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Qu Z, Pan H, Gong J, Wang C, Filker S, Hu X. Historical Review of Studies on Cyrtophorian Ciliates (Ciliophora, Cyrtophoria) from China. Microorganisms 2022; 10:1325. [PMID: 35889042 PMCID: PMC9323287 DOI: 10.3390/microorganisms10071325] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2022] [Revised: 06/26/2022] [Accepted: 06/27/2022] [Indexed: 12/12/2022] Open
Abstract
The subclass Cyrtophoria are a group of morphologically specialized ciliates which mainly inhabit soil, freshwater, brackish water, and marine environments. In this study, we revise more than 50 publications on the taxonomy, phylogeny, and ecology of cyrtophorian ciliates in China since the first publication in 1925, most of which were carried out in coastal areas. The research history can be divided into three periods: the early stage, the Tibet stage, and the molecular stage. To date, 103 morpho-species (147 isolates) have been formally recorded in China, with ciliature patterns described for 82 of them. A species checklist and an illustrated identification key to the genera are provided. A total of 100 small subunit rDNA sequences have been obtained for 74 taxonomic hits (lowest taxonomic rank to species or genus). These sequences are used for the study of molecular phylogeny. Based on these morphological data and molecular phylogeny analyses, we synthesize the understanding of the phylogeny of cyrtophorian ciliates. We hypothesize that the key evolutionary event of cyrtophorian ciliates lies in the separation of the stomatogenesis zone (postoral kineties) from the left kineties, namely, the formation of an independent "sexual organelle". We, furthermore, briefly summarize the ecological features of cyrtophorian ciliates and provide a comprehensive bibliography of related research from China. Finally, we give an outlook on the future research directions of these taxa.
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Affiliation(s)
- Zhishuai Qu
- State Key Laboratory of Marine Environmental Science, College of the Environment and Ecology, Xiamen University, Xiamen 361104, China
| | - Hongbo Pan
- Engineering Research Center of Environmental DNA and Ecological Water Health Assessment, Shanghai Ocean University, Shanghai 201306, China;
| | - Jun Gong
- School of Marine Sciences, Sun Yat-Sen University, Zhuhai 519082, China;
| | - Congcong Wang
- Key Laboratory of Mariculture, Ministry of Education, College of Fisheries, Ocean University of China, Qingdao 266003, China;
| | - Sabine Filker
- Department of Molecular Ecology, University of Kaiserslautern, 67663 Kaiserslautern, Germany;
| | - Xiaozhong Hu
- Key Laboratory of Mariculture, Ministry of Education, College of Fisheries, Ocean University of China, Qingdao 266003, China;
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Jin D, Qu Z, Wei B, Montagnes DJS, Fan X, Chen X. Two parasitic ciliates (Protozoa: Ciliophora: Phyllopharyngea) isolated from respiratory-mucus of an unhealthy beluga whale: characterization, phylogeny and an assessment of morphological adaptations. Zool J Linn Soc 2020. [DOI: 10.1093/zoolinnean/zlaa086] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Abstract
Ciliates occur in the blowholes of marine mammals, but our understanding of their biology is poor. Consequently, we investigated an infestation of ciliates in an unhealthy, captive beluga whale that was exhibiting accelerated breathing, leukocytosis and expulsion of unusually large amounts of viscous sputum. This sputum contained ~104 ciliates mL-1 (when healthy, numbers were ten- to 100-fold lower). One known ciliate species, Planilamina ovata, is fully characterized, and a new species, Kyaroikeus paracetarius sp. nov., is here described. The new species is established based on its larger number of left kineties over its only congener. Sequences of small-subunit rDNA, large-subunit rDNA and ITS1-5.8S-ITS2 regions of these two taxa were used in phylogenetic analyses, inferring that Kyaroikeus and Planilamina have close affinity with the free-living family Dysteriidae, contradicting their morphology-based assignment to the family Kyaroikeidae. We suggest that Kyaroikeidae be relegated to subfamily status. Finally, by comparing parasitic species with free-living taxa, we suggest how these ciliates have adapted to their unique environment and how they may have initially invaded the host. We provide essential data and concepts for the continued evaluation of ciliate-parasites in whale blowholes.
