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Chambellant F, Gaveau J, Papaxanthis C, Thomas E. Deactivation and collective phasic muscular tuning for pointing direction: Insights from machine learning. Heliyon 2024; 10:e33461. [PMID: 39050418 PMCID: PMC11268187 DOI: 10.1016/j.heliyon.2024.e33461] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2023] [Revised: 06/20/2024] [Accepted: 06/21/2024] [Indexed: 07/27/2024] Open
Abstract
Arm movements in our daily lives have to be adjusted for several factors in response to the demands of the environment, for example, speed, direction or distance. Previous research has shown that arm movement kinematics is optimally tuned to take advantage of gravity effects and minimize muscle effort in various pointing directions and gravity contexts. Here we build upon these results and focus on muscular adjustments. We used Machine Learning to analyze the ensemble activities of multiple muscles recorded during pointing in various directions. The advantage of such a technique would be the observation of patterns in collective muscular activity that may not be noticed using univariate statistics. By providing an index of multimuscle activity, the Machine Learning (ML) analysis brought to light several features of tuning for pointing direction. In attempting to trace tuning curves, all comparisons were done with respects to pointing in the horizontal, gravity free plane. We demonstrated that tuning for direction does not take place in a uniform fashion but in a modular manner in which some muscle groups play a primary role. The antigravity muscles were more finely tuned to pointing direction than the gravity muscles. Of note, was their tuning during the first half of downward pointing. As the antigravity muscles were deactivated during this phase, it supported the idea that deactivation is not an on-off function but is tuned to pointing direction. Further support for the tuning of the negative portions of the phasic EMG was provided by the observation of progressively improving classification accuracies with increasing angular distance from the horizontal. We also demonstrated that the durations of these negative phases, without information on their amplitudes, is tuned to pointing directions. Overall, these results show that the motor system tunes muscle commands to exploit gravity effects and reduce muscular effort. It quantitatively demonstrates that phasic EMG negativity is an essential feature of muscle control. The ML analysis was done using Linear Discriminant analysis (LDA) and Support Vector Machines (SVM). The two led to the same conclusions concerning the movements being investigated, hence showing that the former, computationally inexpensive technique is a viable tool for regular investigation of motor control.
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2
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Roggio F, Di Grande S, Cavalieri S, Falla D, Musumeci G. Biomechanical Posture Analysis in Healthy Adults with Machine Learning: Applicability and Reliability. SENSORS (BASEL, SWITZERLAND) 2024; 24:2929. [PMID: 38733035 PMCID: PMC11086111 DOI: 10.3390/s24092929] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/08/2024] [Revised: 04/30/2024] [Accepted: 05/02/2024] [Indexed: 05/13/2024]
Abstract
Posture analysis is important in musculoskeletal disorder prevention but relies on subjective assessment. This study investigates the applicability and reliability of a machine learning (ML) pose estimation model for the human posture assessment, while also exploring the underlying structure of the data through principal component and cluster analyses. A cohort of 200 healthy individuals with a mean age of 24.4 ± 4.2 years was photographed from the frontal, dorsal, and lateral views. We used Student's t-test and Cohen's effect size (d) to identify gender-specific postural differences and used the Intraclass Correlation Coefficient (ICC) to assess the reliability of this method. Our findings demonstrate distinct sex differences in shoulder adduction angle (men: 16.1° ± 1.9°, women: 14.1° ± 1.5°, d = 1.14) and hip adduction angle (men: 9.9° ± 2.2°, women: 6.7° ± 1.5°, d = 1.67), with no significant differences in horizontal inclinations. ICC analysis, with the highest value of 0.95, confirms the reliability of the approach. Principal component and clustering analyses revealed potential new patterns in postural analysis such as significant differences in shoulder-hip distance, highlighting the potential of unsupervised ML for objective posture analysis, offering a promising non-invasive method for rapid, reliable screening in physical therapy, ergonomics, and sports.
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Affiliation(s)
- Federico Roggio
- Department of Biomedical and Biotechnological Sciences, Section of Anatomy, Histology and Movement Science, School of Medicine, University of Catania, Via S. Sofia n°97, 95123 Catania, Italy;
| | - Sarah Di Grande
- Department of Electrical Electronic and Computer Engineering, University of Catania, Viale A. Doria 6, 95125 Catania, Italy; (S.D.G.); (S.C.)
| | - Salvatore Cavalieri
- Department of Electrical Electronic and Computer Engineering, University of Catania, Viale A. Doria 6, 95125 Catania, Italy; (S.D.G.); (S.C.)
| | - Deborah Falla
- Centre of Precision Rehabilitation for Spinal Pain (CPR Spine), School of Sport, Exercise and Rehabilitation Sciences, University of Birmingham, Birmingham B15 2TT, UK;
| | - Giuseppe Musumeci
- Department of Biomedical and Biotechnological Sciences, Section of Anatomy, Histology and Movement Science, School of Medicine, University of Catania, Via S. Sofia n°97, 95123 Catania, Italy;
- Research Center on Motor Activities (CRAM), University of Catania, Via S. Sofia n°97, 95123 Catania, Italy
- Department of Biology, Sbarro Institute for Cancer Research and Molecular Medicine, College of Science and Technology, Temple University, Philadelphia, PA 19122, USA
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3
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Lan Z, Lempereur M, Gueret G, Houx L, Cacioppo M, Pons C, Mensah J, Rémy-Néris O, Aïssa-El-Bey A, Rousseau F, Brochard S. Towards a diagnostic tool for neurological gait disorders in childhood combining 3D gait kinematics and deep learning. Comput Biol Med 2024; 171:108095. [PMID: 38350399 DOI: 10.1016/j.compbiomed.2024.108095] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2023] [Revised: 01/31/2024] [Accepted: 02/01/2024] [Indexed: 02/15/2024]
Abstract
Gait abnormalities are frequent in children and can be caused by different pathologies, such as cerebral palsy, neuromuscular disease, toe walker syndrome, etc. Analysis of the "gait pattern" (i.e., the way the person walks) using 3D analysis provides highly relevant clinical information. This information is used to guide therapeutic choices; however, it is underused in diagnostic processes, probably because of the lack of standardization of data collection methods. Therefore, 3D gait analysis is currently used as an assessment rather than a diagnostic tool. In this work, we aimed to determine if deep learning could be combined with 3D gait analysis data to diagnose gait disorders in children. We tested the diagnostic accuracy of deep learning methods combined with 3D gait analysis data from 371 children (148 with unilateral cerebral palsy, 60 with neuromuscular disease, 19 toe walkers, 60 with bilateral cerebral palsy, 25 stroke, and 59 typically developing children), with a total of 6400 gait cycles. We evaluated the accuracy, sensitivity, specificity, F1 score, Area Under the Curve (AUC) score, and confusion matrix of the predictions by ResNet, LSTM, and InceptionTime deep learning architectures for time series data. The deep learning-based models had good to excellent diagnostic accuracy (ranging from 0.77 to 0.99) for discrimination between healthy and pathological gait, discrimination between different etiologies of pathological gait (binary and multi-classification); and determining stroke onset time. LSTM performed best overall. This study revealed that the gait pattern contains specific, pathology-related information. These results open the way for an extension of 3D gait analysis from evaluation to diagnosis. Furthermore, the method we propose is a data-driven diagnostic model that can be trained and used without human intervention or expert knowledge. Furthermore, the method could be used to distinguish gait-related pathologies and their onset times beyond those studied in this research.
