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Wang Y, Su P. Why Can Cationic Halogen Bond Donors Activate the Ritter-Type Solvolysis of Benzhydryl Bromide but Cationic Hydrogen Bond Donors Can Not? ACS OMEGA 2020; 5:21862-21872. [PMID: 32905280 PMCID: PMC7469379 DOI: 10.1021/acsomega.0c03000] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2020] [Accepted: 08/13/2020] [Indexed: 05/27/2023]
Abstract
It is found by experiment that the cationic halogen bond donors (cationic iodoimidazolium compounds) can activate the Ritter-type solvolysis of benzhydryl bromide, while the cationic hydrogen bond donors (cationic imidazolium compounds) could not. To understand the activation mechanism, various noncovalent interactions between benzhydryl bromide and a series of activators in solution, including halogen bond, hydrogen bond, lone pair···π/π+, and C-H···π/π+, were explored theoretically. Our study revealed that the activation difference can be contributed by the variation of the noncovalent interactions. For halogen bond donors, the successful activation is attributed by halogen bond and lone pair···π. The halogen bonds mainly provide the stabilization energy of the ion-pair complex with the help of lone pair···π. For hydrogen-bond donors, the contribution of the hydrogen bond is unable to compensate the like-charge repulsion arising from the generation of the carbocation, leading to the unsuccessful activation. In general, lone pair···π makes a difference.
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Affiliation(s)
- Yueyan Wang
- The State Key Laboratory
of Physical Chemistry of Solid Surfaces, Fujian Provincial Key Laboratory
of Theoretical and Computational Chemistry, and College of Chemistry
and Chemical Engineering, Xiamen University, Xiamen 361005, China
| | - Peifeng Su
- The State Key Laboratory
of Physical Chemistry of Solid Surfaces, Fujian Provincial Key Laboratory
of Theoretical and Computational Chemistry, and College of Chemistry
and Chemical Engineering, Xiamen University, Xiamen 361005, China
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Politzer P, Murray JS, Clark T. Explicit Inclusion of Polarizing Electric Fields in σ- and π-Hole Interactions. J Phys Chem A 2019; 123:10123-10130. [DOI: 10.1021/acs.jpca.9b08750] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Affiliation(s)
- Peter Politzer
- Department of Chemistry, University of New Orleans, New Orleans, Louisiana 70148, United States
| | - Jane S. Murray
- Department of Chemistry, University of New Orleans, New Orleans, Louisiana 70148, United States
| | - Timothy Clark
- Computer-Chemie-Centrum, Department of Chemistry and Pharmacy, Friedrich-Alexander-Universität Erlangen-Nürnberg, Nägelsbachstr. 25, 91052 Erlangen, Germany
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Oliveira V, Kraka E, Cremer D. The intrinsic strength of the halogen bond: electrostatic and covalent contributions described by coupled cluster theory. Phys Chem Chem Phys 2018; 18:33031-33046. [PMID: 27886325 DOI: 10.1039/c6cp06613e] [Citation(s) in RCA: 105] [Impact Index Per Article: 17.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
36 halogen-bonded complexes YXARm (X: F, Cl, Br; Y: donor group; ARm acceptor group) have been investigated at the CCSD(T)/aug-cc-pVTZ level of theory. Binding energies, geometries, NBO charges, charge transfer, dipole moments, electrostatic potential, electron and energy density distributions, difference density distributions, vibrational frequencies, local stretching and bending force constants, and relative bond strength orders n have been calculated and used to order the halogen bonds according to their intrinsic strength. Halogen bonding is found to arise from electrostatic and strong covalent contributions. It can be strengthened by H-bonding or lone pair delocalization. The covalent character of a halogen bond increases in the way 3c-4e (three-center-four-electron) bonding becomes possible. One can characterize halogen bonds by their percentage of 3c-4e bonding. FCl-phosphine complexes can form relatively strong halogen bonds provided electronegative substituents increase the covalent contributions in form of 3c-4e halogen bonding. Binding energies between 1 and 45 kcal mol-1 are calculated, which reflects the large variety in halogen bonding.
