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For: Sinnott MD, Cleary PW, Arkwright JW, Dinning PG. Investigating the relationships between peristaltic contraction and fluid transport in the human colon using Smoothed Particle Hydrodynamics. Comput Biol Med 2012;42:492-503. [PMID: 22297431 DOI: 10.1016/j.compbiomed.2012.01.002] [Citation(s) in RCA: 45] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2011] [Revised: 12/02/2011] [Accepted: 01/10/2012] [Indexed: 11/20/2022]
Number Cited by Other Article(s)
1
Swackhamer C, Bedane T, Keppler S, Poltorak A, Cheung K, Awais N, Marra F, Bornhorst GM. Development and analysis of a multi-module peristaltic simulator for gastrointestinal research. Food Res Int 2023;170:112877. [PMID: 37316038 DOI: 10.1016/j.foodres.2023.112877] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2022] [Revised: 03/06/2023] [Accepted: 04/20/2023] [Indexed: 06/16/2023]
2
Computational Simulation of Colorectal Cancer Biomarker Particle Mobility in a 3D Model. Molecules 2023;28:molecules28020589. [PMID: 36677649 PMCID: PMC9865637 DOI: 10.3390/molecules28020589] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2022] [Revised: 12/29/2022] [Accepted: 12/30/2022] [Indexed: 01/11/2023]  Open
3
Schütt M, O’Farrell C, Stamatopoulos K, Hoad CL, Marciani L, Sulaiman S, Simmons MJH, Batchelor HK, Alexiadis A. Simulating the Hydrodynamic Conditions of the Human Ascending Colon: A Digital Twin of the Dynamic Colon Model. Pharmaceutics 2022;14:pharmaceutics14010184. [PMID: 35057077 PMCID: PMC8778200 DOI: 10.3390/pharmaceutics14010184] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2021] [Revised: 12/26/2021] [Accepted: 01/11/2022] [Indexed: 12/21/2022]  Open
4
Costa M, Wiklendt L, Hibberd T, Dinning P, Spencer NJ, Brookes S. Analysis of Intestinal Movements with Spatiotemporal Maps: Beyond Anatomy and Physiology. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2022;1383:271-294. [PMID: 36587166 DOI: 10.1007/978-3-031-05843-1_26] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
5
Yang SY, Sencadas V, You SS, Jia NZX, Srinivasan SS, Huang HW, Ahmed AE, Liang JY, Traverso G. Powering Implantable and Ingestible Electronics. ADVANCED FUNCTIONAL MATERIALS 2021;31:2009289. [PMID: 34720792 PMCID: PMC8553224 DOI: 10.1002/adfm.202009289] [Citation(s) in RCA: 29] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/30/2020] [Indexed: 05/28/2023]
6
Bhatti MM, Zeeshan A, Bashir F, Sait SM, Ellahi R. Sinusoidal motion of small particles through a Darcy-Brinkman-Forchheimer microchannel filled with non-Newtonian fluid under electro-osmotic forces. JOURNAL OF TAIBAH UNIVERSITY FOR SCIENCE 2021. [DOI: 10.1080/16583655.2021.1991734] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
7
Luminal Fluid Motion Inside an In Vitro Dissolution Model of the Human Ascending Colon Assessed Using Magnetic Resonance Imaging. Pharmaceutics 2021;13:pharmaceutics13101545. [PMID: 34683837 PMCID: PMC8538555 DOI: 10.3390/pharmaceutics13101545] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2021] [Revised: 09/14/2021] [Accepted: 09/16/2021] [Indexed: 12/24/2022]  Open
8
Bhattarai A, Kowalczyk W, Tran TN. A literature review on large intestinal hyperelastic constitutive modeling. Clin Biomech (Bristol, Avon) 2021;88:105445. [PMID: 34416632 DOI: 10.1016/j.clinbiomech.2021.105445] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 12/03/2020] [Revised: 06/29/2021] [Accepted: 07/29/2021] [Indexed: 02/07/2023]
9
