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Bhikharee D, Rhyman L, Ramasami P. Computational study of the interaction of the psychoactive amphetamine with 1,2-indanedione and 1,8-diazafluoren-9-one as fingerprinting reagents. RSC Adv 2023; 13:4077-4088. [PMID: 36756547 PMCID: PMC9890558 DOI: 10.1039/d2ra07044h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2022] [Accepted: 01/11/2023] [Indexed: 01/31/2023] Open
Abstract
In this study, we used computational methods to investigate the interaction of amphetamine (AMP) with 1,2-indanedione (IND) and 1,8-diazafluoren-9-one (DFO) so as to understand whether AMP can be detected in latent fingerprints using either of these reagents. The results show that the binding energies of AMP with IND and DFO were enhanced by the presence of amino acid from -9.29 to -12.35 kcal mol-1 and -7.98 to -10.65 kcal mol-1, respectively. The physical origins of these interactions could be better understood by symmetry-adapted perturbation theory. The excited state properties of the binding structures with IND demonstrate distinguishable absorption peaks in the UV-vis spectra but zero fluorescence. Furthermore, the UV-vis spectra of the possible reaction products between AMP and the reagents reveal absorption peaks in the visible spectrum. Therefore, we could predict that reaction of AMP with IND would be observable by a reddish colour while with DFO, a colour change to violet is expected. To conclude, the reagents IND and DFO may be used to detect AMP by UV-vis spectroscopy and if their reactions are allowed, the reagents may then act as a potentially rapid, affordable and easy colorimetric test for AMP in latent fingerprints without destruction of the fingerprint sample.
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Affiliation(s)
- Divya Bhikharee
- Computational Chemistry Group, Department of Chemistry, Faculty of Science, University of Mauritius Réduit 80837 Mauritius
| | - Lydia Rhyman
- Computational Chemistry Group, Department of Chemistry, Faculty of Science, University of Mauritius Réduit 80837 Mauritius
| | - Ponnadurai Ramasami
- Computational Chemistry Group, Department of Chemistry, Faculty of Science, University of Mauritius Réduit 80837 Mauritius .,Department of Chemistry, University of South Africa Private Bag X6 Florida 1710 South Africa
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Armaković S, Mirjanić Đ, Pelemiš SS, Armaković SJ. Understanding interactions between graphene and local anesthetic molecules applied in dentistry – Towards the prolonged effects of local anesthesia. J Mol Liq 2022. [DOI: 10.1016/j.molliq.2022.120301] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/31/2022]
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İzzettinYILMAZER M. Theoretical Study of the Adsorption Mechanism of Ioversol Contrast Agent on the Single-Walled Carbon Nanotube Surface. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.134504] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Sheena Mary Y, Shyma Mary Y, Armaković S, Armaković SJ, Narayana B. Understanding reactivity of a triazole derivative and its interaction with graphene and doped/undoped-coronene—a DFT study. J Biomol Struct Dyn 2020; 40:2316-2326. [DOI: 10.1080/07391102.2020.1837677] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
- Y. Sheena Mary
- Department of Physics, Fatima Mata National College (Autonomous), Kollam, Kerala, India
| | - Y. Shyma Mary
- Department of Physics, Fatima Mata National College (Autonomous), Kollam, Kerala, India
| | - Stevan Armaković
- Department of Physics, Faculty of Sciences, University of Novi Sad, Novi Sad, Serbia
| | - Sanja J. Armaković
- Department of Chemistry, Biochemistry and Environmental Protection, Faculty of Sciences, University of Novi Sad, Novi Sad, Serbia
| | - B. Narayana
- Department of Studies in Chemistry, Mangalore University, Mangalagangothri, Karnataka, India
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Hiremath SM, Suvitha A, Patil NR, Hiremath CS, Khemalapure SS, Pattanayak SK, Negalurmath VS, Obelannavar K, Armaković SJ, Armaković S. Synthesis of 5-(5-methyl-benzofuran-3-ylmethyl)-3H- [1, 3, 4] oxadiazole-2-thione and investigation of its spectroscopic, reactivity, optoelectronic and drug likeness properties by combined computational and experimental approach. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2018; 205:95-110. [PMID: 30015034 DOI: 10.1016/j.saa.2018.07.003] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/24/2018] [Revised: 06/28/2018] [Accepted: 07/03/2018] [Indexed: 05/07/2023]
Abstract
This paper reports the synthesis of 5-(5-methyl-benzofuran-3-ylmethyl)-3H- [1, 3, 4] oxadiazole-2-thione (5MBOT) and characterization by FT-IR, FT-Raman, 1H NMR, 13C NMR and UV spectral studies. The density functional theory (DFT) calculations have been executed for the 5MBOT using B3LYP/6-31++G (d, p) basis set. The fundamental modes of the vibrations were designated by the potential energy distribution (PED), and the computed and experimental values support each other. The 1H NMR and 13C NMR chemical shifts of 5MBOT were estimated by gauge-including atomic orbitals (GIAO) method and compared with the experimental chemical shifts. The UV-Vis method used to study the visible absorption maxima (λmax) by using Time-Dependent DFT. Further, the Mulliken population analysis (MPA), natural population analysis (NPA) charges, thermodynamic properties at different temperatures were presented. The calculated HOMO and LUMO energies show that charge transfer within the molecule. The natural bonds orbital (NBO) also computed. Optoelectronic properties have been carried out by combination of DFT calculations and molecular dynamics (MD) simulations, in order to assess the potential of this structure for applications in organic electronics. Further, the study encompassed calculations of reorganization energies for holes and electrons and charge transfer rates. DFT calculations have been also used in order to identify locations possibly sensitive towards the autoxidation mechanism, which correlates between bond dissociation energy for hydrogen abstraction and the mechanism. The MD simulations have been used to understand interaction of 5MBOT with water molecules. Molecular docking studies reveals the antifungal activity of 5MBOT may be due to hydrogen bonding and hydrophobic interactions with different antifungal proteins.
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Affiliation(s)
- Sudhir M Hiremath
- Department of Physics, V.T.U. Regional Research Centre, Belagavi 590 018, Karnataka, India
| | - A Suvitha
- Department of Physics, C.M.R. Institute of Technology, Bangalore 560 037, Karnataka, India
| | - Ninganagouda R Patil
- Department of Physics, B.V.B. College of Engineering and Technology, Hubballi 580 031, Karnataka, India.
| | - Chidanandayya S Hiremath
- Department of Physics, S.K. Arts and H.S.K. Science Institute, Hubballi 580 031, Karnataka, India.
| | - Seema S Khemalapure
- Department of Physics, KLE Dr. M.S. Sheshagiri College of Engineering and Technology, Belagavi 590008, Karnataka, India
| | | | | | - Kotresh Obelannavar
- Department of Chemistry, Karnataka Science College, Dharwad 580 001, Karnataka, India
| | - Sanja J Armaković
- University of Novi Sad, Faculty of Sciences, Department of Chemistry, Biochemistry and Environmental Protection, Trg D. Obradovića 3, 21000 Novi Sad, Serbia
| | - Stevan Armaković
- University of Novi Sad, Faculty of Sciences, Department of Physics, Trg D. Obradovića 4, 21000 Novi Sad, Serbia
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