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Affiliation(s)
- Zhengyang Lan
- Laboratoire de Traitement de l'Information Médicale INSERM U1101, Brest, France; IMT Atlantique, LaTIM U1101 INSERM, Brest, France
| | - Mathieu Lempereur
- Laboratoire de Traitement de l'Information Médicale INSERM U1101, Brest, France; Université de Bretagne Occidentale, Brest, France; CHU de Brest, Hôpital Morvan, service de médecine physique et de réadaptation, Brest, France.
| | - Gwenael Gueret
- CHU de Brest, Hôpital Morvan, service de médecine physique et de réadaptation, Brest, France
| | - Laetitia Houx
- Laboratoire de Traitement de l'Information Médicale INSERM U1101, Brest, France; Université de Bretagne Occidentale, Brest, France; CHU de Brest, Hôpital Morvan, service de médecine physique et de réadaptation, Brest, France; Fondation Ildys, Brest, France
| | - Marine Cacioppo
- Laboratoire de Traitement de l'Information Médicale INSERM U1101, Brest, France; Université de Bretagne Occidentale, Brest, France; CHU de Brest, Hôpital Morvan, service de médecine physique et de réadaptation, Brest, France
| | - Christelle Pons
- Laboratoire de Traitement de l'Information Médicale INSERM U1101, Brest, France; Université de Bretagne Occidentale, Brest, France; CHU de Brest, Hôpital Morvan, service de médecine physique et de réadaptation, Brest, France; Fondation Ildys, Brest, France
| | - Johanne Mensah
- Laboratoire de Traitement de l'Information Médicale INSERM U1101, Brest, France; Université de Bretagne Occidentale, Brest, France; CHU de Brest, Hôpital Morvan, service de médecine physique et de réadaptation, Brest, France; Fondation Ildys, Brest, France
| | - Olivier Rémy-Néris
- Laboratoire de Traitement de l'Information Médicale INSERM U1101, Brest, France; Université de Bretagne Occidentale, Brest, France; CHU de Brest, Hôpital Morvan, service de médecine physique et de réadaptation, Brest, France
| | | | - François Rousseau
- Laboratoire de Traitement de l'Information Médicale INSERM U1101, Brest, France; IMT Atlantique, LaTIM U1101 INSERM, Brest, France
| | - Sylvain Brochard
- Laboratoire de Traitement de l'Information Médicale INSERM U1101, Brest, France; Université de Bretagne Occidentale, Brest, France; CHU de Brest, Hôpital Morvan, service de médecine physique et de réadaptation, Brest, France; Fondation Ildys, Brest, France
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4
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Dammeyer C, Nüesch C, Visscher RMS, Kim YK, Ismailidis P, Wittauer M, Stoffel K, Acklin Y, Egloff C, Netzer C, Mündermann A. Classification of inertial sensor-based gait patterns of orthopaedic conditions using machine learning: A pilot study. J Orthop Res 2024. [PMID: 38341759 DOI: 10.1002/jor.25797] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/10/2023] [Revised: 12/21/2023] [Accepted: 01/19/2024] [Indexed: 02/13/2024]
Abstract
Elderly patients often have more than one disease that affects walking behavior. An objective tool to identify which disease is the main cause of functional limitations may aid clinical decision making. Therefore, we investigated whether gait patterns could be used to identify degenerative diseases using machine learning. Data were extracted from a clinical database that included sagittal joint angles and spatiotemporal parameters measured using seven inertial sensors, and anthropometric data of patients with unilateral knee or hip osteoarthritis, lumbar or cervical spinal stenosis, and healthy controls. Various classification models were explored using the MATLAB Classification Learner app, and the optimizable Support Vector Machine was chosen as the best performing model. The accuracy of discrimination between healthy and pathologic gait was 82.3%, indicating that it is possible to distinguish pathological from healthy gait. The accuracy of discrimination between the different degenerative diseases was 51.4%, indicating the similarities in gait patterns between diseases need to be further explored. Overall, the differences between pathologic and healthy gait are distinct enough to classify using a classical machine learning model; however, routinely recorded gait characteristics and anthropometric data are not sufficient for successful discrimination of the degenerative diseases.
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Affiliation(s)
- Constanze Dammeyer
- Department of Orthopaedics and Traumatology, University Hospital Basel, Basel, Switzerland
- Department of Psychology and Sport Science, University of Bielefeld, Bielefeld, Germany
| | - Corina Nüesch
- Department of Orthopaedics and Traumatology, University Hospital Basel, Basel, Switzerland
- Department of Biomedical Engineering, University of Basel, Basel, Switzerland
- Department of Clinical Research, University of Basel, Basel, Switzerland
- Department of Spine Surgery, University Hospital Basel, Basel, Switzerland
| | - Rosa M S Visscher
- Department of Biomedical Engineering, University of Basel, Basel, Switzerland
- Institute for Biomechanics, ETH Zürich, Zürich, Switzerland
| | - Yong K Kim
- Institute for Biomechanics, ETH Zürich, Zürich, Switzerland
| | - Petros Ismailidis
- Department of Orthopaedics and Traumatology, University Hospital Basel, Basel, Switzerland
| | - Matthias Wittauer
- Department of Orthopaedics and Traumatology, University Hospital Basel, Basel, Switzerland
| | - Karl Stoffel
- Department of Orthopaedics and Traumatology, University Hospital Basel, Basel, Switzerland
| | - Yves Acklin
- Department of Orthopaedics and Traumatology, University Hospital Basel, Basel, Switzerland
| | - Christian Egloff
- Department of Orthopaedics and Traumatology, University Hospital Basel, Basel, Switzerland
| | - Cordula Netzer
- Department of Biomedical Engineering, University of Basel, Basel, Switzerland
- Department of Clinical Research, University of Basel, Basel, Switzerland
- Department of Spine Surgery, University Hospital Basel, Basel, Switzerland
| | - Annegret Mündermann
- Department of Orthopaedics and Traumatology, University Hospital Basel, Basel, Switzerland
- Department of Biomedical Engineering, University of Basel, Basel, Switzerland
- Department of Clinical Research, University of Basel, Basel, Switzerland
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5
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Steingrebe H, Spancken S, Sell S, Stein T. Effects of hip osteoarthritis on lower body joint kinematics during locomotion tasks: a systematic review and meta-analysis. Front Sports Act Living 2023; 5:1197883. [PMID: 38046934 PMCID: PMC10690786 DOI: 10.3389/fspor.2023.1197883] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2023] [Accepted: 10/09/2023] [Indexed: 12/05/2023] Open
Abstract
Introduction Motion analysis can be used to gain information needed for disease diagnosis as well as for the design and evaluation of intervention strategies in patients with hip osteoarthritis (HOA). Thereby, joint kinematics might be of great interest due to their discriminative capacity and accessibility, especially with regard to the growing usage of wearable sensors for motion analysis. So far, no comprehensive literature review on lower limb joint kinematics of patients with HOA exists. Thus, the aim of this systematic review and meta-analysis was to synthesise existing literature on lower body joint kinematics of persons with HOA compared to those of healthy controls during locomotion tasks. Methods Three databases were searched for studies on pelvis, hip, knee and ankle kinematics in subjects with HOA compared to healthy controls during locomotion tasks. Standardised mean differences were calculated and pooled using a random-effects model. Where possible, subgroup analyses were conducted. Risk of bias was assessed with the Downs and Black checklist. Results and Discussion A total of 47 reports from 35 individual studies were included in this review. Most studies analysed walking and only a few studies analysed stair walking or turning while walking. Most group differences were found in ipsi- and contralateral three-dimensional hip and sagittal knee angles with reduced ranges of motion in HOA subjects. Differences between subjects with mild to moderate and severe HOA were found, with larger effects in severe HOA subjects. Additionally, stair walking and turning while walking might be promising extensions in clinical gait analysis due to their elevated requirements for joint mobility. Large between-study heterogeneity was observed, and future studies have to clarify the effects of OA severity, laterality, age, gender, study design and movement execution on lower limb joint kinematics. Systematic Review Registration PROSPERO (CRD42021238237).
