Turning user generated health-related content into actionable knowledge through text analytics services

Disease- and Drug-Related Knowledge Extraction for Health Management from Online Health Communities Based on BERT-BiGRU-ATT

Knowledge extraction from rich text in online health communities can supplement and improve the existing knowledge base, supporting evidence-based medicine and clinical decision making. The extracted time series health management data of users can help users with similar conditions when managing their health. By annotating four relationships, this study constructed a deep learning model, BERT-BiGRU-ATT, to extract disease-medication relationships. A Chinese-pretrained BERT model was used to generate word embeddings for the question-and-answer data from online health communities in China. In addition, the bidirectional gated recurrent unit, combined with an attention mechanism, was employed to capture sequence context features and then to classify text related to diseases and drugs using a softmax classifier and to obtain the time series data provided by users. By using various word embedding training experiments and comparisons with classical models, the superiority of our model in relation to extraction was verified. Based on the knowledge extraction, the evolution of a user's disease progression was analyzed according to the time series data provided by users to further analyze the evolution of the user's disease progression. BERT word embedding, GRU, and attention mechanisms in our research play major roles in knowledge extraction. The knowledge extraction results obtained are expected to supplement and improve the existing knowledge base, assist doctors' diagnosis, and help users with dynamic lifecycle health management, such as user disease treatment management. In future studies, a co-reference resolution can be introduced to further improve the effect of extracting the relationships among diseases, drugs, and drug effects.

Automatic Diagnosis of Mental Healthcare Information Actionability: Developing Binary Classifiers

We aimed to develop a quantitative instrument to assist with the automatic evaluation of the actionability of mental healthcare information. We collected and classified two large sets of mental health information from certified mental health websites: generic and patient-specific mental healthcare information. We compared the performance of the optimised classifier with popular readability tools and non-optimised classifiers in predicting mental health information of high actionability for people with mental disorders. sensitivity of the classifier using both semantic and structural features as variables achieved statistically higher than that of the binary classifier using either semantic (p < 0.001) or structural features (p = 0.0010). The specificity of the optimized classifier was statistically higher than that of the classifier using structural variables (p = 0.002) and the classifier using semantic variables (p = 0.001). Differences in specificity between the full-variable classifier and the optimised classifier were statistically insignificant (p = 0.687). These findings suggest the optimised classifier using as few as 19 semantic-structural variables was the best-performing classifier. By combining insights of linguistics and statistical analyses, we effectively increased the interpretability and the diagnostic utility of the binary classifiers to guide the development, evaluation of the actionability and usability of mental healthcare information.

Are Health e-Mavens the New Patient Influencers?

Even though the healthcare industry is usually considered a rather traditional and slowly evolving sector, change is happening. Digitalization is transforming the way of obtaining medical advice and treatment and the Internet has become a key source for the seeking of healthcare information. It has allowed people to turn into more active collaborators in matters of their own health by enabling them to easily search and share information with other patients. Although research points out the growing importance of user-generated content in many sectors and its positive impact on information credibility, trust, engagement, and, ultimately, customer behavior (Malthouse et al., 2016), there is a lack of attention to this topic in healthcare. In this brief review, we address this gap by analyzing the role of health e-mavens, which are a particular type of influencers that possesses both expertise and online social influence. We lastly illustrate possible benefits of their impact on other to the different parties involved and affected by this phenomenon.

A Lightweight API-Based Approach for Building Flexible Clinical NLP Systems

Natural language processing (NLP) has become essential for secondary use of clinical data. Over the last two decades, many clinical NLP systems were developed in both academia and industry. However, nearly all existing systems are restricted to specific clinical settings mainly because they were developed for and tested with specific datasets, and they often fail to scale up. Therefore, using existing NLP systems for one's own clinical purposes requires substantial resources and long-term time commitments for customization and testing. Moreover, the maintenance is also troublesome and time-consuming. This research presents a lightweight approach for building clinical NLP systems with limited resources. Following the design science research approach, we propose a lightweight architecture which is designed to be composable, extensible, and configurable. It takes NLP as an external component which can be accessed independently and orchestrated in a pipeline via web APIs. To validate its feasibility, we developed a web-based prototype for clinical concept extraction with six well-known NLP APIs and evaluated it on three clinical datasets. In comparison with available benchmarks for the datasets, three high F1 scores (0.861, 0.724, and 0.805) were obtained from the evaluation. It also gained a low F1 score (0.373) on one of the tests, which probably is due to the small size of the test dataset. The development and evaluation of the prototype demonstrates that our approach has a great potential for building effective clinical NLP systems with limited resources.

Big Data's Role in Precision Public Health

Precision public health is an emerging practice to more granularly predict and understand public health risks and customize treatments for more specific and homogeneous subpopulations, often using new data, technologies, and methods. Big data is one element that has consistently helped to achieve these goals, through its ability to deliver to practitioners a volume and variety of structured or unstructured data not previously possible. Big data has enabled more widespread and specific research and trials of stratifying and segmenting populations at risk for a variety of health problems. Examples of success using big data are surveyed in surveillance and signal detection, predicting future risk, targeted interventions, and understanding disease. Using novel big data or big data approaches has risks that remain to be resolved. The continued growth in volume and variety of available data, decreased costs of data capture, and emerging computational methods mean big data success will likely be a required pillar of precision public health into the future. This review article aims to identify the precision public health use cases where big data has added value, identify classes of value that big data may bring, and outline the risks inherent in using big data in precision public health efforts.