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For: Egli M, Johnson CH. A circadian clock nanomachine that runs without transcription or translation. Curr Opin Neurobiol 2013;23:732-40. [PMID: 23571120 DOI: 10.1016/j.conb.2013.02.012] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2013] [Revised: 02/21/2013] [Accepted: 02/23/2013] [Indexed: 11/15/2022]
Number Cited by Other Article(s)
1
Aviram R, Dandavate V, Manella G, Golik M, Asher G. Ultradian rhythms of AKT phosphorylation and gene expression emerge in the absence of the circadian clock components Per1 and Per2. PLoS Biol 2021;19:e3001492. [PMID: 34968386 PMCID: PMC8718012 DOI: 10.1371/journal.pbio.3001492] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2021] [Accepted: 11/23/2021] [Indexed: 12/26/2022]  Open
2
Barik S. Molecular Interactions between Pathogens and the Circadian Clock. Int J Mol Sci 2019;20:ijms20235824. [PMID: 31756974 PMCID: PMC6928883 DOI: 10.3390/ijms20235824] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2019] [Revised: 11/17/2019] [Accepted: 11/17/2019] [Indexed: 12/12/2022]  Open
3
Shi SQ, Johnson CH. Circadian biology and sleep in monogenic neurological disorders and its potential application in drug discovery. Curr Opin Behav Sci 2019;25:23-30. [PMID: 31289731 PMCID: PMC6615557 DOI: 10.1016/j.cobeha.2018.06.006] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
4
Mori T, Sugiyama S, Byrne M, Johnson CH, Uchihashi T, Ando T. Revealing circadian mechanisms of integration and resilience by visualizing clock proteins working in real time. Nat Commun 2018;9:3245. [PMID: 30108211 PMCID: PMC6092398 DOI: 10.1038/s41467-018-05438-4] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2018] [Accepted: 07/09/2018] [Indexed: 11/09/2022]  Open
5
Cordova JC, Olivares AO, Lang MJ. Mechanically Watching the ClpXP Proteolytic Machinery. Methods Mol Biol 2018;1486:317-341. [PMID: 27844434 DOI: 10.1007/978-1-4939-6421-5_12] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
6
Proposed Role for KaiC-Like ATPases as Major Signal Transduction Hubs in Archaea. mBio 2017;8:mBio.01959-17. [PMID: 29208747 PMCID: PMC5717392 DOI: 10.1128/mbio.01959-17] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]  Open
7
Egli M. Architecture and mechanism of the central gear in an ancient molecular timer. J R Soc Interface 2017;14:rsif.2016.1065. [PMID: 28330987 DOI: 10.1098/rsif.2016.1065] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2016] [Accepted: 02/27/2017] [Indexed: 12/16/2022]  Open
8
Snijder J, Schuller JM, Wiegard A, Lössl P, Schmelling N, Axmann IM, Plitzko JM, Förster F, Heck AJR. Structures of the cyanobacterial circadian oscillator frozen in a fully assembled state. Science 2017;355:1181-1184. [PMID: 28302852 DOI: 10.1126/science.aag3218] [Citation(s) in RCA: 69] [Impact Index Per Article: 9.9] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2016] [Accepted: 02/13/2017] [Indexed: 01/18/2023]
9
Chen Q, Yu L, Tan X, Liu S. Expression and Purification of Cyanobacterial Circadian Clock Protein KaiC and Determination of Its Auto-phosphatase Activity. Bio Protoc 2017;7:e2140. [PMID: 34458460 DOI: 10.21769/bioprotoc.2140] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2016] [Revised: 11/22/2016] [Accepted: 01/21/2017] [Indexed: 11/02/2022]  Open
10
Timing the day: what makes bacterial clocks tick? Nat Rev Microbiol 2017;15:232-242. [PMID: 28216658 DOI: 10.1038/nrmicro.2016.196] [Citation(s) in RCA: 69] [Impact Index Per Article: 9.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
11
Makarova KS, Koonin EV, Albers SV. Diversity and Evolution of Type IV pili Systems in Archaea. Front Microbiol 2016;7:667. [PMID: 27199977 PMCID: PMC4858521 DOI: 10.3389/fmicb.2016.00667] [Citation(s) in RCA: 73] [Impact Index Per Article: 9.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2016] [Accepted: 04/21/2016] [Indexed: 12/25/2022]  Open