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Affiliation(s)
- Vytor Oliveira
- Computational and Theoretical Chemistry Group (CATCO), Department of Chemistry, Southern Methodist University, 3215 Daniel Ave, Dallas, Texas 75275-0314, USA.
| | - Elfi Kraka
- Computational and Theoretical Chemistry Group (CATCO), Department of Chemistry, Southern Methodist University, 3215 Daniel Ave, Dallas, Texas 75275-0314, USA.
| | - Dieter Cremer
- Computational and Theoretical Chemistry Group (CATCO), Department of Chemistry, Southern Methodist University, 3215 Daniel Ave, Dallas, Texas 75275-0314, USA.
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Shen D, Su P, Wu W. What kind of neutral halogen bonds can be modulated by solvent effects? Phys Chem Chem Phys 2018; 20:26126-26139. [DOI: 10.1039/c8cp05358h] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Abstract
Halogen bonds with a large portion of polarization can be modulated by solvent effects.
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Affiliation(s)
- Dan Shen
- The State Key Laboratory of Physical Chemistry of Solid Surfaces
- Fujian Provincial Key Laboratory of Theoretical and Computational Chemistry, and College of Chemistry and Chemical Engineering
- Xiamen University
- Xiamen
- China
| | - Peifeng Su
- The State Key Laboratory of Physical Chemistry of Solid Surfaces
- Fujian Provincial Key Laboratory of Theoretical and Computational Chemistry, and College of Chemistry and Chemical Engineering
- Xiamen University
- Xiamen
- China
| | - Wei Wu
- The State Key Laboratory of Physical Chemistry of Solid Surfaces
- Fujian Provincial Key Laboratory of Theoretical and Computational Chemistry, and College of Chemistry and Chemical Engineering
- Xiamen University
- Xiamen
- China
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Nunes R, Costa PJ. Ion-Pair Halogen Bonds in 2-Halo-Functionalized Imidazolium Chloride Receptors: Substituent and Solvent Effects. Chem Asian J 2017; 12:586-594. [PMID: 28052536 DOI: 10.1002/asia.201601690] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2016] [Revised: 01/02/2017] [Indexed: 01/14/2023]
Abstract
The interaction of 2-halo-functionalized imidazolium derivatives (n-X+ ; X=Cl, Br, I) with a chloride anion through ion-pair halogen bonds (n-X⋅Cl) was studied by means of DFT and ab initio calculations. A method benchmark was performed on 2-bromo-1H-imidazol-3-ium in association with chloride (1-Br⋅Cl); MP2 yielded the best results when compared with CCSD(T) calculations. The interaction energies (ΔE) in the gas phase are high and, although the electrostatic interaction is strong owing to the ion-pair nature of the system, large X⋅⋅⋅Cl- Wiberg bond orders and contributions from charge transfer (nCl- →σ*C-X) are obtained. These values drop considerably in chloroform and water; this shows that solvent plays a role in modulating the interaction and that gas-phase calculations are particularly unrealistic for experimental applications. The introduction of electron-withdrawing groups in the 4,5-positions of the imidazolium (e.g., -NO2 , -F) increases the halogen-bond strength in both the gas phase and solvent, including water. The effect of the substituents on the 1,3-positions (N-H groups) also depends on the solvent. The variation of ΔE can be predicted through a two-parameter linear regression that optimizes the weights of charge-transfer and electrostatic interactions, which are different in vacuum and in solvent (chloroform and water). These results could be used in the rational design of efficient chloride receptors based on halogen bonds that work in solution, in particular, in an aqueous environment.
