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Taylor AE, Hering M, Elsegood MRJ, Teat SJ, Weaver GW, Arroo RRJ, Kaiser M, Maeser P, Bhambra AS. Novel 4-[4-(4-methylpiperazin-1-yl)phenyl]-6-arylpyrimidine derivatives and their antitrypanosomal activities against T.brucei. Bioorg Med Chem Lett 2024; 109:129825. [PMID: 38823730 DOI: 10.1016/j.bmcl.2024.129825] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2024] [Revised: 05/13/2024] [Accepted: 05/29/2024] [Indexed: 06/03/2024]
Abstract
Human African trypanosomiasis, or sleeping sickness, is a neglected tropical disease caused by Trypanosoma brucei rhodesiense and Trypanosoma brucei gambiense and is invariably fatal unless treated. Current therapies present limitations in their application, parasite resistance, or require further clinical investigation for wider use. Our work, informed by previous findings, presents novel 4-[4-(4-methylpiperazin-1-yl)phenyl]-6-arylpyrimidine derivatives with promising antitrypanosomal activity. In particular, 32 exhibits an in vitro EC50 value of 0.5 µM against Trypanosoma brucei rhodesiense, and analogues 29, 30 and 33 show antitrypanosomal activities in the <1 µM range. We have demonstrated that substituted 4-[4-(4-methylpiperazin-1-yl)phenyl]-6-arylpyrimidines present promising antitrypanosomal hit molecules with potential for further preclinical development.
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Affiliation(s)
- Annie E Taylor
- Leicester School of Allied Health Sciences, De Montfort University, Leicester LE1 9BH, UK
| | - Moritz Hering
- Leicester School of Allied Health Sciences, De Montfort University, Leicester LE1 9BH, UK
| | - Mark R J Elsegood
- Department of Chemistry, Loughborough University, Loughborough LE11 3TU, UK
| | - Simon J Teat
- Advanced Light Source, 1 Cyclotron Road, Lawrence Berkeley National Laboratory Berkeley, CA 94720-8229, United States
| | - George W Weaver
- Department of Chemistry, Loughborough University, Loughborough LE11 3TU, UK
| | - Randolph R J Arroo
- Leicester School of Pharmacy, De Montfort University, The Gateway, Leicester LE1 9BH, UK
| | - Marcel Kaiser
- Swiss Tropical and Public Health Institute, Socinstrasse 57, 4051 Basel, Switzerland; University of Basel, Petersplatz 1, 4003 Basel, Switzerland
| | - Pascal Maeser
- Swiss Tropical and Public Health Institute, Socinstrasse 57, 4051 Basel, Switzerland; University of Basel, Petersplatz 1, 4003 Basel, Switzerland
| | - Avninder S Bhambra
- Leicester School of Allied Health Sciences, De Montfort University, Leicester LE1 9BH, UK.
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Villa-Reyna AL, Perez-Velazquez M, González-Félix ML, Gálvez-Ruiz JC, Gonzalez-Mosquera DM, Valencia D, Ballesteros-Monreal MG, Aguilar-Martínez M, Leyva-Peralta MA. The Structure-Antiproliferative Activity Relationship of Pyridine Derivatives. Int J Mol Sci 2024; 25:7640. [PMID: 39062883 PMCID: PMC11276865 DOI: 10.3390/ijms25147640] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2024] [Revised: 07/02/2024] [Accepted: 07/04/2024] [Indexed: 07/28/2024] Open
Abstract
Pyridine, a compound with a heterocyclic structure, is a key player in medicinal chemistry and drug design. It is widely used as a framework for the design of biologically active molecules and is the second most common heterocycle in FDA-approved drugs. Pyridine is known for its diverse biological activity, including antituberculosis, antitumor, anticoagulant, antiviral, antimalarial, antileishmania, anti-inflammatory, anti-Alzheimer's, antitrypanosomal, antimalarial, vasodilatory, antioxidant, antimicrobial, and antiproliferative effects. This review, spanning from 2022 to 2012, involved the meticulous identification of pyridine derivatives with antiproliferative activity, as indicated by their minimum inhibitory concentration values (IC50) against various cancerous cell lines. The aim was to determine the most favorable structural characteristics for their antiproliferative activity. Using computer programs, we constructed and calculated the molecular descriptors and analyzed the electrostatic potential maps of the selected pyridine derivatives. The study found that the presence and positions of the -OMe, -OH, -C=O, and NH2 groups in the pyridine derivatives enhanced their antiproliferative activity over the cancerous cellular lines studied. Conversely, pyridine derivatives with halogen atoms or bulky groups in their structures exhibited lower antiproliferative activity.
