Hologram QSAR study on the critical micelle concentration of Gemini surfactants

QSPR for the prediction of critical micelle concentration of different classes of surfactants using machine learning algorithms

The determination of the critical micelle concentration (CMC) is a crucial factor when evaluating surfactants, making it an essential tool in studying the properties of surfactants in various industrial fields. In this present research, we assembled a comprehensive set of 593 different classes of surfactants including, anionic, cationic, nonionic, zwitterionic, and Gemini surfactants to establish a link between their molecular structure and the negative logarithmic value of critical micelle concentration (pCMC) utilizing quantitative structure-property relationship (QSPR) methodologies. Statistical analysis revealed that a set of 14 significant Mordred descriptors (SlogP, GATS6d, nAcid, GATS8dv, GATS4dv, PEOE_VSA11, GATS8d, ATS0p, GATS1d, MATS5p, GATS3d, NdssC, GATS6dv and EState_VSA4), along with temperature, served as appropriate inputs. Different machine learning methods, such as multiple linear regression (MLR), random forest regression (RFR), artificial neural network (ANN), and support vector regression (SVM), were employed in this study to build QSPR models. According to the statistical coefficients of QSPR models, SVR with Dragonfly hyperparameter optimization (SVR-DA) was the most accurate in predicting pCMC values, achieving (R2 = 0.9740, Q2 = 0.9739, r‾m2 = 0.9627, and Δrm2 = 0.0244) for the entire dataset.

Study on the association and phase separation behavior of surfactants and promethazine hydrochloride: impact of ammonium electrolytes

In the current study, the association and phase separation of cationic tetradecyltrimethylammonium bromide (TTAB) and nonionic Triton X-100 (TX-100) surfactants with promethazine hydrochloride (PMH) were investigated in aqueous ammonium-based solutions. The micellization nature of the TTAB and PMH drug mixture was examined by evaluating critical micelle concentration (CMC) and counterion binding extent (β) at different salt contents and temperatures (298.15-323.15 K). Micelle formation in the TTAB + PMH mixture was enhanced in the presence of ammonium salts, whereas the process was delayed with an increase in temperature in the respective salt solution. With an increase in salt content, the cloud point (CP) of the TX-100 + PMH mixture decreased, which revealed that the respective progression occurred through the salting out phenomenon. In micellization and clouding processes, the changes in free energies ΔG0m and ΔG0c were found to be negative and positive, respectively, demonstrating that the corresponding processes are spontaneous and non-spontaneous. Standard enthalpies (ΔH0m/ΔH0c) and standard entropies (ΔS0m/ΔS0c) for the association and clouding processes, respectively, were also calculated and discussed. The core forces amid TTAB/TX-100 and PMH in the manifestation of electrolytes are dipole-dipole and hydrophobic forces among the employed components according to the values for ΔH0m/ΔH0c and ΔS0m/ΔS0c, respectively.

MASSA Algorithm: an automated rational sampling of training and test subsets for QSAR modeling

QSAR models capable of predicting biological, toxicity, and pharmacokinetic properties were widely used to search lead bioactive molecules in chemical databases. The dataset's preparation to build these models has a strong influence on the quality of the generated models, and sampling requires that the original dataset be divided into training (for model training) and test (for statistical evaluation) sets. This sampling can be done randomly or rationally, but the rational division is superior. In this paper, we present MASSA, a Python tool that can be used to automatically sample datasets by exploring the biological, physicochemical, and structural spaces of molecules using PCA, HCA, and K-modes. The proposed algorithm is very useful when the variables used for QSAR are not available or to construct multiple QSAR models with the same training and test sets, producing models with lower variability and better values for validation metrics. These results were obtained even when the descriptors used in the QSAR/QSPR were different from those used in the separation of training and test sets, indicating that this tool can be used to build models for more than one QSAR/QSPR technique. Finally, this tool also generates useful graphical representations that can provide insights into the data.

