Classification of macular and optic nerve disease by principal component analysis

Breast Cancer Detection with Reduced Feature Set

This paper explores feature reduction properties of independent component analysis (ICA) on breast cancer decision support system. Wisconsin diagnostic breast cancer (WDBC) dataset is reduced to one-dimensional feature vector computing an independent component (IC). The original data with 30 features and reduced one feature (IC) are used to evaluate diagnostic accuracy of the classifiers such as k-nearest neighbor (k-NN), artificial neural network (ANN), radial basis function neural network (RBFNN), and support vector machine (SVM). The comparison of the proposed classification using the IC with original feature set is also tested on different validation (5/10-fold cross-validations) and partitioning (20%–40%) methods. These classifiers are evaluated how to effectively categorize tumors as benign and malignant in terms of specificity, sensitivity, accuracy, F-score, Youden's index, discriminant power, and the receiver operating characteristic (ROC) curve with its criterion values including area under curve (AUC) and 95% confidential interval (CI). This represents an improvement in diagnostic decision support system, while reducing computational complexity.

Automatic detection of age-related macular degeneration pathologies in retinal fundus images

Advanced techniques in image processing and analysis are being extensively studied to assist clinical diagnoses. Digital colour retinal fundus images are widely utilised to investigate various eye diseases. In this paper, we describe the detection of optic disc (OD), macula and age-related macular degeneration (ARMD) pathologies of the macular regions in colour fundus images. ARMD causes the loss of central vision in older adults. If the disease is detected early and treated promptly, much of the vision loss can be prevented. Eighty colour retinal fundus images were tested using our proposed algorithm. The Hough transform was employed for OD determination. A fundus coordinate system was established based on the macula location. An ARMD pathology detection methodology using a subtraction process after contrast-limited adaptive histogram equalisation operations was proposed. The accuracies of the automated segmentations of the OD, macula and ARMD pathologies obtained were 100%, 100% and 95.49%, respectively. These results show that our algorithm is a useful tool for detecting ARMD in retinal fundus images. The application of our method may reduce the time needed by ophthalmologists to diagnose ARMD pathology while providing dependable detection precision. Integration of our technique into traditional software could be used in clinical implementations as an aid in disease diagnosis and as a tool for quantitative evaluation of treatment effectiveness.

Ensemble adaptive network-based fuzzy inference system with weighted arithmetical mean and application to diagnosis of optic nerve disease from visual-evoked potential signals

OBJECTIVE

This paper presents a new method based on combining principal component analysis (PCA) and adaptive network-based fuzzy inference system (ANFIS) to diagnose the optic nerve disease from visual-evoked potential (VEP) signals. The aim of this study is to improve the classification accuracy of ANFIS classifier on diagnosis of optic nerve disease from VEP signals. With this aim, a new classifier ensemble based on ANFIS and PCA is proposed.

METHODS AND MATERIAL

The VEP signals dataset include 61 healthy subjects and 68 patients suffered from optic nerve disease. First of all, the dimension of VEP signals dataset with 63 features has been reduced to 4 features using PCA. After applying PCA, ANFIS trained using three different training-testing datasets randomly with 50-50% training-testing partition.

RESULTS

The obtained classification results from ANFIS trained separately with three different training-testing datasets are 96.87%, 98.43%, and 98.43%, respectively. And then the results of ANFIS trained with three different training-testing datasets randomly with 50-50% training-testing partition have been combined with three different ways including weighted arithmetical mean that proposed firstly by us, arithmetical mean, and geometrical mean. The classification results of ANFIS combined with three different ways are 98.43%, 100%, and 100%, respectively. Also, ensemble ANFIS has been compared with ANN ensemble. ANN ensemble obtained 98.43%, 100%, and 100% prediction accuracy with three different ways including arithmetical mean, geometrical mean and weighted arithmetical mean.

CONCLUSION

These results have shown that the proposed classifier ensemble approach based on ANFIS trained with different train-test datasets and PCA has produced very promising results in the diagnosis of optic nerve disease from VEP signals.