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Affiliation(s)
- Didi Jin
- School of Marine Sciences, Ningbo University, Ningbo, China
| | - Zhishuai Qu
- Department of Ecology, University of Kaiserslautern, Kaiserslautern, Germany
| | - Bojue Wei
- School of Marine Sciences, Ningbo University, Ningbo, China
| | | | - Xinpeng Fan
- School of Life Sciences, East China Normal University, Shanghai, China
| | - Xiangrui Chen
- School of Marine Sciences, Ningbo University, Ningbo, China
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Liu W, Zhang K, Chen C, Li J, Tan Y, Warren A, Lin X, Song W. Overview of the biodiversity and geographic distribution of aloricate oligotrich ciliates (Protozoa, Ciliophora, Spirotrichea) in coastal waters of southern China. SYST BIODIVERS 2019. [DOI: 10.1080/14772000.2019.1691081] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Affiliation(s)
- Weiwei Liu
- Laboratory of Protozoology, Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring, South China Normal University, Guangzhou 510631, China
- Key Laboratory of Tropical Marine Bio-resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Science, Guangzhou 510301, China
- Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou 511458, China
| | - Kexin Zhang
- Laboratory of Protozoology, Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring, South China Normal University, Guangzhou 510631, China
| | - Changzhi Chen
- Laboratory of Protozoology, Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring, South China Normal University, Guangzhou 510631, China
| | - Jiqiu Li
- Laboratory of Protozoology, Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring, South China Normal University, Guangzhou 510631, China
| | - Yehui Tan
- Key Laboratory of Tropical Marine Bio-resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Science, Guangzhou 510301, China
- Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou 511458, China
| | - Alan Warren
- Department of Life Sciences, Natural History Museum, Cromwell Road, London SW75BD, UK
| | - Xiaofeng Lin
- Laboratory of Protozoology, Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring, South China Normal University, Guangzhou 510631, China
| | - Weibo Song
- Institute of Evolution and Marine Biodiversity, Ocean University of China, Qingdao 266003, China
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Qu Z, Li L, Lin X, Stoeck T, Pan H, Al-Rasheid KAS, Song W. Diversity of the cyrtophorid genus Chlamydodon (Protista, Ciliophora): its systematics and geographic distribution, with taxonomic descriptions of three species. SYST BIODIVERS 2018. [DOI: 10.1080/14772000.2018.1456493] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Affiliation(s)
- Zhishuai Qu
- Key Laboratory of Exploration and Utilization of Aquatic Genetic Resources, Shanghai Ocean University, Shanghai 201306, China
- Laboratory of Protozoology, Institute of Evolution & Marine Biodiversity, Ocean University of China, Qingdao 266003, China
- Department of Ecology, University of Kaiserslautern, Kaiserslautern 67663, Germany
| | - Lifang Li
- Marine College, Shandong University, Weihai 264209, China
| | - Xiaofeng Lin
- Laboratory of Protozoology, Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring, College of Life Science, South China Normal University, Guangzhou 510631, China
| | - Thorsten Stoeck
- Department of Ecology, University of Kaiserslautern, Kaiserslautern 67663, Germany
| | - Hongbo Pan
- Key Laboratory of Exploration and Utilization of Aquatic Genetic Resources, Shanghai Ocean University, Shanghai 201306, China
| | - Khaled A. S. Al-Rasheid
- Zoology Department, College of Science, King Saud University, P.O. Box 2455, Riyadh 11451, Saudi Arabia
| | - Weibo Song
- Laboratory of Protozoology, Institute of Evolution & Marine Biodiversity, Ocean University of China, Qingdao 266003, China
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Yan Y, Fan Y, Luo X, El-Serehy HA, Bourland W, Chen X. New contribution to the species-rich genus Euplotes: Morphology, ontogeny and systematic position of two species (Ciliophora; Euplotia). Eur J Protistol 2018; 64:20-39. [PMID: 29621653 DOI: 10.1016/j.ejop.2018.03.003] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2017] [Revised: 03/02/2018] [Accepted: 03/12/2018] [Indexed: 10/17/2022]
Abstract
The morphology, ontogeny and phylogeny of two Euplotes species, E. estuarinus sp. nov. and a population of E. platystoma Dragesco and Dragesco-Kernéis, 1986, both collected from tropical brackish waters in south China, were investigated based on living morphology, ciliary pattern and molecular data. Euplotes estuarinus sp. nov. is small (about 60 × 40 μm in vivo), has a dargyrome of the double-eurystomus type, and the transverse cirri are arranged in two groups, with two left and three right ones. The original description of the poorly known species, E. platystoma, is brief, and the species was never investigated using live observation and molecular methods Hence, we provided a detailed redescription. Some stages of their morphogenesis were observed which proceed in the same pattern as in their congeners. The new species E. estuarinus sp. nov. clusters with E. curdsi, differing only by 1 bp in their SSU rRNA gene sequences, which is likely due to the recent speciation event and the limited resolution of the SSU rRNA gene at species level in this group as the two species are clearly morphologically distinct.