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Affiliation(s)
- Rafael Nunes
- Centro de Química e Bioquímica, DQB, Faculdade de Ciências da Universidade de Lisboa, Campo Grande, 1749-016, Lisboa, Portugal
| | - Paulo J Costa
- Centro de Química e Bioquímica, DQB, Faculdade de Ciências da Universidade de Lisboa, Campo Grande, 1749-016, Lisboa, Portugal
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Oliveira V, Kraka E, Cremer D. Quantitative Assessment of Halogen Bonding Utilizing Vibrational Spectroscopy. Inorg Chem 2016; 56:488-502. [PMID: 27966937 DOI: 10.1021/acs.inorgchem.6b02358] [Citation(s) in RCA: 76] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
A total of 202 halogen-bonded complexes have been studied using a dual-level approach: ωB97XD/aug-cc-pVTZ was used to determine geometries, natural bond order charges, charge transfer, dipole moments, electron and energy density distributions, vibrational frequencies, local stretching force constants, and relative bond strength orders n. The accuracy of these calculations was checked for a subset of complexes at the CCSD(T)/aug-cc-pVTZ level of theory. Apart from this, all binding energies were verified at the CCSD(T) level. A total of 10 different electronic effects have been identified that contribute to halogen bonding and explain the variation in its intrinsic strength. Strong halogen bonds are found for systems with three-center-four-electron (3c-4e) bonding such as chlorine donors in interaction with substituted phosphines. If halogen bonding is supported by hydrogen bonding, genuine 3c-4e bonding can be realized. Perfluorinated diiodobenzenes form relatively strong halogen bonds with alkylamines as they gain stability due to increased electrostatic interactions.
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Affiliation(s)
- Vytor Oliveira
- Computational and Theoretical Chemistry Group, Department of Chemistry, Southern Methodist University (SMU) , 3215 Daniel Avenue, Dallas, Texas 75275-0314, United States
| | - Elfi Kraka
- Computational and Theoretical Chemistry Group, Department of Chemistry, Southern Methodist University (SMU) , 3215 Daniel Avenue, Dallas, Texas 75275-0314, United States
| | - Dieter Cremer
- Computational and Theoretical Chemistry Group, Department of Chemistry, Southern Methodist University (SMU) , 3215 Daniel Avenue, Dallas, Texas 75275-0314, United States
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Xu H, Cheng J, Li Q, Li W. Some measures for making a traditional halogen bond be chlorine-shared or ion-pair one in FCl•NH3 complex. Mol Phys 2016. [DOI: 10.1080/00268976.2016.1255798] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Huili Xu
- The Laboratory of Theoretical and Computational Chemistry, School of Chemistry and Chemical Engineering, Yantai University, Yantai, People's Republic of China
| | - Jianbo Cheng
- The Laboratory of Theoretical and Computational Chemistry, School of Chemistry and Chemical Engineering, Yantai University, Yantai, People's Republic of China
| | - Qingzhong Li
- The Laboratory of Theoretical and Computational Chemistry, School of Chemistry and Chemical Engineering, Yantai University, Yantai, People's Republic of China
| | - Wenzuo Li
- The Laboratory of Theoretical and Computational Chemistry, School of Chemistry and Chemical Engineering, Yantai University, Yantai, People's Republic of China
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Suponitsky KY, Burakov NI, Kanibolotsky AL, Mikhailov VA. Multiple Noncovalent Bonding in Halogen Complexes with Oxygen Organics. I. Tertiary Amides. J Phys Chem A 2016; 120:4179-90. [PMID: 27228362 DOI: 10.1021/acs.jpca.6b02192] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The present work describes the structure and binding of adducts of N,N'-diacetylpiperazine with halogens and interhalogens based on combination of different experimental methods and quantum chemical calculations. On the basis of conductometric and spectro-photometric experimental results, behavior of complexes in the acetonitrile solution was described. The iodine adduct with N,N'-diacetylpiperazine fully degrades into components. Adducts of interhalogens I-X (X = Cl or Br) with N,N'-diacetylpiperazine in acetonitrile partially dissociate to anionic [X-I-X](-) and cationic species. In the solid state, molecules are connected via C═O···I, C-H···I, and Cl···Cl attractive interactions. N,N'-diacetylpiperazine···dihalogen complex is stabilized by simultaneous C═O···I and C-H···I interactions. Such binding mode allows to explain the problems of the direct halogenation of acetyl-containing compounds with molecular halogens as reagents. We believe that the observed binding pattern can be used as prototypical for future design of halogeno complexes.
