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Ma Y, Ishihara K, Yoshida K, Akiyama I, Yoshikawa K. Double-strand breaks in genome-sized DNA caused by megahertz ultrasound. THE JOURNAL OF THE ACOUSTICAL SOCIETY OF AMERICA 2021; 150:241. [PMID: 34340483 DOI: 10.1121/10.0005539] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/25/2021] [Accepted: 06/16/2021] [Indexed: 06/13/2023]
Abstract
Double-strand breaks (DSBs) of giant DNA molecules after exposure to 1.0 MHz pulsed-wave ultrasound were quantitatively evaluated by single-molecule observation of giant DNA (T4 GT7 DNA; 166 kbp) through fluorescence microscopy. Aqueous solutions of DNA were exposed to ultrasonic waves with different sound pressures, repetition periods (1, 2, 5 ms), and pulse durations (5, 10, 50 μs). Below a threshold value of sound pressure, almost no double-strand breaks were generated, and above the threshold, the degree of damage increased in an accelerated manner as the pressure increased. DNA damage was much more severe for exposure to ultrasound with a shorter pulse duration. In addition, a longer pulse repetition period caused worse damage in DNA molecules. The effect of microbubbles on the damage induced by exposure to ultrasound had also been studied. While a result showed that a very small amount of microbubbles increased DSBs of DNA, this effect of microbubbles only weakly depended on their concentrations.
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Affiliation(s)
- Yue Ma
- Faculty of Life and Medical Science, Doshisha University, Kyotanabe, 6100394, Japan
| | - Kazuya Ishihara
- Faculty of Science and Engineering, Doshisha University, Kyotanabe, 6100394, Japan
| | - Kenji Yoshida
- Center for Frontier Medical Engineering, Chiba University, Chiba, 2638522, Japan
| | - Iwaki Akiyama
- Faculty of Life and Medical Science, Doshisha University, Kyotanabe, 6100394, Japan
| | - Kenichi Yoshikawa
- Faculty of Life and Medical Science, Doshisha University, Kyotanabe, 6100394, Japan
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Noda M, Ma Y, Yoshikawa Y, Imanaka T, Mori T, Furuta M, Tsuruyama T, Yoshikawa K. A single-molecule assessment of the protective effect of DMSO against DNA double-strand breaks induced by photo-and γ-ray-irradiation, and freezing. Sci Rep 2017; 7:8557. [PMID: 28819291 PMCID: PMC5561226 DOI: 10.1038/s41598-017-08894-y] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2017] [Accepted: 07/14/2017] [Indexed: 11/09/2022] Open
Abstract
Dimethyl sulfoxide (DMSO) is widely used as a cryoprotectant for organs, tissues, and cell suspension in storage. In addition, DMSO is known to be a useful free radical scavenger and a radio-protectant. To date, many in vitro assays using cultured cells have been performed for analysing the protective effect of DMSO against genomic DNA damage; however, currently it has been rather difficult to detect DNA double strand breaks (DSBs) in a quantitative manner. In the present study, we aimed to observe the extent of DNA damage by use of single molecular observation with a fluorescence microscope to evaluate DSBs induced by photo- and γ-ray-irradiation, or freeze/thawing in variable concentrations of DMSO. As a result, we found that 2% DMSO conferred the maximum protective effect against all of the injury sources tested, and these effects were maintained at higher concentrations. Further, DMSO showed a significantly higher protective effect against freezing-induced damage than against photo- and γ-ray-irradiation-induced damage. Our study provides significant data for the optimization of DNA cryopreservation with DMSO, as well as for the usage of DNA as the protective agent against the injuries caused by active oxygen and radiations.
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Affiliation(s)
- Masami Noda
- Faculty of Life and Medical Sciences, Doshisha University, Kyoto, 610-0321, Japan
| | - Yue Ma
- Faculty of Life and Medical Sciences, Doshisha University, Kyoto, 610-0321, Japan
| | - Yuko Yoshikawa
- Faculty of Life and Medical Sciences, Doshisha University, Kyoto, 610-0321, Japan
| | - Tadayuki Imanaka
- Research Organization of Science and Technology, Ritsumeikan University, Shiga, 525-8577, Japan
| | - Toshiaki Mori
- Graduate School of Engineering, Department of Quantum and Radiation Technology, Osaka Prefecture University, Osaka, 599-8570, Japan
| | - Masakazu Furuta
- Graduate School of Engineering, Department of Quantum and Radiation Technology, Osaka Prefecture University, Osaka, 599-8570, Japan
| | - Tatsuaki Tsuruyama
- Drug Discovery and Medicine, Department of Pathology, Graduate School of Medicine, Kyoto University, Kyoto, 606-8501, Japan
| | - Kenichi Yoshikawa
- Faculty of Life and Medical Sciences, Doshisha University, Kyoto, 610-0321, Japan.
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Ma Y, Ogawa N, Yoshikawa Y, Mori T, Imanaka T, Watanabe Y, Yoshikawa K. Protective effect of ascorbic acid against double-strand breaks in giant DNA: Marked differences among the damage induced by photo-irradiation, gamma-rays and ultrasound. Chem Phys Lett 2015. [DOI: 10.1016/j.cplett.2015.08.054] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Yoshikawa Y, Mori T, Suzuki M, Imanaka T, Yoshikawa K. Comparative study of kinetics on DNA double-strand break induced by photo- and gamma-irradiation: Protective effect of water-soluble flavonoids. Chem Phys Lett 2010. [DOI: 10.1016/j.cplett.2010.11.003] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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