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Affiliation(s)
- Hannah Steingrebe
- BioMotion Center, Institute of Sports and Sports Science, Karlsruhe Institute of Technology (KIT), Karlsruhe, Germany
- Sports Orthopedics, Institute of Sports and Sports Science, Karlsruhe Institute of Technology (KIT), Karlsruhe, Germany
| | - Sina Spancken
- BioMotion Center, Institute of Sports and Sports Science, Karlsruhe Institute of Technology (KIT), Karlsruhe, Germany
| | - Stefan Sell
- Sports Orthopedics, Institute of Sports and Sports Science, Karlsruhe Institute of Technology (KIT), Karlsruhe, Germany
- Joint Center Black Forest, Hospital Neuenbürg, Neuenbürg, Germany
| | - Thorsten Stein
- BioMotion Center, Institute of Sports and Sports Science, Karlsruhe Institute of Technology (KIT), Karlsruhe, Germany
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6
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Thomas E, Ali FB, Tolambiya A, Chambellant F, Gaveau J. Too much information is no information: how machine learning and feature selection could help in understanding the motor control of pointing. Front Big Data 2023; 6:921355. [PMID: 37546547 PMCID: PMC10399757 DOI: 10.3389/fdata.2023.921355] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2022] [Accepted: 06/16/2023] [Indexed: 08/08/2023] Open
Abstract
The aim of this study was to develop the use of Machine Learning techniques as a means of multivariate analysis in studies of motor control. These studies generate a huge amount of data, the analysis of which continues to be largely univariate. We propose the use of machine learning classification and feature selection as a means of uncovering feature combinations that are altered between conditions. High dimensional electromyogram (EMG) vectors were generated as several arm and trunk muscles were recorded while subjects pointed at various angles above and below the gravity neutral horizontal plane. We used Linear Discriminant Analysis (LDA) to carry out binary classifications between the EMG vectors for pointing at a particular angle, vs. pointing at the gravity neutral direction. Classification success provided a composite index of muscular adjustments for various task constraints-in this case, pointing angles. In order to find the combination of features that were significantly altered between task conditions, we conducted a post classification feature selection i.e., investigated which combination of features had allowed for the classification. Feature selection was done by comparing the representations of each category created by LDA for the classification. In other words computing the difference between the representations of each class. We propose that this approach will help with comparing high dimensional EMG patterns in two ways; (i) quantifying the effects of the entire pattern rather than using single arbitrarily defined variables and (ii) identifying the parts of the patterns that convey the most information regarding the investigated effects.
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Affiliation(s)
- Elizabeth Thomas
- INSERMU1093, UFR STAPS, Université de Bourgogne Franche Comté, Dijon, France
| | - Ferid Ben Ali
- School of Engineering and Computer Science, University of Hertfordshire, Hatfield, United Kingdom
| | - Arvind Tolambiya
- Applied Intelligence Hub, Accenture Solutions Private Ltd., Hyderabad, Telangana, India
| | - Florian Chambellant
- INSERMU1093, UFR STAPS, Université de Bourgogne Franche Comté, Dijon, France
| | - Jérémie Gaveau
- INSERMU1093, UFR STAPS, Université de Bourgogne Franche Comté, Dijon, France
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7
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Dindorf C, Ludwig O, Simon S, Becker S, Fröhlich M. Machine Learning and Explainable Artificial Intelligence Using Counterfactual Explanations for Evaluating Posture Parameters. Bioengineering (Basel) 2023; 10:bioengineering10050511. [PMID: 37237581 DOI: 10.3390/bioengineering10050511] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2023] [Revised: 04/21/2023] [Accepted: 04/22/2023] [Indexed: 05/28/2023] Open
Abstract
Postural deficits such as hyperlordosis (hollow back) or hyperkyphosis (hunchback) are relevant health issues. Diagnoses depend on the experience of the examiner and are, therefore, often subjective and prone to errors. Machine learning (ML) methods in combination with explainable artificial intelligence (XAI) tools have proven useful for providing an objective, data-based orientation. However, only a few works have considered posture parameters, leaving the potential for more human-friendly XAI interpretations still untouched. Therefore, the present work proposes an objective, data-driven ML system for medical decision support that enables especially human-friendly interpretations using counterfactual explanations (CFs). The posture data for 1151 subjects were recorded by means of stereophotogrammetry. An expert-based classification of the subjects regarding the presence of hyperlordosis or hyperkyphosis was initially performed. Using a Gaussian progress classifier, the models were trained and interpreted using CFs. The label errors were flagged and re-evaluated using confident learning. Very good classification performances for both hyperlordosis and hyperkyphosis were found, whereby the re-evaluation and correction of the test labels led to a significant improvement (MPRAUC = 0.97). A statistical evaluation showed that the CFs seemed to be plausible, in general. In the context of personalized medicine, the present study's approach could be of importance for reducing diagnostic errors and thereby improving the individual adaptation of therapeutic measures. Likewise, it could be a basis for the development of apps for preventive posture assessment.
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Affiliation(s)
- Carlo Dindorf
- Department of Sport Science, Rheinland-Pfälzische Technische Universität Kaiserslautern-Landau (RPTU), 67663 Kaiserslautern, Germany
| | - Oliver Ludwig
- Department of Sport Science, Rheinland-Pfälzische Technische Universität Kaiserslautern-Landau (RPTU), 67663 Kaiserslautern, Germany
| | - Steven Simon
- Department of Sport Science, Rheinland-Pfälzische Technische Universität Kaiserslautern-Landau (RPTU), 67663 Kaiserslautern, Germany
| | - Stephan Becker
- Department of Sport Science, Rheinland-Pfälzische Technische Universität Kaiserslautern-Landau (RPTU), 67663 Kaiserslautern, Germany
| | - Michael Fröhlich
- Department of Sport Science, Rheinland-Pfälzische Technische Universität Kaiserslautern-Landau (RPTU), 67663 Kaiserslautern, Germany
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8
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Emmerzaal J, Van Rossom S, van der Straaten R, De Brabandere A, Corten K, De Baets L, Davis J, Jonkers I, Timmermans A, Vanwanseele B. Joint kinematics alone can distinguish hip or knee osteoarthritis patients from asymptomatic controls with high accuracy. J Orthop Res 2022; 40:2229-2239. [PMID: 35043466 DOI: 10.1002/jor.25269] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/30/2020] [Revised: 08/17/2021] [Accepted: 01/06/2022] [Indexed: 02/04/2023]
Abstract
Osteoarthritis (OA) is one of the leading musculoskeletal disabilities worldwide, and several interventions intend to change the gait pattern in OA patients to more healthy patterns. However, an accessible way to follow up the biomechanical changes in a clinical setting is still missing. Therefore, this study aims to evaluate whether we can use biomechanical data collected from a specific activity of daily living to help distinguish hip OA patients from controls and knee OA patients from controls using features that potentially could be measured in a clinical setting. To achieve this goal, we considered three different classes of statistical models with different levels of data complexity. Class 1 is kinematics based only (clinically applicable), class 2 includes joint kinetics (semi-applicable under the condition of access to a force plate or prediction models), and class 3 uses data from advanced musculoskeletal modeling (not clinically applicable). We used a machine learning pipeline to determine which classification model was best. We found 100% classification accuracy for KneeOA-vs-Asymptomatic and 93.9% for HipOA-vs-Asymptomatic using seven features derived from the lumbar spine and hip kinematics collected during ascending stairs. These results indicate that kinematical data alone can distinguish hip or knee OA patients from asymptomatic controls. However, to enable clinical use, we need to validate if the classifier also works with sensor-based kinematical data and whether the probabilistic outcome of the logistic regression model can be used in the follow-up of patients with OA.