Alexiadis A, Simmons MJH, Stamatopoulos K, Batchelor HK, Moulitsas I. The virtual physiological human gets nerves! How to account for the action of the nervous system in multiphysics simulations of human organs. J R Soc Interface 2021;18:20201024. [PMID: 33849336 PMCID: PMC8086920 DOI: 10.1098/rsif.2020.1024] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]  Open
10
AVVARI RAVIKANT. EFFECTS OF STATIONARY CONTRACTION OF THE SMALL INTESTINE ON DIGESTION. J MECH MED BIOL 2021. [DOI: 10.1142/s0219519421500214] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
11
The role of circular folds in mixing intensification in the small intestine: A numerical study. Chem Eng Sci 2021. [DOI: 10.1016/j.ces.2020.116079] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
12
Dariel A, Grynberg L, Auger M, Lefèvre C, Durand T, Aubert P, Le Berre-Scoul C, Venara A, Suply E, Leclair MD, de Vries P, Levard G, Parmentier B, Podevin G, Schmitt F, Couvrat V, Irtan S, Hervieux E, Villemagne T, Lardy H, Capito C, Muller C, Sarnacki S, Mosnier JF, Galmiche L, Derkinderen P, Boudin H, Brochard C, Neunlist M. Analysis of enteric nervous system and intestinal epithelial barrier to predict complications in Hirschsprung's disease. Sci Rep 2020;10:21725. [PMID: 33303794 PMCID: PMC7729910 DOI: 10.1038/s41598-020-78340-z] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2020] [Accepted: 11/18/2020] [Indexed: 12/12/2022]  Open
13
Dynamic Colon Model (DCM): A Cine-MRI Informed Biorelevant In Vitro Model of the Human Proximal Large Intestine Characterized by Positron Imaging Techniques. Pharmaceutics 2020;12:pharmaceutics12070659. [PMID: 32668624 PMCID: PMC7407282 DOI: 10.3390/pharmaceutics12070659] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2020] [Revised: 07/09/2020] [Accepted: 07/10/2020] [Indexed: 12/17/2022]  Open
14
Shin YC, Shin W, Koh D, Wu A, Ambrosini YM, Min S, Eckhardt SG, Fleming RYD, Kim S, Park S, Koh H, Yoo TK, Kim HJ. Three-Dimensional Regeneration of Patient-Derived Intestinal Organoid Epithelium in a Physiodynamic Mucosal Interface-on-a-Chip. MICROMACHINES 2020;11:E663. [PMID: 32645991 PMCID: PMC7408321 DOI: 10.3390/mi11070663] [Citation(s) in RCA: 35] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/01/2020] [Revised: 07/03/2020] [Accepted: 07/05/2020] [Indexed: 12/29/2022]
15
Schütt M, Stamatopoulos K, Simmons MJH, Batchelor HK, Alexiadis A. Modelling and simulation of the hydrodynamics and mixing profiles in the human proximal colon using Discrete Multiphysics. Comput Biol Med 2020;121:103819. [PMID: 32568686 DOI: 10.1016/j.compbiomed.2020.103819] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2020] [Accepted: 05/10/2020] [Indexed: 12/20/2022]
16
Alexiadis A. Deep multiphysics: Coupling discrete multiphysics with machine learning to attain self-learning in-silico models replicating human physiology. Artif Intell Med 2019;98:27-34. [PMID: 31521250 DOI: 10.1016/j.artmed.2019.06.005] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2018] [Revised: 05/30/2019] [Accepted: 06/24/2019] [Indexed: 02/03/2023]
17
Bassotti G, Usai Satta P, Bellini M. Prucalopride for the treatment of constipation: a view from 2015 and beyond. Expert Rev Gastroenterol Hepatol 2019;13:257-262. [PMID: 30791758 DOI: 10.1080/17474124.2019.1568238] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
18
Mechanics of the stomach: A review of an emerging field of biomechanics. ACTA ACUST UNITED AC 2019. [DOI: 10.1002/gamm.201900001] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
19
Harrison SM, Cleary PW, Sinnott MD. Investigating mixing and emptying for aqueous liquid content from the stomach using a coupled biomechanical-SPH model. Food Funct 2018;9:3202-3219. [DOI: 10.1039/c7fo01226h] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
