Sr2+-neutral molecules interactions: An assessment of theoretical procedures

A RRKM study and a DFT assessment on gas-phase fragmentation of formamide-M(2+) (M = Ca, Sr)

A kinetic study of the unimolecular reactivity of formamide-M(2+) (M = Ca, Sr) systems was carried out by means of RRKM statistical theory using high-level DFT. The results predict M(2+), [M(NH2)](+) and [HCO](+) as the main products, together with an intermediate that could eventually evolve to produce [M(NH3)](2+) and CO, for high values of internal energy. In this framework, we also evaluated the influence of the external rotational energy on the reaction rate constants. In order to find a method to perform reliable electronic structure calculations for formamide-M(2+) (M = Ca, Sr) at a relatively low computational cost, an assessment of different methods was performed. In the first assessment twenty-one functionals, belonging to different DFT categories, and an MP2 wave function method using a small basis set were evaluated. CCSD(T)/cc-pWCVTZ single point calculations were used as reference. A second assessment has been performed on geometries and energies. We found BLYP/6-31G(d) and G96LYP/6-31+G(d,p) as the best performing methods, for formamide-Ca(2+) and formamide-Sr(2+), respectively. Furthermore, a detailed assessment was done on RRKM reactivity and G96LYP/6-31G(d) provided results in agreement with higher level calculations. The combination of geometrical, energetics and kinetics (RRKM) criteria to evaluate DFT functionals is rather unusual and provides an original assessment procedure. Overall, we suggest using G96LYP as the best performing functional with a small basis set for both systems.

Unimolecular reactivity of the [urea-Sr]2+ complex, a metastable dication in the gas phase: an experimental and theoretical perspective

The interactions between urea and Sr(2+) in the gas phase have been investigated by combining electrospray ionization/mass spectrometry techniques and density functional and high-level ab initio molecular orbital calculations. Our theoretical survey indicates that [Sr(urea)](2+) adducts are thermodynamically stable with respect to direct Coulomb explosions. However, after isomerization, some of the local minima of the PES are thermodynamically unstable with respect to the formation of NH(4)(+), but kinetically metastable. The loss of neutral fragments with the concomitant generation of lighter doubly charged fragment ions, namely, [(H(3)N)Sr](2+) and [(HNCO)]Sr(2+), compete with the aforementioned Coulomb explosion processes yielding NH(4)(+) + [(NCO)Sr](+) and [(H(2)N)Sr](+) + [H(2)NCO](+), although the former processes dominate. Hence, both singly and doubly charged species are detected as dissociation products. Quite importantly, the observed eliminations of NH(3) or HNCO lead to the formation of new doubly charged species, which turn out to be thermodynamically stable.

Modeling the interactions between peptide functions and Sr2+: formamide-Sr2+ reactions in the gas phase

The interactions between formamide, which can be considered a prototype of a peptide function, and Sr(2+) have been investigated by combining nanoelectrospray ionization/mass spectrometry techniques and G96LYP DFT calculations. For Sr an extended LANL2DZ basis set was employed, together with a 6-311+G(3df,2p) basis set expansion for the remaining atoms of the system. The observed reactivity seems to be dominated by the Coulomb explosion process yielding [SrOH](+) + [HNCH](+), which are the most intense peaks in the MS/MS spectra. Nevertheless, additional peaks corresponding to the loss of HNC and CO indicate that the association of Sr(2+) to water or to ammonia leads to long-lived doubly charged species detectable in the timescale of these experimental techniques. The topology of the calculated potential energy surface permits us to establish the mechanisms behind these processes. Although the interaction between the neutral base and Sr(2+) is essentially electrostatic, the polarization triggered by the doubly charged metal ion results in the activation of several bonds, and favors different proton transfer mechanisms required for the formation of the [SrOH](+), [SrOH(2)](2+) and [SrNH(3)](2+) products.