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Affiliation(s)
- Jill Emmerzaal
- Human Movement Biomechanics Research Group, Department of Movement Sciences, KU Leuven, Belgium.,REVAL Rehabilitation Research Centre, Faculty of Rehabilitation Sciences, Hasselt University, Hasselt, Belgium
| | - Sam Van Rossom
- Human Movement Biomechanics Research Group, Department of Movement Sciences, KU Leuven, Belgium
| | - Rob van der Straaten
- REVAL Rehabilitation Research Centre, Faculty of Rehabilitation Sciences, Hasselt University, Hasselt, Belgium
| | - Arne De Brabandere
- Declarative Languages and Artificial Intelligence Group, Department of Computer Science, KU Leuven, Belgium
| | - Kristoff Corten
- Department of Orthopaedics, Ziekenhuis Oost Limburg, Genk, Belgium
| | - Liesbet De Baets
- Pain in Motion Research Group (PAIN), Department of Physiotherapy, Human Physiology and Anatomy, Vrije Universiteit Brussel, Ixelles, Belgium
| | - Jesse Davis
- Declarative Languages and Artificial Intelligence Group, Department of Computer Science, KU Leuven, Belgium
| | - Ilse Jonkers
- Human Movement Biomechanics Research Group, Department of Movement Sciences, KU Leuven, Belgium
| | - Annick Timmermans
- REVAL Rehabilitation Research Centre, Faculty of Rehabilitation Sciences, Hasselt University, Hasselt, Belgium
| | - Benedicte Vanwanseele
- Human Movement Biomechanics Research Group, Department of Movement Sciences, KU Leuven, Belgium
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9
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Bertaux A, Gueugnon M, Moissenet F, Orliac B, Martz P, Maillefert JF, Ornetti P, Laroche D. Gait analysis dataset of healthy volunteers and patients before and 6 months after total hip arthroplasty. Sci Data 2022; 9:399. [PMID: 35821499 PMCID: PMC9276684 DOI: 10.1038/s41597-022-01483-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2021] [Accepted: 06/16/2022] [Indexed: 11/09/2022] Open
Abstract
Clinical gait analysis is a promising approach for quantifying gait deviations and assessing the impairments altering gait in patients with osteoarthritis. There is a lack of consensus on the identification of kinematic outcomes that could be used for the diagnosis and follow up in patients. The proposed dataset has been established on 80 asymptomatic participants and 106 patients with unilateral hip osteoarthritis before and 6 months after arthroplasty. All volunteers walked along a 6 meters straight line at their self-selected speed. Three dimensional trajectories of 35 reflective markers were simultaneously recorded and Plugin Gait Bones, angles, Center of Mass trajectories and ground reaction forces were computed. Gait video recordings, when available, anthropometric and demographic descriptions are also available. A minimum of 10 trials have been made available in the weka file format and C3D file to enhance the use of machine learning algorithms. We aim to share this dataset to facilitate the identification of new movement-related kinematic outcomes for improving the diagnosis and follow up in patients with hip OA.
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Affiliation(s)
- Aurélie Bertaux
- CIAD UMR 7533, Univ. Bourgogne Franche-Comté, UB, F-21000, Dijon, France
| | - Mathieu Gueugnon
- INSERM, UMR1093-CAPS, Univ. Bourgogne Franche-Comté, UB, 21000, Dijon, France.,INSERM, CIC 1432, Module Plurithematique, Plateforme d'Investigation Technologique, 21000, Dijon, France.,CHU Dijon-Bourgogne, Centre d'Investigation Clinique, Module Plurithématique, Plateforme d'Investigation Technologique, 21000, Dijon, France
| | | | - Baptiste Orliac
- INSERM, CIC 1432, Module Plurithematique, Plateforme d'Investigation Technologique, 21000, Dijon, France.,CHU Dijon-Bourgogne, Centre d'Investigation Clinique, Module Plurithématique, Plateforme d'Investigation Technologique, 21000, Dijon, France
| | - Pierre Martz
- INSERM, UMR1093-CAPS, Univ. Bourgogne Franche-Comté, UB, 21000, Dijon, France.,INSERM, CIC 1432, Module Plurithematique, Plateforme d'Investigation Technologique, 21000, Dijon, France.,CHU Dijon-Bourgogne, Centre d'Investigation Clinique, Module Plurithématique, Plateforme d'Investigation Technologique, 21000, Dijon, France.,Orthopaedics department, CHU Dijon-Bourgogne, 21000, Dijon, France
| | - Jean-Francis Maillefert
- INSERM, UMR1093-CAPS, Univ. Bourgogne Franche-Comté, UB, 21000, Dijon, France.,Rheumatology department, CHU Dijon-Bourgogne, 21000, Dijon, France
| | - Paul Ornetti
- INSERM, UMR1093-CAPS, Univ. Bourgogne Franche-Comté, UB, 21000, Dijon, France.,INSERM, CIC 1432, Module Plurithematique, Plateforme d'Investigation Technologique, 21000, Dijon, France.,CHU Dijon-Bourgogne, Centre d'Investigation Clinique, Module Plurithématique, Plateforme d'Investigation Technologique, 21000, Dijon, France.,Rheumatology department, CHU Dijon-Bourgogne, 21000, Dijon, France
| | - Davy Laroche
- INSERM, UMR1093-CAPS, Univ. Bourgogne Franche-Comté, UB, 21000, Dijon, France. .,INSERM, CIC 1432, Module Plurithematique, Plateforme d'Investigation Technologique, 21000, Dijon, France. .,CHU Dijon-Bourgogne, Centre d'Investigation Clinique, Module Plurithématique, Plateforme d'Investigation Technologique, 21000, Dijon, France.