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Affiliation(s)
- Kyrill Yu Suponitsky
- X-ray Structural Centre, A.N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences , 28 Vavilov Street, Moscow 119991, Russia
| | - N I Burakov
- L. M. Litvinenko Institute of Physical Organic and Coal Chemistry , R. Luxemburg Street 70, 83114 Donetsk, Ukraine
| | - Alexander L Kanibolotsky
- L. M. Litvinenko Institute of Physical Organic and Coal Chemistry , R. Luxemburg Street 70, 83114 Donetsk, Ukraine.,WestCHEM, Department of Pure and Applied Chemistry, University of Strathclyde , 295 Cathedral Street, Glasgow G1 1XL, United Kingdom
| | - Vasilii A Mikhailov
- L. M. Litvinenko Institute of Physical Organic and Coal Chemistry , R. Luxemburg Street 70, 83114 Donetsk, Ukraine
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Gilday LC, Robinson SW, Barendt TA, Langton MJ, Mullaney BR, Beer PD. Halogen Bonding in Supramolecular Chemistry. Chem Rev 2015; 115:7118-95. [DOI: 10.1021/cr500674c] [Citation(s) in RCA: 913] [Impact Index Per Article: 101.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Lydia C. Gilday
- Chemistry Research Laboratory,
Department of Chemistry, University of Oxford, Mansfield Road, Oxford OX1 3TA, United Kingdom
| | - Sean W. Robinson
- Chemistry Research Laboratory,
Department of Chemistry, University of Oxford, Mansfield Road, Oxford OX1 3TA, United Kingdom
| | - Timothy A. Barendt
- Chemistry Research Laboratory,
Department of Chemistry, University of Oxford, Mansfield Road, Oxford OX1 3TA, United Kingdom
| | - Matthew J. Langton
- Chemistry Research Laboratory,
Department of Chemistry, University of Oxford, Mansfield Road, Oxford OX1 3TA, United Kingdom
| | - Benjamin R. Mullaney
- Chemistry Research Laboratory,
Department of Chemistry, University of Oxford, Mansfield Road, Oxford OX1 3TA, United Kingdom
| | - Paul D. Beer
- Chemistry Research Laboratory,
Department of Chemistry, University of Oxford, Mansfield Road, Oxford OX1 3TA, United Kingdom
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Alkorta I, Elguero J, Mó O, Yáñez M, Del Bene JE. Using beryllium bonds to change halogen bonds from traditional to chlorine-shared to ion-pair bonds. Phys Chem Chem Phys 2015; 17:2259-67. [DOI: 10.1039/c4cp04574b] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Dramatic synergistic cooperative effects between Be⋯F beryllium bonds and Cl⋯N halogen bonds in XYBe:FCl:N-base ternary complexes lead to changes in the halogen-bond type from traditional to chlorine-shared to ion-pair bonds.
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Affiliation(s)
- Ibon Alkorta
- Instituto de Química Médica (IQM-CSIC)
- 28006-Madrid
- Spain
| | - José Elguero
- Instituto de Química Médica (IQM-CSIC)
- 28006-Madrid
- Spain
| | - Otilia Mó
- Departamento de Química
- 28049 Madrid
- Spain
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Donoso-Tauda O, Jaque P, Elguero J, Alkorta I. Traditional and ion-pair halogen-bonded complexes between chlorine and bromine derivatives and a nitrogen-heterocyclic carbene. J Phys Chem A 2014; 118:9552-60. [PMID: 25188812 DOI: 10.1021/jp506663x] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
A theoretical study of the halogen-bonded complexes (A-X···C) formed between halogenated derivatives (A-X; A = F, Cl, Br, CN, CCH, CF3, CH3, H; and X = Cl, Br) and a nitrogen heterocyclic carbene, 1,3-dimethylimidazole-2-ylidene (MeIC) has been performed using MP2/aug'-cc-pVDZ level of theory. Two types of A-X:MeIC complexes, called here type-I and -II, were found and characterized. The first group is described by long C-X distances and small binding energies (8-54 kJ·mol(-1)). In general, these complexes show the traditional behavior of systems containing halogen-bonding interactions. The second type is characterized by short C-X distances and large binding energies (148-200 kJ·mol(-1)), and on the basis of the topological analysis of the electron density, they correspond to ion-pair halogen-bonded complexes. These complexes can be seen as the interaction between two charged fragments: A(-) and (+)[X-CIMe] with a high electrostatic contribution in the binding energy. The charge transfer between lone pair A(LP) to the σ* orbital of C-X bond is also identified as a significant stabilizing interaction in type-II complexes.
