Controlled compaction and decompaction of DNA by zwitterionic surfactants

Demonstration of pH-controlled DNA-surfactant manipulation for biomolecules

The understanding of DNA-surfactant interactions is important for fundamental physical biology and developing biomedical applications. In the present study, we demonstrated a DNA-surfactant nano-machine model by modulating the compaction of DNA in dodecyldimethylamine oxide (DDAO) solutions. By controlling DDAO concentration and pH of solution, we are able to adjust the compacting force of DNA so as to pull biomolecular subunits connected to it. The pulling force of the machine depends on DDAO concentration and pH of solution, ranging from near zero to about 4.6 pN for 10 mM DDAO concentration at pH = 4. The response time of the machine is about 3 minutes for contracting and 2 minutes for releasing in 5 mM DDAO solution. We found that DDAO has no significant influence on DNA under basic conditions, but compacts DNA under acidic conditions, which is enhanced with decreasing pH of solution. Meanwhile, we found the accompanying charge inversion of DNA in the process of DNA compaction by DDAO.

Zwitterionic Surfactant Micelle-Directed Self-Assembly of Eu-Containing Polyoxometalate into Organized Nanobelts with Improved Emission and pH Responsiveness

Recently, hybrid coassembly between polyoxometalates (POMs) and cationic building blocks provides an efficient strategy to greatly optimize POMs' functionality as well as their aggregate structural diversity. Adaptive hybrid supramolecular materials with enhanced luminescence have then been obtained from lanthanide-containing POMs. In this work, a commercially available and pH-switchable zwitterionic surfactant, tetradecyldimethylamine oxide (C₁₄DMAO), was chosen to coassemble with a lanthanide-containing anionic POM [Na₉(EuW₁₀O₃₆)·32H₂O, abbreviated as EuW₁₀] in water. The much improved red-emitting luminescent nanobelts at a C₁₄DMAO/EuW₁₀ molar ratio ( R) of 20 were obtained, which exhibited longer luminescence lifetime and higher quantum yield compared with EuW₁₀ aqueous solution. After careful characterization of morphology and structure of nanobelts, an unusual axial lamellar aggregation arrangement mechanism was proposed. It was the partial protonation of C₁₄DMAO at the solution pH of about 6.5 that led to positively charged micelles, being bridged by anionic EuW₁₀ clusters to aggregate into such novel nanobelts under the synergetic effects of appropriate electrostatic, hydrogen-bonding, and hydrophobic interactions. The resulted pH-responsive luminescent nanobelts and their aggregation model should offer attractive references for preparing smart optical supramolecular materials.

Properties of polyplexes formed through interaction between hydrophobically-modified poly(ethylene imine)s and calf thymus DNA in aqueous solution

Polycationic polymers and DNA form soluble complexes in aqueous solution, which allows the transfer of genetic material into cells. Therefore, these chemically-modified polymers are of interest for use in studies aimed at better transfection efficiency and gene expression along with reduced cytotoxicity. In this study, branched poly(ethylene imine) (PEI) was modified by alkylation with n-alkyl groups (n = 4, 6, 8 and 12 carbons). The polyplexes formed through interaction of the modified PEIs and calf thymus DNA (ctDNA) were investigated using UV-Vis spectrophotometry, ethidium bromide fluorescence emission, circular dichroism spectroscopy, dynamic light scattering, and small-angle X-ray scattering techniques along with the determination of the zeta potential and viscosity. According to the results obtained, the formation of ctDNA-PEI polyplexes occurs in three steps. Firstly, when a small amount of polyelectrolyte is present the ctDNA chains are partially compacted. Subsequently, with the addition of more polyelectrolyte, the complexes have a null charge density and micrometric size. Lastly, with a higher concentration of PEI, the ctDNA is fully compacted by the PEI chains, leading to positively charged complexes with R_h values in the range of 52.0-86.0 nm. The viscosity and SAXS analysis suggested that the unmodified PEI exhibits the strongest interaction and promotes the best ctDNA condensation.