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10
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Can the Output of a Learned Classification Model Monitor a Person's Functional Recovery Status Post-Total Knee Arthroplasty? SENSORS 2022; 22:s22103698. [PMID: 35632107 PMCID: PMC9143351 DOI: 10.3390/s22103698] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/07/2022] [Revised: 05/05/2022] [Accepted: 05/09/2022] [Indexed: 02/06/2023]
Abstract
Osteoarthritis is a common musculoskeletal disorder. Classification models can discriminate an osteoarthritic gait pattern from that of control subjects. However, whether the output of learned models (probability of belonging to a class) is usable for monitoring a person’s functional recovery status post-total knee arthroplasty (TKA) is largely unexplored. The research question is two-fold: (I) Can a learned classification model’s output be used to monitor a person’s recovery status post-TKA? (II) Is the output related to patient-reported functioning? We constructed a logistic regression model based on (1) pre-operative IMU-data of level walking, ascending, and descending stairs and (2) 6-week post-operative data of walking, ascending-, and descending stairs. Trained models were deployed on subjects at three, six, and 12 months post-TKA. Patient-reported functioning was assessed by the KOOS-ADL section. We found that the model trained on 6-weeks post-TKA walking data showed a decrease in the probability of belonging to the TKA class over time, with moderate to strong correlations between the model’s output and patient-reported functioning. Thus, the LR-model’s output can be used as a screening tool to follow-up a person’s recovery status post-TKA. Person-specific relationships between the probabilities and patient-reported functioning show that the recovery process varies, favouring individual approaches in rehabilitation.
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11
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Teufl W, Taetz B, Miezal M, Dindorf C, Fröhlich M, Trinler U, Hogan A, Bleser G. Automated detection and explainability of pathological gait patterns using a one-class support vector machine trained on inertial measurement unit based gait data. Clin Biomech (Bristol, Avon) 2021; 89:105452. [PMID: 34481198 DOI: 10.1016/j.clinbiomech.2021.105452] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/10/2020] [Revised: 08/12/2021] [Accepted: 08/13/2021] [Indexed: 02/07/2023]
Abstract
BACKGROUND Machine learning approaches for the classification of pathological gait based on kinematic data, e.g. derived from inertial sensors, are commonly used in terms of a multi-class classification problem. However, there is a lack of research regarding one-class classifiers that are independent of certain pathologies. Therefore, it was the aim of this work to design a one-class classifier based on healthy norm-data that provides not only a prediction probability but rather an explanation of the classification decision, increasing the acceptance of this machine learning approach. METHODS The inertial sensor based gait kinematics of 25 healthy subjects was employed to train a one-class support vector machine. 25 healthy subjects, 20 patients after total hip arthroplasty and one transfemoral amputee served to validate the classifier. Prediction probabilities and feature importance scores were estimated for each subject. FINDINGS The support vector machine predicted 100% of the patients as outliers from the healthy group. Three healthy subjects were predicted as outliers. The feature importance calculation revealed the hip in the sagittal plane as most relevant feature concerning the group after total hip arthroplasty. For the misclassified healthy subject with the lowest probability score the knee flexion and the pelvis obliquity were identified. INTERPRETATION The support vector machine seems a useful tool to identify outliers from a healthy norm-group. The feature importance examination proved to provide valuable information on the musculoskeletal status of the subjects. In this combination, the present approach could be employed in various disciplines to identify abnormal gait and suggest subsequent training.
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Affiliation(s)
- Wolfgang Teufl
- University of Salzburg, Department of Sport Science, Schlossallee 49, 5400 Hallein, Austria.
| | - Bertram Taetz
- Technische Universität Kaiserslautern, Department of Computer Science, Gottlieb-Daimler-Straße 48, 67663 Kaiserslautern, Germany.
| | - Markus Miezal
- Technische Universität Kaiserslautern, Department of Computer Science, Gottlieb-Daimler-Straße 48, 67663 Kaiserslautern, Germany.
| | - Carlo Dindorf
- Technische Universität Kaiserslautern, Department of Sport Science, Erwin-Schrödinger-Straße 57, 67663 Kaiserslautern, Germany.
| | - Michael Fröhlich
- Technische Universität Kaiserslautern, Department of Sport Science, Erwin-Schrödinger-Straße 57, 67663 Kaiserslautern, Germany.
| | - Ursula Trinler
- BG Klinik Ludwigshafen, Ludwig-Guttmann-Straße 13, 67071 Ludwigshafen, Germany.
| | - Aidan Hogan
- BG Klinik Ludwigshafen, Ludwig-Guttmann-Straße 13, 67071 Ludwigshafen, Germany.
| | - Gabriele Bleser
- Technische Universität Kaiserslautern, Department of Computer Science, Gottlieb-Daimler-Straße 48, 67663 Kaiserslautern, Germany.
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12
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Dindorf C, Konradi J, Wolf C, Taetz B, Bleser G, Huthwelker J, Werthmann F, Bartaguiz E, Kniepert J, Drees P, Betz U, Fröhlich M. Classification and Automated Interpretation of Spinal Posture Data Using a Pathology-Independent Classifier and Explainable Artificial Intelligence (XAI). SENSORS (BASEL, SWITZERLAND) 2021; 21:6323. [PMID: 34577530 PMCID: PMC8470313 DOI: 10.3390/s21186323] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/02/2021] [Revised: 09/13/2021] [Accepted: 09/17/2021] [Indexed: 01/10/2023]
Abstract
Clinical classification models are mostly pathology-dependent and, thus, are only able to detect pathologies they have been trained for. Research is needed regarding pathology-independent classifiers and their interpretation. Hence, our aim is to develop a pathology-independent classifier that provides prediction probabilities and explanations of the classification decisions. Spinal posture data of healthy subjects and various pathologies (back pain, spinal fusion, osteoarthritis), as well as synthetic data, were used for modeling. A one-class support vector machine was used as a pathology-independent classifier. The outputs were transformed into a probability distribution according to Platt's method. Interpretation was performed using the explainable artificial intelligence tool Local Interpretable Model-Agnostic Explanations. The results were compared with those obtained by commonly used binary classification approaches. The best classification results were obtained for subjects with a spinal fusion. Subjects with back pain were especially challenging to distinguish from the healthy reference group. The proposed method proved useful for the interpretation of the predictions. No clear inferiority of the proposed approach compared to commonly used binary classifiers was demonstrated. The application of dynamic spinal data seems important for future works. The proposed approach could be useful to provide an objective orientation and to individually adapt and monitor therapy measures pre- and post-operatively.
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Affiliation(s)
- Carlo Dindorf
- Department of Sports Science, Technische Universität Kaiserslautern, 67663 Kaiserslautern, Germany; (E.B.); (M.F.)
| | - Jürgen Konradi
- Institute of Physical Therapy, Prevention and Rehabilitation, University Medical Centre, Johannes Gutenberg University Mainz, 55122 Mainz, Germany; (J.K.); (C.W.); (J.H.); (U.B.)
| | - Claudia Wolf
- Institute of Physical Therapy, Prevention and Rehabilitation, University Medical Centre, Johannes Gutenberg University Mainz, 55122 Mainz, Germany; (J.K.); (C.W.); (J.H.); (U.B.)
| | - Bertram Taetz
- Department Augmented Vision, German Research Center for Artificial Intelligence, 67663 Kaiserslautern, Germany; (B.T.); (G.B.)
| | - Gabriele Bleser
- Department Augmented Vision, German Research Center for Artificial Intelligence, 67663 Kaiserslautern, Germany; (B.T.); (G.B.)
| | - Janine Huthwelker
- Institute of Physical Therapy, Prevention and Rehabilitation, University Medical Centre, Johannes Gutenberg University Mainz, 55122 Mainz, Germany; (J.K.); (C.W.); (J.H.); (U.B.)
| | - Friederike Werthmann
- Department of Orthopedics and Trauma Surgery, University Medical Centre, Johannes Gutenberg University Mainz, 55122 Mainz, Germany; (F.W.); (J.K.); (P.D.)
| | - Eva Bartaguiz
- Department of Sports Science, Technische Universität Kaiserslautern, 67663 Kaiserslautern, Germany; (E.B.); (M.F.)
| | - Johanna Kniepert
- Department of Orthopedics and Trauma Surgery, University Medical Centre, Johannes Gutenberg University Mainz, 55122 Mainz, Germany; (F.W.); (J.K.); (P.D.)
| | - Philipp Drees
- Department of Orthopedics and Trauma Surgery, University Medical Centre, Johannes Gutenberg University Mainz, 55122 Mainz, Germany; (F.W.); (J.K.); (P.D.)
| | - Ulrich Betz
- Institute of Physical Therapy, Prevention and Rehabilitation, University Medical Centre, Johannes Gutenberg University Mainz, 55122 Mainz, Germany; (J.K.); (C.W.); (J.H.); (U.B.)
| | - Michael Fröhlich
- Department of Sports Science, Technische Universität Kaiserslautern, 67663 Kaiserslautern, Germany; (E.B.); (M.F.)