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Affiliation(s)
- Oscar Donoso-Tauda
- Departamento de Ciencias Químicas, Facultad de Ciencias Exactas, Universidad Andres Bello , Av. Republica 275, Santiago, Chile
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Donald KJ, Tawfik M. The Weak Helps the Strong: Sigma-Holes and the Stability of MF4·Base Complexes. J Phys Chem A 2013; 117:14176-83. [DOI: 10.1021/jp407657d] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Affiliation(s)
- Kelling J. Donald
- Department of
Chemistry, Gottwald Center for the Sciences, University of Richmond, Richmond, Virginia 23173, United States
| | - Marina Tawfik
- Department of
Chemistry, Gottwald Center for the Sciences, University of Richmond, Richmond, Virginia 23173, United States
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Politzer P, Murray JS. Halogen Bonding: An Interim Discussion. Chemphyschem 2013; 14:278-94. [DOI: 10.1002/cphc.201200799] [Citation(s) in RCA: 578] [Impact Index Per Article: 52.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2012] [Indexed: 11/10/2022]
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Politzer P, Murray JS, Clark T. Halogen bonding and other σ-hole interactions: a perspective. Phys Chem Chem Phys 2013; 15:11178-89. [DOI: 10.1039/c3cp00054k] [Citation(s) in RCA: 1221] [Impact Index Per Article: 111.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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McDowell SAC, Joseph JA. Cooperative effects of noncovalent bonds to the Br atom of halogen-bonded H3N…BrZ and HCN…BrZ (Z = F, Br) complexes. J Chem Phys 2012; 137:074310. [DOI: 10.1063/1.4745838] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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Ban Q, Li R, Li Q, Li W, Cheng J. Symmetry-adapted perturbation theory interaction energy decomposition for H2CY-XF (Y=O, S, Se; X=H, Li, Cl) complex. COMPUT THEOR CHEM 2012. [DOI: 10.1016/j.comptc.2012.04.002] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Alkorta I, Sanchez-Sanz G, Elguero J, Del Bene JE. FCl:PCX Complexes: Old and New Types of Halogen Bonds. J Phys Chem A 2012; 116:2300-8. [DOI: 10.1021/jp211451y] [Citation(s) in RCA: 46] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Affiliation(s)
- Ibon Alkorta
- Instituto de Química Médica (CSIC), Juan de la Cierva, 3, 28006 Madrid, Spain
| | - Goar Sanchez-Sanz
- Instituto de Química Médica (CSIC), Juan de la Cierva, 3, 28006 Madrid, Spain
| | - José Elguero
- Instituto de Química Médica (CSIC), Juan de la Cierva, 3, 28006 Madrid, Spain
| | - Janet E. Del Bene
- Department
of Chemistry, Youngstown State University, Youngstown, Ohio 44555, United States
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Halogen bonding and beyond: factors influencing the nature of CN–R and SiN–R complexes with F–Cl and Cl2. Theor Chem Acc 2012. [DOI: 10.1007/s00214-012-1114-1] [Citation(s) in RCA: 98] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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McAllister LJ, Bruce DW, Karadakov PB. Halogen Bonding Interaction between Fluorohalides and Isocyanides. J Phys Chem A 2011; 115:11079-86. [DOI: 10.1021/jp207119c] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Linda J. McAllister
- Department of Chemistry, University of York, Heslington, York, YO10 5DD, U.K
| | - Duncan W. Bruce
- Department of Chemistry, University of York, Heslington, York, YO10 5DD, U.K
| | - Peter B. Karadakov
- Department of Chemistry, University of York, Heslington, York, YO10 5DD, U.K
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Del Bene JE, Alkorta I, Sanchez-Sanz G, Elguero J. 31P–31P spin–spin coupling constants for pnicogen homodimers. Chem Phys Lett 2011. [DOI: 10.1016/j.cplett.2011.07.043] [Citation(s) in RCA: 126] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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