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Affiliation(s)
- Ana-Laura Villa-Reyna
- Departamento de Ciencias Químico Biológicas y Agropecuarias, Facultad Interdisiplinaria de Ciencias Biológicas y de Salud, Universidad de Sonora, Campus Caborca, Caborca 83600, Mexico; (A.-L.V.-R.); (D.V.); (M.G.B.-M.)
| | - Martin Perez-Velazquez
- Departamento de Investigaciones Científicas y Tecnológicas, Facultad Interdisiplinaria de Ciencias Biológicas y de Salud, Universidad de Sonora, Campus Hermosillo, Hermosillo 83000, Mexico; (M.P.-V.); (M.L.G.-F.)
| | - Mayra Lizett González-Félix
- Departamento de Investigaciones Científicas y Tecnológicas, Facultad Interdisiplinaria de Ciencias Biológicas y de Salud, Universidad de Sonora, Campus Hermosillo, Hermosillo 83000, Mexico; (M.P.-V.); (M.L.G.-F.)
| | - Juan-Carlos Gálvez-Ruiz
- Departamento de Ciencias Químico Biológicas, Facultad Interdisiplinaria de Ciencias Biológicas y de Salud, Universidad de Sonora, Campus Hermosillo, Hermosillo 83000, Mexico;
| | - Dulce María Gonzalez-Mosquera
- Departamento de Farmacia, Facultad de Química-Farmacia, Universidad Central Marta Abreu Las Villitas, Santa Clara, Cuba;
| | - Dora Valencia
- Departamento de Ciencias Químico Biológicas y Agropecuarias, Facultad Interdisiplinaria de Ciencias Biológicas y de Salud, Universidad de Sonora, Campus Caborca, Caborca 83600, Mexico; (A.-L.V.-R.); (D.V.); (M.G.B.-M.)
| | - Manuel G. Ballesteros-Monreal
- Departamento de Ciencias Químico Biológicas y Agropecuarias, Facultad Interdisiplinaria de Ciencias Biológicas y de Salud, Universidad de Sonora, Campus Caborca, Caborca 83600, Mexico; (A.-L.V.-R.); (D.V.); (M.G.B.-M.)
| | - Milagros Aguilar-Martínez
- Departamento de Ciencias Químico Biológicas y Agropecuarias, Facultad Interdisiplinaria de Ciencias Biológicas y de Salud, Universidad de Sonora, Campus Caborca, Caborca 83600, Mexico; (A.-L.V.-R.); (D.V.); (M.G.B.-M.)
| | - Mario-Alberto Leyva-Peralta
- Departamento de Ciencias Químico Biológicas y Agropecuarias, Facultad Interdisiplinaria de Ciencias Biológicas y de Salud, Universidad de Sonora, Campus Caborca, Caborca 83600, Mexico; (A.-L.V.-R.); (D.V.); (M.G.B.-M.)