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13
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Mohan DM, Khandoker AH, Wasti SA, Ismail Ibrahim Ismail Alali S, Jelinek HF, Khalaf K. Assessment Methods of Post-stroke Gait: A Scoping Review of Technology-Driven Approaches to Gait Characterization and Analysis. Front Neurol 2021; 12:650024. [PMID: 34168608 PMCID: PMC8217618 DOI: 10.3389/fneur.2021.650024] [Citation(s) in RCA: 48] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2021] [Accepted: 05/07/2021] [Indexed: 12/26/2022] Open
Abstract
Background: Gait dysfunction or impairment is considered one of the most common and devastating physiological consequences of stroke, and achieving optimal gait is a key goal for stroke victims with gait disability along with their clinical teams. Many researchers have explored post stroke gait, including assessment tools and techniques, key gait parameters and significance on functional recovery, as well as data mining, modeling and analyses methods. Research Question: This study aimed to review and summarize research efforts applicable to quantification and analyses of post-stroke gait with focus on recent technology-driven gait characterization and analysis approaches, including the integration of smart low cost wearables and Artificial Intelligence (AI), as well as feasibility and potential value in clinical settings. Methods: A comprehensive literature search was conducted within Google Scholar, PubMed, and ScienceDirect using a set of keywords, including lower extremity, walking, post-stroke, and kinematics. Original articles that met the selection criteria were included. Results and Significance: This scoping review aimed to shed light on tools and technologies employed in post stroke gait assessment toward bridging the existing gap between the research and clinical communities. Conventional qualitative gait analysis, typically used in clinics is mainly based on observational gait and is hence subjective and largely impacted by the observer's experience. Quantitative gait analysis, however, provides measured parameters, with good accuracy and repeatability for the diagnosis and comparative assessment throughout rehabilitation. Rapidly emerging smart wearable technology and AI, including Machine Learning, Support Vector Machine, and Neural Network approaches, are increasingly commanding greater attention in gait research. Although their use in clinical settings are not yet well leveraged, these tools promise a paradigm shift in stroke gait quantification, as they provide means for acquiring, storing and analyzing multifactorial complex gait data, while capturing its non-linear dynamic variability and offering the invaluable benefits of predictive analytics.
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Affiliation(s)
- Dhanya Menoth Mohan
- Department of Biomedical Engineering, Health Engineering Innovation Center (HEIC), Khalifa University of Science and Technology, Abu Dhabi, United Arab Emirates
| | - Ahsan Habib Khandoker
- Department of Biomedical Engineering, Health Engineering Innovation Center (HEIC), Khalifa University of Science and Technology, Abu Dhabi, United Arab Emirates
| | - Sabahat Asim Wasti
- Neurological Institute, Cleveland Clinic Abu Dhabi, Abu Dhabi, United Arab Emirates
| | - Sarah Ismail Ibrahim Ismail Alali
- Department of Biomedical Engineering, Health Engineering Innovation Center (HEIC), Khalifa University of Science and Technology, Abu Dhabi, United Arab Emirates
| | - Herbert F Jelinek
- Department of Biomedical Engineering, Health Engineering Innovation Center (HEIC), Khalifa University of Science and Technology, Abu Dhabi, United Arab Emirates
| | - Kinda Khalaf
- Department of Biomedical Engineering, Health Engineering Innovation Center (HEIC), Khalifa University of Science and Technology, Abu Dhabi, United Arab Emirates
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14
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Feature extraction and gait classification in hip replacement patients on the basis of kinematic waveform data. BIOMEDICAL HUMAN KINETICS 2021. [DOI: 10.2478/bhk-2021-0022] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Abstract
Study aim: To find out, without relying on gait-specific assumptions or prior knowledge, which parameters are most important for the description of asymmetrical gait in patients after total hip arthroplasty (THA).
Material and methods: The gait of 22 patients after THA was recorded using an optical motion capture system. The waveform data of the marker positions, velocities, and accelerations, as well as joint and segment angles, were used as initial features. The random forest (RF) and minimum-redundancy maximum-relevance (mRMR) algorithms were chosen for feature selection. The results were compared with those obtained from the use of different dimensionality reduction methods.
Results: Hip movement in the sagittal plane, knee kinematics in the frontal and sagittal planes, marker position data of the anterior and posterior superior iliac spine, and acceleration data for markers placed at the proximal end of the fibula are highly important for classification (accuracy: 91.09%). With feature selection, better results were obtained compared to dimensionality reduction.
Conclusion: The proposed approaches can be used to identify and individually address abnormal gait patterns during the rehabilitation process via waveform data. The results indicate that position and acceleration data also provide significant information for this task.
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15
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Dindorf C, Teufl W, Taetz B, Bleser G, Fröhlich M. Interpretability of Input Representations for Gait Classification in Patients after Total Hip Arthroplasty. SENSORS (BASEL, SWITZERLAND) 2020; 20:E4385. [PMID: 32781583 PMCID: PMC7471970 DOI: 10.3390/s20164385] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/01/2020] [Revised: 08/04/2020] [Accepted: 08/04/2020] [Indexed: 01/31/2023]
Abstract
Many machine learning models show black box characteristics and, therefore, a lack of transparency, interpretability, and trustworthiness. This strongly limits their practical application in clinical contexts. For overcoming these limitations, Explainable Artificial Intelligence (XAI) has shown promising results. The current study examined the influence of different input representations on a trained model's accuracy, interpretability, as well as clinical relevancy using XAI methods. The gait of 27 healthy subjects and 20 subjects after total hip arthroplasty (THA) was recorded with an inertial measurement unit (IMU)-based system. Three different input representations were used for classification. Local Interpretable Model-Agnostic Explanations (LIME) was used for model interpretation. The best accuracy was achieved with automatically extracted features (mean accuracy Macc = 100%), followed by features based on simple descriptive statistics (Macc = 97.38%) and waveform data (Macc = 95.88%). Globally seen, sagittal movement of the hip, knee, and pelvis as well as transversal movement of the ankle were especially important for this specific classification task. The current work shows that the type of input representation crucially determines interpretability as well as clinical relevance. A combined approach using different forms of representations seems advantageous. The results might assist physicians and therapists finding and addressing individual pathologic gait patterns.
