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Hulley EB, Clennan EL. Dihydrophenanthrene Open-Shell Singlet Diradicals and Their Roles in the Mallory Photocyclization Reaction. J Am Chem Soc 2024; 146:1122-1131. [PMID: 38163932 DOI: 10.1021/jacs.3c12400] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2024]
Abstract
A computational study (ωB97X-D/6-31G(d)) of the Mallory photocyclization reaction has revealed that the well-established dihydrophenanthrene (DHP) intermediates can adopt either closed-shell (CS) or open-shell-diradical (OS) singlet ground states. A detailed study of the properties of DHPs allowed their classifications as OS, borderline-OS, borderline-CS, or CS intermediates. The triplet electronic state and higher energy CS* isomer of all the OS singlet diradicals were computationally located, and the expected relationship between the diradical index, yo, and the triplet energy and the OS-CS* energy gaps was established. The importance of aromaticity in stabilizing the OS singlet diradicals was confirmed by using the Harmonic Oscillator Model of Aromaticity (HOMA). The thermal decompositions of DHPs by cycloreversions to regenerate the Mallory starting materials were also studied. The cycloreversion mechanism was described as a homolytic cleavage characterized by an anchimeric assistance continuum promoted by bis-β-homolytic cleavage.
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Affiliation(s)
- Elliott B Hulley
- Department of Chemistry, University of Wyoming, Laramie, Wyoming 82071, United States
| | - Edward L Clennan
- Department of Chemistry, University of Wyoming, Laramie, Wyoming 82071, United States
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Savchenko EV, Kostjukov VV. 4a,4b-Dihydrophenanthrene → cis-stilbene photoconversion: TD-DFT/DFT study. J Mol Model 2024; 30:24. [PMID: 38183494 DOI: 10.1007/s00894-023-05824-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2023] [Accepted: 12/28/2023] [Indexed: 01/08/2024]
Abstract
CONTEXT DHP → CS photoconversion was analyzed in terms of electron density redistribution for the first time. The following explanation for the non-recovery of the C4a-C4b bond upon CS relaxation is proposed: during this process, the Coulomb repulsion energy between these pairs of atoms increases by almost one and a half times, and their bonding by an electron at LUMO is insufficient to recover the C4a-C4b bond. According to calculations, upon CS relaxation, the linker connecting the benzene rings undergoes significant structural changes. In this case, the distance between the C4a and C4b atoms increases from 3.00 Å to 3.28 Å. Calculations showed that the C4a-C4b vibration of the DHP bond has a very low intensity. Therefore, thermal motion does not contribute to the rupture of this bond. METHODS All calculations were performed using the Gaussian16 software package at the B3LYP/6-311 + + G(d,p)/IEFPCM theory level. B3LYP was the only hybrid functional supported by Gaussian16, which ensured the cleavage of the C4a-C4b bond of DHP while optimizing its S1 excited state. A quantitative description of the redistribution of electron density in the studied conformers was carried out using the analysis of the NPA of atomic charges. Cyclohexane was used as an implicitly specified non-polar solvent. Visualization of molecular orbitals, and electron densities, as well as plotting of calculated IR spectra, were performed using the Gaussview6 software package.
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Affiliation(s)
- Elizaveta V Savchenko
- Sevastopol State University, Universitetskaya Str., 33, Sevastopol, 299053, Crimea, Ukraine
| | - Victor V Kostjukov
- Sevastopol State University, Universitetskaya Str., 33, Sevastopol, 299053, Crimea, Ukraine.
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Salazar E, Reinink S, Faraji S. Providing theoretical insight into the role of symmetry in the photoisomerization mechanism of a non-symmetric dithienylethene photoswitch. Phys Chem Chem Phys 2022; 24:11592-11602. [PMID: 35531648 PMCID: PMC9116444 DOI: 10.1039/d2cp00550f] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Dithienylethene (DTE) molecular photoswitches have shown to be excellent candidates in the design of efficient optoelectronic devices, due to their high photoisomerization quantum yield (QY), for which symmetry is suggested to play a crucial role. Here, we present a theoretical study on the photochemistry of a non-symmetric dithienylethene photoswitch, with a special emphasis on the effect of asymmetric substitution on the photocyclization and photoreversion mechanisms. We used the Spin-Flip Time Dependent Density Functional Theory (SF-TDDFT) method to locate and characterize the main structures (conical intersections and minima) of the ground state and the first two excited states, S1 and S2, along the ring-opening/closure reaction coordinate of the photocyclization and photoreversion processes, and to identify the important coordinates governing the radiationless decay pathways. Our results suggest that while the main features that characterize the photoisomerization of symmetric DTEs are also present for the photoisomerization of the non-symmetric DTE, the lower energy barrier on S1 along the cycloreversion reaction speaks in favor of a more efficient and therefore a higher cycloreversion QY for the non-symmetric DTEs, making them a better candidate for molecular optoelectronic devices than their symmetric counterparts.