20
Ariane M, Allouche MH, Bussone M, Giacosa F, Bernard F, Barigou M, Alexiadis A. Discrete multi-physics: A mesh-free model of blood flow in flexible biological valve including solid aggregate formation. PLoS One 2017;12:e0174795. [PMID: 28384341 PMCID: PMC5383103 DOI: 10.1371/journal.pone.0174795] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2016] [Accepted: 03/15/2017] [Indexed: 11/23/2022]  Open
21
Alexiadis A, Stamatopoulos K, Wen W, Batchelor HK, Bakalis S, Barigou M, Simmons MJH. Using discrete multi-physics for detailed exploration of hydrodynamics in an in vitro colon system. Comput Biol Med 2017;81:188-198. [PMID: 28088672 DOI: 10.1016/j.compbiomed.2017.01.003] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2016] [Revised: 12/13/2016] [Accepted: 01/07/2017] [Indexed: 11/15/2022]
22
Stamatopoulos K, Batchelor HK, Simmons MJ. Dissolution profile of theophylline modified release tablets, using a biorelevant Dynamic Colon Model (DCM). Eur J Pharm Biopharm 2016;108:9-17. [DOI: 10.1016/j.ejpb.2016.08.004] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2016] [Revised: 07/13/2016] [Accepted: 08/08/2016] [Indexed: 01/06/2023]
23
Sjögren E, Thörn H, Tannergren C. In Silico Modeling of Gastrointestinal Drug Absorption: Predictive Performance of Three Physiologically Based Absorption Models. Mol Pharm 2016;13:1763-78. [PMID: 26926043 DOI: 10.1021/acs.molpharmaceut.5b00861] [Citation(s) in RCA: 52] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
24
Du P, Paskaranandavadivel N, Angeli TR, Cheng LK, O'Grady G. The virtual intestine: in silico modeling of small intestinal electrophysiology and motility and the applications. WILEY INTERDISCIPLINARY REVIEWS-SYSTEMS BIOLOGY AND MEDICINE 2015;8:69-85. [PMID: 26562482 DOI: 10.1002/wsbm.1324] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/10/2015] [Revised: 10/01/2015] [Accepted: 10/02/2015] [Indexed: 02/06/2023]
25
Harrison SM, Eyres G, Cleary PW, Sinnott MD, Delahunty C, Lundin L. Computational Modeling of Food Oral Breakdown Using Smoothed Particle Hydrodynamics. J Texture Stud 2014. [DOI: 10.1111/jtxs.12062] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
26
Wiklendt L, Costa M, Dinning PG. Inference of mechanical states of intestinal motor activity using hidden Markov models. BMC PHYSIOLOGY 2013;13:14. [PMID: 24330642 PMCID: PMC3909344 DOI: 10.1186/1472-6793-13-14] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/30/2013] [Accepted: 12/05/2013] [Indexed: 11/10/2022]
27
Cheng LK, Du P, O'Grady G. Mapping and modeling gastrointestinal bioelectricity: from engineering bench to bedside. Physiology (Bethesda) 2013;28:310-7. [PMID: 23997190 PMCID: PMC3768093 DOI: 10.1152/physiol.00022.2013] [Citation(s) in RCA: 49] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]  Open
28
Nguyen NQ, Holloway RH, Smout AJ, Omari TI. Automated impedance-manometry analysis detects esophageal motor dysfunction in patients who have non-obstructive dysphagia with normal manometry. Neurogastroenterol Motil 2013;25:238-45, e164. [PMID: 23113942 DOI: 10.1111/nmo.12040] [Citation(s) in RCA: 49] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
29
Arkwright JW, Dickson A, Maunder S, Blenman N, Lim J, O’Grady G, Archer R, Costa M, Spencer NJ, Brookes S, Pullan A, Dinning PG. The effect of luminal content and rate of occlusion on the interpretation of colonic manometry. Neurogastroenterol Motil 2013;25:e52-9. [PMID: 23228077 PMCID: PMC3539177 DOI: 10.1111/nmo.12051] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/08/2022]
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