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Affiliation(s)
- Carlo Dindorf
- Department of Sports Science, Technische Universität Kaiserslautern, Erwin-Schrödinger-Str. 57, 67663 Kaiserslautern, Germany;
| | - Wolfgang Teufl
- Junior Research Group wearHEALTH, Technische Universität Kaiserslautern, Gottlieb-Daimler-Str. 48, 67663 Kaiserslautern, Germany; (W.T.); (B.T.); (G.B.)
| | - Bertram Taetz
- Junior Research Group wearHEALTH, Technische Universität Kaiserslautern, Gottlieb-Daimler-Str. 48, 67663 Kaiserslautern, Germany; (W.T.); (B.T.); (G.B.)
| | - Gabriele Bleser
- Junior Research Group wearHEALTH, Technische Universität Kaiserslautern, Gottlieb-Daimler-Str. 48, 67663 Kaiserslautern, Germany; (W.T.); (B.T.); (G.B.)
| | - Michael Fröhlich
- Department of Sports Science, Technische Universität Kaiserslautern, Erwin-Schrödinger-Str. 57, 67663 Kaiserslautern, Germany;
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16
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Burdack J, Horst F, Giesselbach S, Hassan I, Daffner S, Schöllhorn WI. Systematic Comparison of the Influence of Different Data Preprocessing Methods on the Performance of Gait Classifications Using Machine Learning. Front Bioeng Biotechnol 2020; 8:260. [PMID: 32351945 PMCID: PMC7174559 DOI: 10.3389/fbioe.2020.00260] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2019] [Accepted: 03/12/2020] [Indexed: 12/13/2022] Open
Abstract
Human movements are characterized by highly non-linear and multi-dimensional interactions within the motor system. Therefore, the future of human movement analysis requires procedures that enhance the classification of movement patterns into relevant groups and support practitioners in their decisions. In this regard, the use of data-driven techniques seems to be particularly suitable to generate classification models. Recently, an increasing emphasis on machine-learning applications has led to a significant contribution, e.g., in increasing the classification performance. In order to ensure the generalizability of the machine-learning models, different data preprocessing steps are usually carried out to process the measured raw data before the classifications. In the past, various methods have been used for each of these preprocessing steps. However, there are hardly any standard procedures or rather systematic comparisons of these different methods and their impact on the classification performance. Therefore, the aim of this analysis is to compare different combinations of commonly applied data preprocessing steps and test their effects on the classification performance of gait patterns. A publicly available dataset on intra-individual changes of gait patterns was used for this analysis. Forty-two healthy participants performed 6 sessions of 15 gait trials for 1 day. For each trial, two force plates recorded the three-dimensional ground reaction forces (GRFs). The data was preprocessed with the following steps: GRF filtering, time derivative, time normalization, data reduction, weight normalization and data scaling. Subsequently, combinations of all methods from each preprocessing step were analyzed by comparing their prediction performance in a six-session classification using Support Vector Machines, Random Forest Classifiers, Multi-Layer Perceptrons, and Convolutional Neural Networks. The results indicate that filtering GRF data and a supervised data reduction (e.g., using Principal Components Analysis) lead to increased prediction performance of the machine-learning classifiers. Interestingly, the weight normalization and the number of data points (above a certain minimum) in the time normalization does not have a substantial effect. In conclusion, the present results provide first domain-specific recommendations for commonly applied data preprocessing methods and might help to build more comparable and more robust classification models based on machine learning that are suitable for a practical application.
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Affiliation(s)
- Johannes Burdack
- Department of Training and Movement Science, Institute of Sport Science, Johannes Gutenberg-University, Mainz, Germany
| | - Fabian Horst
- Department of Training and Movement Science, Institute of Sport Science, Johannes Gutenberg-University, Mainz, Germany
| | - Sven Giesselbach
- Knowledge Discovery, Fraunhofer-Institute of Intelligent Analysis and Information Systems (IAIS), Sankt Augustin, Germany
- Competence Center Machine Learning Rhine-Ruhr (ML2R), Dortmund, Germany
| | - Ibrahim Hassan
- Department of Training and Movement Science, Institute of Sport Science, Johannes Gutenberg-University, Mainz, Germany
- Faculty of Physical Education, Zagazig University, Zagazig, Egypt
| | - Sabrina Daffner
- Qimoto, Doctors‘ Surgery for Sport Medicine and Orthopedics, Wiesbaden, Germany
| | - Wolfgang I. Schöllhorn
- Department of Training and Movement Science, Institute of Sport Science, Johannes Gutenberg-University, Mainz, Germany
- Department of Wushu, School of Martial Arts, Shanghai University of Sport, Shanghai, China
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17
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Towards an Inertial Sensor-Based Wearable Feedback System for Patients after Total Hip Arthroplasty: Validity and Applicability for Gait Classification with Gait Kinematics-Based Features. SENSORS 2019; 19:s19225006. [PMID: 31744141 PMCID: PMC6891461 DOI: 10.3390/s19225006] [Citation(s) in RCA: 34] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/24/2019] [Revised: 11/14/2019] [Accepted: 11/14/2019] [Indexed: 11/17/2022]
Abstract
Patients after total hip arthroplasty (THA) suffer from lingering musculoskeletal restrictions. Three-dimensional (3D) gait analysis in combination with machine-learning approaches is used to detect these impairments. In this work, features from the 3D gait kinematics, spatio temporal parameters (Set 1) and joint angles (Set 2), of an inertial sensor (IMU) system are proposed as an input for a support vector machine (SVM) model, to differentiate impaired and non-impaired gait. The features were divided into two subsets. The IMU-based features were validated against an optical motion capture (OMC) system by means of 20 patients after THA and a healthy control group of 24 subjects. Then the SVM model was trained on both subsets. The validation of the IMU system-based kinematic features revealed root mean squared errors in the joint kinematics from 0.24° to 1.25°. The validity of the spatio-temporal gait parameters (STP) revealed a similarly high accuracy. The SVM models based on IMU data showed an accuracy of 87.2% (Set 1) and 97.0% (Set 2). The current work presents valid IMU-based features, employed in an SVM model for the classification of the gait of patients after THA and a healthy control. The study reveals that the features of Set 2 are more significant concerning the classification problem. The present IMU system proves its potential to provide accurate features for the incorporation in a mobile gait-feedback system for patients after THA.
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18
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Halilaj E, Rajagopal A, Fiterau M, Hicks JL, Hastie TJ, Delp SL. Machine learning in human movement biomechanics: Best practices, common pitfalls, and new opportunities. J Biomech 2018; 81:1-11. [PMID: 30279002 DOI: 10.1016/j.jbiomech.2018.09.009] [Citation(s) in RCA: 189] [Impact Index Per Article: 31.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2018] [Accepted: 09/08/2018] [Indexed: 12/11/2022]
Abstract
Traditional laboratory experiments, rehabilitation clinics, and wearable sensors offer biomechanists a wealth of data on healthy and pathological movement. To harness the power of these data and make research more efficient, modern machine learning techniques are starting to complement traditional statistical tools. This survey summarizes the current usage of machine learning methods in human movement biomechanics and highlights best practices that will enable critical evaluation of the literature. We carried out a PubMed/Medline database search for original research articles that used machine learning to study movement biomechanics in patients with musculoskeletal and neuromuscular diseases. Most studies that met our inclusion criteria focused on classifying pathological movement, predicting risk of developing a disease, estimating the effect of an intervention, or automatically recognizing activities to facilitate out-of-clinic patient monitoring. We found that research studies build and evaluate models inconsistently, which motivated our discussion of best practices. We provide recommendations for training and evaluating machine learning models and discuss the potential of several underutilized approaches, such as deep learning, to generate new knowledge about human movement. We believe that cross-training biomechanists in data science and a cultural shift toward sharing of data and tools are essential to maximize the impact of biomechanics research.
