tumor size and enhanced computed tomography difference.

Conclusions

The improved random forest algorithm may be useful in predicting IHD risk factors in pheochromocytoma surgery. Data mining technologies are being increasingly applied in clinical and medical decision-making, and provide continually expanding support for the diagnosis, treatment, and prevention of various diseases.

Voice Pathology Detection and Classification Using Convolutional Neural Network Model

Voice pathology disorders can be effectively detected using computer-aided voice pathology classification tools. These tools can diagnose voice pathologies at an early stage and offering appropriate treatment. This study aims to develop a powerful feature extraction voice pathology detection tool based on Deep Learning. In this paper, a pre-trained Convolutional Neural Network (CNN) was applied to a dataset of voice pathology to maximize the classification accuracy. This study also proposes a distinguished training method combined with various training strategies in order to generalize the application of the proposed system on a wide range of problems related to voice disorders. The proposed system has tested using a voice database, namely the Saarbrücken voice database (SVD). The experimental results show the proposed CNN method for speech pathology detection achieves accuracy up to 95.41%. It also obtains 94.22% and 96.13% for F1-Score and Recall. The proposed system shows a high capability of the real-clinical application that offering a fast-automatic diagnosis and treatment solutions within 3 s to achieve the classification accuracy.