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Momin YH, Yeligar VC, Saralaya MG, Dharmamoorthy G, Mallikarjuna BP, Jadhav ST, Das K, Almuqbil M, Ahmad F, Rabbani SI, Asdaq SMB. Computational investigation of 2, 4-Di Tert Butyl Phenol as alpha amylase inhibitor isolated from Coccinia grandis (L.) Voigt using molecular docking, and ADMET parameters. Comput Biol Chem 2024; 110:108087. [PMID: 38718496 DOI: 10.1016/j.compbiolchem.2024.108087] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2024] [Revised: 04/10/2024] [Accepted: 04/24/2024] [Indexed: 05/27/2024]
Abstract
INTRODUCTION Diabetes Mellitus is the metabolic disorder most prevalent globally, accounting for a substantial morbidity rate. The conventional drugs available for the management of diabetes are either expensive or lack the required efficacy. The purpose of this research is to isolate and characterize an active phytoconstituent from Coccinia grandis and assess its anti-diabetic properties. METHODS AND MATERIALS Stems of Coccinia grandis are subjected to successive extraction and isolation. The isolated compound by column chromatography was characterized by FTIR (fourier-transform infrared), 1 H NMR (proton nuclear magnetic resonance), and Mass spectroscopy. The antidiabetic potential of the isolated compound was evaluated by in-vitro alpha-amylase inhibitory activity. Further, the compound was subjected to molecular docking studies to study its interaction with the human pancreatic alpha-amylase (Molegro Virtual Docker) as well to determine the pharmacokinetic and toxicity profile using computational techniques (OSIRIS property explorer, Swiss ADME, pkCSM, and PreADMET). RESULTS The characterization of the compound suggests the structure to be 2,4-ditertiary butyl phenol. The in-vitro alpha-amylase inhibitory study indicated a concentration-dependent inhibition and the IC50 (median lethal dose) value of the isolated compound was found to be 64.36 μg/ml. The docking study with the A chain of receptor 5EMY yielded a favorable docking score of -81.48 Kcal mol-1, suggesting that the compound binds to the receptor with high affinity through electrostatic, hydrophobic, and hydrogen bonds. Furthermore, the silico ADME analysis of the compound revealed improved metabolism, a skin permeability of -3.87 cm/s, gastrointestinal absorption of 95.48 %, and a total clearance of 0.984 log ml min-1 kg-1. In silico toxicity analysis also predicted cutaneous irritations but no carcinogenicity, mutagenicity, or hepatotoxicity. CONCLUSION The data suggested that the isolated compound (2, 4-tertiary butyl phenol) has the potential to inhibit the alpha-amylase activity and possess optimal ADME properties as well as tolerable side effects.
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Affiliation(s)
- Yasmin H Momin
- Department of Pharmaceutical Chemistry, Annasaheb Dange College of B.Pharmacy, Ashta, MH 416301, India
| | - V C Yeligar
- Department of Pharmaceutical Chemistry, S Krishna Institute of Pharmacy, #39, Karad, Malkapur, Maharashtra 415539, India
| | - M G Saralaya
- Department of Pharmaceutical Chemistry, Annasaheb Dange College of B.Pharmacy, Ashta, MH 416301, India
| | - G Dharmamoorthy
- Department of Pharmaceutical Chemistry, MB School of Pharmaceutical Sciences, Mohan Babu University, Tirupati 517102, India
| | - B P Mallikarjuna
- Department of Pharmaceutical Chemistry, MB School of Pharmaceutical Sciences, Mohan Babu University, Tirupati 517102, India.
| | - S T Jadhav
- Department of Pharmaceutics, Rajarambapu College of Pharmacy, Kasegaon, Maharashtra 517102, India
| | - Kuntal Das
- Dept of Pharmacognosy, Mallige College of Pharmacy, #71, Silvepura, Chikkabanavara Post, Bengaluru 560090, India.
| | - Mansour Almuqbil
- Department of Clinical Pharmacy, College of Pharmacy, King Saud University, Riyadh 11451, Saudi Arabia.
| | - Fuzail Ahmad
- Department of Respiratory Therapy, College of Applied Sciences, AlMareefa University, Diriya, Riyadh, Saudi Arabia.
| | - Syed Imam Rabbani
- Department of Pharmacology and Toxicology, College of Pharmacy, Qassim University, Buraydah 51452, Saudi Arabia
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Filho EV, Pinheiro EM, Pinheiro S, Greco SJ. Aminopyrimidines: Recent synthetic procedures and anticancer activities. Tetrahedron 2021. [DOI: 10.1016/j.tet.2021.132256] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
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