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Affiliation(s)
- Eni Halilaj
- Department of Mechanical Engineering, Carnegie Mellon University, United States.
| | - Apoorva Rajagopal
- Department of Mechanical Engineering, Stanford University, United States
| | - Madalina Fiterau
- Department of Computer Science, Stanford University, United States
| | - Jennifer L Hicks
- Department of Bioengineering, Stanford University, United States
| | - Trevor J Hastie
- Department of Statistics, Stanford University, United States; Department of Health Research and Policy, Stanford University, United States
| | - Scott L Delp
- Department of Mechanical Engineering, Stanford University, United States; Department of Bioengineering, Stanford University, United States; Department of Orthopaedic Surgery, Stanford University, United States
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19
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Cabitza F, Locoro A, Banfi G. Machine Learning in Orthopedics: A Literature Review. Front Bioeng Biotechnol 2018; 6:75. [PMID: 29998104 PMCID: PMC6030383 DOI: 10.3389/fbioe.2018.00075] [Citation(s) in RCA: 119] [Impact Index Per Article: 19.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2018] [Accepted: 05/23/2018] [Indexed: 12/12/2022] Open
Abstract
In this paper we present the findings of a systematic literature review covering the articles published in the last two decades in which the authors described the application of a machine learning technique and method to an orthopedic problem or purpose. By searching both in the Scopus and Medline databases, we retrieved, screened and analyzed the content of 70 journal articles, and coded these resources following an iterative method within a Grounded Theory approach. We report the survey findings by outlining the articles' content in terms of the main machine learning techniques mentioned therein, the orthopedic application domains, the source data and the quality of their predictive performance.
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Affiliation(s)
- Federico Cabitza
- Dipartimento di Informatica, Sistemistica e Comunicazione, Universitá degli Studi di Milano-Bicocca, Milan, Italy
- IRCCS Istituto Ortopedico Galeazzi, Milan, Italy
| | | | - Giuseppe Banfi
- Dipartimento di Informatica, Sistemistica e Comunicazione, Universitá degli Studi di Milano-Bicocca, Milan, Italy
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20
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Cui C, Bian GB, Hou ZG, Zhao J, Su G, Zhou H, Peng L, Wang W. Simultaneous Recognition and Assessment of Post-Stroke Hemiparetic Gait by Fusing Kinematic, Kinetic, and Electrophysiological Data. IEEE Trans Neural Syst Rehabil Eng 2018; 26:856-864. [DOI: 10.1109/tnsre.2018.2811415] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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21
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Figueiredo J, Santos CP, Moreno JC. Automatic recognition of gait patterns in human motor disorders using machine learning: A review. Med Eng Phys 2018; 53:1-12. [PMID: 29373231 DOI: 10.1016/j.medengphy.2017.12.006] [Citation(s) in RCA: 68] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2017] [Revised: 10/10/2017] [Accepted: 12/24/2017] [Indexed: 10/18/2022]
Abstract
BACKGROUND automatic recognition of human movement is an effective strategy to assess abnormal gait patterns. Machine learning approaches are mainly applied due to their ability to work with multidimensional nonlinear features. PURPOSE to compare several machine learning algorithms employed for gait pattern recognition in motor disorders using discriminant features extracted from gait dynamics. Additionally, this work highlights procedures that improve gait recognition performance. METHODS we conducted an electronic literature search on Web of Science, IEEE, and Scopus, using "human recognition", "gait patterns'', and "feature selection methods" as relevant keywords. RESULTS analysis of the literature showed that kernel principal component analysis and genetic algorithms are efficient at reducing dimensional features due to their ability to process nonlinear data and converge to global optimum. Comparative analysis of machine learning performance showed that support vector machines (SVMs) exhibited higher accuracy and proper generalization for new instances. CONCLUSIONS automatic recognition by combining dimensional data reduction, cross-validation and normalization techniques with SVMs may offer an objective and rapid tool for investigating the subject's clinical status. Future directions comprise the real-time application of these tools to drive powered assistive devices in free-living conditions.
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Affiliation(s)
- Joana Figueiredo
- Center for MicroElectroMechnical Systems, University of Minho, Guimarães, Portugal.
| | - Cristina P Santos
- Center for MicroElectroMechnical Systems, University of Minho, Guimarães, Portugal.
| | - Juan C Moreno
- Neural Rehabilitation Group, Cajal Institute, Spanish National Research Council, Spain.
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Leigh RJ, Osis ST, Ferber R. Kinematic gait patterns and their relationship to pain in mild-to-moderate hip osteoarthritis. Clin Biomech (Bristol, Avon) 2016; 34:12-7. [PMID: 27031047 DOI: 10.1016/j.clinbiomech.2015.12.010] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/23/2015] [Revised: 12/22/2015] [Accepted: 12/23/2015] [Indexed: 02/07/2023]
Abstract
BACKGROUND Mild-to-moderate hip osteoarthritis is often managed clinically in a non-surgical manner. Effective non-surgical management of this population requires characterizing the specific impairments within this group. To date, a complete description of all lower extremity kinematics in mild-to-moderate hip osteoarthritis patients has not been presented. The aim of the present study is to describe the lower extremity gait kinematics in mild-to-moderate hip osteoarthritis patients and explore the relationship between kinematics and pain. METHODS 22 subjects with mild-to-moderate radiographic hip osteoarthritis (Kellgren-Lawrence grade 2-3) and 22 healthy age and BMI matched control subjects participated. Kinematic treadmill walking data were collected across all lower extremity joints. A two-way repeated measures analysis of variance estimated mean differences in gait kinematics between groups. Correlations between gait kinematics and pain were assessed using a Spearman correlation coefficient. FINDINGS Hip osteoarthritis subjects hiked their unsupported hemi-pelvis 1.40° (P<0.001) more than controls and tilted their pelvis 4.65° more anteriorly (P=0.01). Osteoarthritis subjects walked with 4.30° more peak hip abduction (P<0.001), 8.57° less peak hip extension (P<0.001), and 10.54° more peak hip external rotation (P<0.001). Kinematics were related to pain in the ankle frontal plane only (r=-0.43, P<0.05). INTERPRETATION Individuals with mild-to-moderate hip osteoarthritis demonstrate altered gait biomechanics not related to pain. These altered biomechanics may represent effective therapeutic targets by clinicians working with this population. Understanding the underlying patho-anatomic changes that lead to these biomechanical changes requires further investigation.
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Affiliation(s)
- Ryan J Leigh
- Faculty of Kinesiology, Running Injury Clinic, University of Calgary, 2500 University Dr. NW, Calgary, AB T2N 1N4, Canada.
| | - Sean T Osis
- Faculty of Kinesiology, Running Injury Clinic, University of Calgary, 2500 University Dr. NW, Calgary, AB T2N 1N4, Canada.
| | - Reed Ferber
- Faculty of Kinesiology, Running Injury Clinic, University of Calgary, 2500 University Dr. NW, Calgary, AB T2N 1N4, Canada; Faculty of Nursing, University of Calgary, 2500 University Dr. NW, Calgary, AB T2N 1N4, Canada.
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