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Affiliation(s)
- Edison Salazar
- Theoretical Chemistry, Zernike Institute for Advanced Materials, University of GroningenNijenborgh 49747 AG GroningenThe Netherlands
| | - Suzanne Reinink
- Theoretical Chemistry, Zernike Institute for Advanced Materials, University of GroningenNijenborgh 49747 AG GroningenThe Netherlands
| | - Shirin Faraji
- Theoretical Chemistry, Zernike Institute for Advanced Materials, University of GroningenNijenborgh 49747 AG GroningenThe Netherlands
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Fletcher K, Krämer M, Bunz UH, Dreuw A. The π-conjugation length determines the fluorescence quenching mechanism of aromatic aldehydes in water. Chem Phys 2018. [DOI: 10.1016/j.chemphys.2018.07.008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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Jean-Ruel H, Cooney RR, Gao M, Lu C, Kochman MA, Morrison CA, Miller RJD. Femtosecond dynamics of the ring closing process of diarylethene: a case study of electrocyclic reactions in photochromic single crystals. J Phys Chem A 2011; 115:13158-68. [PMID: 21939249 DOI: 10.1021/jp205818h] [Citation(s) in RCA: 77] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The cyclization reaction of the photochromic diarylethene derivative 1,2-bis(2,4-dimethyl-5-phenyl-3-thienyl)perfluorocyclopentene was studied in its single crystal phase with femtosecond transient absorption spectroscopy. The transient absorption measurements were performed with a robust acquisition scheme that explicitly exploits the photoreversibility of the molecular system and monitors the reversibility conditions. The crystalline system demonstrated 3 × 10(4) repeatable cycles before significant degradation was observed. Immediately following photoexcitation, the excited state absorption associated with the open-ring conformation undergoes a large spectral shift with a time constant of approximately 200 fs. Following this evolution on the excited state potential energy surface, the ring closure occurs with a time constant of 5.3 ps, which is significantly slower than previously reported measurements for similar derivatives in the solution phase. Time resolved electron diffraction studies were used to further demonstrate the assignment of the transient absorption dynamics to the ring closing reaction. The mechanistic details of the ring closing are discussed in the context of prior computational work along with a vibrational mode analysis using density functional theory to give some insight into the primary motions involved in the ring closing reaction.
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Affiliation(s)
- Hubert Jean-Ruel
- Department of Chemistry, University of Toronto, Toronto, Ontario, Canada
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Liu L, Yuan S, Fang WH, Zhang Y. Probing Highly Efficient Photoisomerization of a Bridged Azobenzene by a Combination of CASPT2//CASSCF Calculation with Semiclassical Dynamics Simulation. J Phys Chem A 2011; 115:10027-34. [DOI: 10.1021/jp203704x] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Affiliation(s)
- Lihong Liu
- College of Chemistry, Beijing Normal University, Beijing 100875, China
| | - Shuai Yuan
- College of Chemistry, Beijing Normal University, Beijing 100875, China
| | - Wei-Hai Fang
- College of Chemistry, Beijing Normal University, Beijing 100875, China
| | - Yong Zhang
- Department of Chemistry, Chemical Biology, Biomedical Engineering, Stevens Institute of Technology, Castle Point on the Hudson, Hoboken, New Jersey 07030, United States
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Bao J, Weber PM. Electronic effects on photochemistry: the diverse reaction dynamics of highly excited stilbenes and azobenzene. J Am Chem Soc 2011; 133:4164-7. [PMID: 21370862 DOI: 10.1021/ja108598w] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Ultrafast time-resolved mass spectrometry and structural dynamics experiments on trans-stilbene, cis-stilbene, and azobenzene, with excitation to high-lying electronic states, reveal a rich diversity of photochemical reaction dynamics. All processes are found to be quite unlike the well-known photochemistry on lower electronic surfaces. While in trans-stilbene, excitation at 6 eV induces a phenyl twisting motion, in cis-stilbene it leads to an ultrafast ring-closing to form 4a,4b-dihydrophenanthrene. Azobenzene dissociates on an ultrafast time scale, rather than isomerizing as it does on a lower surface. The photochemical dynamics of the sample molecules proceed along steep potential energy surfaces and conical intersections. Because of that, the dynamics are much faster than vibrational relaxation, the randomizing effects from vibrational energy scrambling are avoided, and excitation-energy specific reaction dynamics results.