Predicting the Performance of Functional Materials Composed of Polymeric Multicomponent Systems Using Artificial Intelligence-Formulations of Cleansing Foams as an Example

Cleansing foam is a common multicomponent polymeric functional material. It contains ingredients in innumerable combinations, which makes formulation optimization challenging. In this study, we used artificial intelligence (AI) with machine learning to develop a cleansing capability prediction system that considers the effects of self-assembled structures and chemical properties of ingredients. Over 500 cleansing foam samples were prepared and tested. Molecular descriptors and Hansen solubility index were used to estimate the cleansing capabilities of each formulation set. We used five machine-learning models to predict the cleansing capability. In addition, we employed an in silico formulation by generating virtual formulations and predicting their cleansing capabilities using an established AI model. The achieved accuracy was R2 = 0.770. Our observations revealed that mixtures of cosmetic ingredients exhibit complex interactions, resulting in nonlinear behavior, which adds to the complexity of predicting cleansing performance. Nevertheless, accurate chemical property descriptors, along with the aid of in silico formulations, enabled the identification of potential ingredients. We anticipate that our system will efficiently predict the chemical properties of polymer-containing blends.

[Ensemble hologram quantitative structure activity relationship model of the chromatographic retention index of aldehydes and ketones]

Chromatographic retention index (RI) is an important parameter for describing the retention behavior of substances in chromatographic analysis. Experimentally determining the RI values of different aldehyde and ketone compounds in all kinds of polar stationary phases is expensive and time consuming. Quantitative structure activity relationship (QSAR) is an important chemometric technique that has been widely used to correlate the properties of chemicals to their molecular structures. Irrespective of whether the properties of a molecule have been experimentally determined, they can be calculated using QSAR models. It is therefore necessary and advisable to establish the QSAR model for predicting the RI value of aldehydes and ketones. Hologram QSAR (HQSAR) is a highly efficient QSAR approach that can easily generate QSAR models with good statistics and high prediction accuracy. A specific fragment of fingerprint, known as a molecular hologram, is proposed in the HQSAR approach and used as a structural descriptor to build the proposed QSAR model. In general, individual HQSAR models are built in QSAR researches. However, individual QSAR models are usually affected by underfitting and overfitting. The ensemble modeling method, which integrate several individual models through certain consensus strategies, can overcome the shortcomings of individual models. It is worth studying whether ensemble modeling can improve the prediction ability of the HQSAR method in order to build more accurate and reliable QSAR models. Therefore, this study investigates the QSAR model for chromatographic RI of aldehydes and ketones using ensemble modeling and the HQSAR method. Two individual HQSAR models comprising 34 compounds in two stationary phases, DB-210 and HP-Innowax, were established. The prediction ability of the two established models was assessed by external test set validation and leave-one-out cross validation (LOO-CV). The investigated 34 compounds were randomly assigned into two groups. Group Ⅰ comprised 26 compounds, and Group Ⅱ comprised 8 compounds. In the validation of the external test set, Group Ⅰ was employed to manually optimize the two fragment parameters (fragment distinction (FD) and fragment size (FS)) and build the HQSAR models. Group Ⅱ was used as the test set to assess the predictive performance of the developed models. For the DB-210 stationary phase, the optimal individual HQSAR model was obtained while setting the FD and FS to "donor/acceptor atoms (DA)" and 1-9, respectively. For the HP-Innowax stationary phase, the optimal individual HQSAR model was obtained by setting the FD and FS to "DA" and 4-7 respectively. The squared correlation coefficient of cross validation ( [Formula: see text] for predicting the RI values of the DB-210 and HP-Innowax stationary phases were 0.927 and 0.919, 0.956 and 0.979, 0.929 and 0.963, 0.927 and 0.958, and 0.935 and 0.963, respectively. Compared to the individual HQSAR models, the established ensemble HQSAR models show better robustness and accuracy, thus establishing that ensemble modeling is an effective approach. The combination of HQSAR and the ensemble modeling method is a practicable and promising method for studying and predicting the RI values of aldehydes and ketones.