12
Dong P, Fan Y, Sun J, Lv M, Yi M, Tan X, Liu S. A dynamic interaction process between KaiA and KaiC is critical to the cyanobacterial circadian oscillator. Sci Rep 2016;6:25129. [PMID: 27113386 PMCID: PMC4844972 DOI: 10.1038/srep25129] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2015] [Accepted: 04/12/2016] [Indexed: 11/09/2022]  Open
13
Ma P, Mori T, Zhao C, Thiel T, Johnson CH. Evolution of KaiC-Dependent Timekeepers: A Proto-circadian Timing Mechanism Confers Adaptive Fitness in the Purple Bacterium Rhodopseudomonas palustris. PLoS Genet 2016;12:e1005922. [PMID: 26982486 PMCID: PMC4794148 DOI: 10.1371/journal.pgen.1005922] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2015] [Accepted: 02/16/2016] [Indexed: 11/18/2022]  Open
14
Mori T, Mchaourab H, Johnson CH. Circadian Clocks: Unexpected Biochemical Cogs. Curr Biol 2016;25:R842-4. [PMID: 26439342 DOI: 10.1016/j.cub.2015.08.026] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
15
Pattanayek R, Egli M. Protein-Protein Interactions in the Cyanobacterial Circadian Clock: Structure of KaiA Dimer in Complex with C-Terminal KaiC Peptides at 2.8 Å Resolution. Biochemistry 2015. [PMID: 26200123 DOI: 10.1021/acs.biochem.5b00694] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
16
Gurevich L, Cohen-Luria R, Wagner N, Ashkenasy G. Robustness of synthetic circadian clocks to multiple environmental changes. Chem Commun (Camb) 2015;51:5672-5. [PMID: 25714790 DOI: 10.1039/c5cc00098j] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
17
Johnson CH, Egli M. Metabolic compensation and circadian resilience in prokaryotic cyanobacteria. Annu Rev Biochem 2015;83:221-47. [PMID: 24905782 DOI: 10.1146/annurev-biochem-060713-035632] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
18
Egli M, Johnson CH. Biochemistry that times the day. Biochemistry 2015;54:104-9. [PMID: 25514019 PMCID: PMC4303296 DOI: 10.1021/bi5014968] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2014] [Indexed: 01/11/2023]
19
Wagner N, Alasibi S, Peacock-Lopez E, Ashkenasy G. Coupled Oscillations and Circadian Rhythms in Molecular Replication Networks. J Phys Chem Lett 2015;6:60-65. [PMID: 26263092 DOI: 10.1021/jz502350u] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
20
Structural and biophysical methods to analyze clock function and mechanism. Methods Enzymol 2014;551:223-66. [PMID: 25662460 DOI: 10.1016/bs.mie.2014.10.004] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
21
Egli M. Intricate protein-protein interactions in the cyanobacterial circadian clock. J Biol Chem 2014;289:21267-75. [PMID: 24936066 DOI: 10.1074/jbc.r114.579607] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
22
Pattanayek R, Xu Y, Lamichhane A, Johnson CH, Egli M. An arginine tetrad as mediator of input-dependent and input-independent ATPases in the clock protein KaiC. ACTA CRYSTALLOGRAPHICA. SECTION D, BIOLOGICAL CRYSTALLOGRAPHY 2014;70:1375-90. [PMID: 24816106 PMCID: PMC4722857 DOI: 10.1107/s1399004714003228] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/20/2013] [Accepted: 02/12/2014] [Indexed: 11/10/2022]
23
Diversity of KaiC-based timing systems in marine Cyanobacteria. Mar Genomics 2014;14:3-16. [PMID: 24388874 DOI: 10.1016/j.margen.2013.12.006] [Citation(s) in RCA: 45] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2013] [Revised: 11/19/2013] [Accepted: 12/18/2013] [Indexed: 12/21/2022]
24
Villarreal SA, Pattanayek R, Williams DR, Mori T, Qin X, Johnson CH, Egli M, Stewart PL. CryoEM and molecular dynamics of the circadian KaiB-KaiC complex indicates that KaiB monomers interact with KaiC and block ATP binding clefts. J Mol Biol 2013;425:3311-24. [PMID: 23796516 PMCID: PMC3940072 DOI: 10.1016/j.jmb.2013.06.018] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2013] [Revised: 05/18/2013] [Accepted: 06/11/2013] [Indexed: 01/07/2023]
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