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Affiliation(s)
- Jie Bao
- Department of Chemistry, Brown University, Providence, Rhode Island 02912, USA
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Jiang CW, Xie RH, Li FL, Allen RE. Comparative Studies of the trans−cis Photoisomerizations of Azobenzene and a Bridged Azobenzene. J Phys Chem A 2010; 115:244-9. [DOI: 10.1021/jp107991a] [Citation(s) in RCA: 45] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Chen-Wei Jiang
- Ministry of Education (MOE) Key Laboratory for Nonequilibrium Synthesis and Modulation of Condensed Matter, and Department of Applied Physics, Xi’an Jiaotong University, Xi’an 710049, China, Department of Physics, Texas A&M University, College Station, Texas 77843, United States, and Department of Physics, Hubei University, Wuhan 430062, China
| | - Rui-Hua Xie
- Ministry of Education (MOE) Key Laboratory for Nonequilibrium Synthesis and Modulation of Condensed Matter, and Department of Applied Physics, Xi’an Jiaotong University, Xi’an 710049, China, Department of Physics, Texas A&M University, College Station, Texas 77843, United States, and Department of Physics, Hubei University, Wuhan 430062, China
| | - Fu-Li Li
- Ministry of Education (MOE) Key Laboratory for Nonequilibrium Synthesis and Modulation of Condensed Matter, and Department of Applied Physics, Xi’an Jiaotong University, Xi’an 710049, China, Department of Physics, Texas A&M University, College Station, Texas 77843, United States, and Department of Physics, Hubei University, Wuhan 430062, China
| | - Roland E. Allen
- Ministry of Education (MOE) Key Laboratory for Nonequilibrium Synthesis and Modulation of Condensed Matter, and Department of Applied Physics, Xi’an Jiaotong University, Xi’an 710049, China, Department of Physics, Texas A&M University, College Station, Texas 77843, United States, and Department of Physics, Hubei University, Wuhan 430062, China
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Jan van der Molen S, Liljeroth P. Charge transport through molecular switches. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2010; 22:133001. [PMID: 21389503 DOI: 10.1088/0953-8984/22/13/133001] [Citation(s) in RCA: 134] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
We review the fascinating research on charge transport through switchable molecules. In the past decade, detailed investigations have been performed on a great variety of molecular switches, including mechanically interlocked switches (rotaxanes and catenanes), redox-active molecules and photochromic switches (e.g. azobenzenes and diarylethenes). To probe these molecules, both individually and in self-assembled monolayers (SAMs), a broad set of methods have been developed. These range from low temperature scanning tunneling microscopy (STM) via two-terminal break junctions to larger scale SAM-based devices. It is generally found that the electronic coupling between molecules and electrodes has a profound influence on the properties of such molecular junctions. For example, an intrinsically switchable molecule may lose its functionality after it is contacted. Vice versa, switchable two-terminal devices may be created using passive molecules ('extrinsic switching'). Developing a detailed understanding of the relation between coupling and switchability will be of key importance for both future research and technology.
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Jiang CW, Xie RH, Li FL, Allen RE. Photocyclization of trans-stilbene induced by an ultrafast laser pulse. Chem Phys Lett 2010. [DOI: 10.1016/j.cplett.2010.01.035] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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Jiang C, Xie R, Li F, Allen RE. Trans-to-cis isomerization of stilbene following an ultrafast laser pulse. Chem Phys Lett 2009. [DOI: 10.1016/j.cplett.2009.04.079] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Dynamic simulation study on ultrafast excited-state torsional dynamics of 9,9′-bianthryl (BA) in gas phase: Real-time observation of novel oscillation behavior with the torsional coordinate. Chem Phys Lett 2008. [DOI: 10.1016/j.cplett.2008.01.015] [Citation(s) in RCA: 56] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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13
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Zhao GJ, Han KL, Lei YB, Dou YS. Ultrafast excited-state dynamics of tetraphenylethylene studied by semiclassical simulation. J Chem Phys 2007; 127:094307. [PMID: 17824739 DOI: 10.1063/1.2768347] [Citation(s) in RCA: 69] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Detailed simulation study is reported for the excited-state dynamics of photoisomerization of cis-tetraphenylethylene (TPE) following excitation by a femtosecond laser pulse. The technique for this investigation is semiclassical dynamics simulation, which is described briefly in the paper. Upon photoexcitation by a femtosecond laser pulse, the stretching motion of the ethylenic bond of TPE is initially excited, leading to a significant lengthening of ethylenic bond in 300 fs. Twisting motion about the ethylenic bond is activated by the energy released from the relaxation of the stretching mode. The 90 degrees twisting about the ethylenic bond from an approximately planar geometry to nearly a perpendicular conformation in the electronically excited state is completed in 600 fs. The torsional dynamics of phenyl rings which is temporally lagging behind occurs at about 5 ps. Finally, the twisted TPE reverts to the initial conformation along the twisting coordinate through nonadiabatic transitions. The simulation results provide a basis for understanding several spectroscopic observations at molecular levels, including ultrafast dynamic Stokes shift, multicomponent fluorescence, viscosity dependence of the fluorescence lifetime, and radiationless decay from electronically excited state to the ground state along the isomerization coordinate.
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Affiliation(s)
- Guang-Jiu Zhao
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, People's Republic of China
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