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Affiliation(s)
- Ying Yan
- School of Marine Sciences, Ningbo University, Ningbo 315211, China; Institute of Evolution and Marine Biodiversity, Ocean University of China, Qingdao 266003, China
| | - Yangbo Fan
- Institute of Evolution and Marine Biodiversity, Ocean University of China, Qingdao 266003, China; School of Civil and Environment Engineering, Harbin Institute of Technology, Shenzhen 518000, China
| | - Xiaotian Luo
- Department of Biological Sciences, Boise State University, Boise 83725, USA
| | - Hamed A El-Serehy
- Department of Zoology, King Saud University, Riyadh 11451, Saudi Arabia
| | - William Bourland
- Department of Biological Sciences, Boise State University, Boise 83725, USA
| | - Xiangrui Chen
- School of Marine Sciences, Ningbo University, Ningbo 315211, China.
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Chen X, Li L, Al-Farraj SA, Ma H, Pan H. Taxonomic studies on Aegyria apoliva sp. nov. and Trithigmostoma cucullulus (Müller, 1786) Jankowski, 1967 (Ciliophora, Cyrtophoria) with phylogenetic analyses. Eur J Protistol 2017; 62:122-134. [PMID: 29331864 DOI: 10.1016/j.ejop.2017.12.005] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2017] [Revised: 12/08/2017] [Accepted: 12/20/2017] [Indexed: 10/18/2022]
Abstract
The morphology, including the ciliary pattern, of two cyrtophorid ciliates, namely Aegyria apoliva sp. nov. and Trithigmostoma cucullulus (Müller, 1786) Jankowski, 1967, were investigated. They were isolated from coastal water off Qingdao and from an estuarine habitat in south China, respectively. Aegyria apoliva sp. nov. is characterized as following: body size 100-120 × 50-70 μm in vivo with dark pigment spot on anterior left part of cell; 48-69 somatic kineties; one preoral and four or five circumoral kineties; 9-13 transpodial segments; 26-40 nematodesmal rods; 6-10 contractile vacuoles. The Guangzhou population of Trithigmostoma cucullulus corresponds well with previously described populations, therefore only a brief morphological description is presented. Phylogenetic analysis based on small-subunit rRNA gene sequences data supports the establishment of the new species as well as the monophyly of both genera.
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Affiliation(s)
- Xumiao Chen
- Department of Marine Organism Taxonomy and Phylogeny, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, China; Laboratory of Protozoology, Institute of Evolution and Marine Biodiversity, Ocean University of China, Qingdao 266003, China
| | - Lifang Li
- Marine College, Shandong University, Weihai 264209, China
| | - Saleh A Al-Farraj
- Zoology Department, College of Science, King Saud University, Riyadh 11451, Saudi Arabia
| | - Honggang Ma
- Laboratory of Protozoology, Institute of Evolution and Marine Biodiversity, Ocean University of China, Qingdao 266003, China.
| | - Hongbo Pan
- College of Oceanography, Hohai University, Nanjing 210098, China.
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Liu W, Jiang J, Xu Y, Pan X, Qu Z, Luo X, El-Serehy HA, Warren A, Ma H, Pan H. Diversity of free-living marine ciliates (Alveolata, Ciliophora): Faunal studies in coastal waters of China during the years 2011–2016. Eur J Protistol 2017; 61:424-438. [DOI: 10.1016/j.ejop.2017.04.007] [Citation(s) in RCA: 58] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2016] [Revised: 04/10/2017] [Accepted: 04/13/2017] [Indexed: 10/24/2022]
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Qu Z, Pan H, Lin X, Li L, Aleidan AMA, Al-Farraj SA, Stoeck T, Hu X. A Contribution to the Morphology and Phylogeny of Chlamydodon, with Three New Species from China (Ciliophora, Cyrtophoria). J Eukaryot Microbiol 2017; 65:236-249. [PMID: 28888076 DOI: 10.1111/jeu.12472] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2017] [Revised: 08/15/2017] [Accepted: 09/01/2017] [Indexed: 11/27/2022]
Abstract
Three new cyrtophorian ciliates isolated from coastal areas of China were described based on morphological and genetic data. The Chlamydodon mnemosyne-like species Chlamydodon similis sp. n. differs from its congeners mainly by its number of somatic kineties. Chlamydodon oligochaetus sp. n. is distinguished from its congeners mainly by having fewer somatic kineties, and/or an elongated body shape. Chlamydodon crassidens sp. n. is characterized mainly by an inverted triangular body shape, a posteriorly interrupted cross-striated band (5-6 μm wide), and a large cytostome. Moreover, we provided small-subunit (SSU) rDNA sequences of C. similis sp. n. and C. oligochaetus sp. n. Maximum likelihood (ML) and Bayesian inference (BI) consistently placed C. similis sp. n. as a sister to C. paramnemosyne, but showed different branching position of C. oligochaetus sp. n., which may be due to a low taxon sampling in the Chlamydodontidae and/or an insufficient resolution of the marker gene at species level.
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Affiliation(s)
- Zhishuai Qu
- Institute of Evolution & Marine Biodiversity, Ocean University of China, Qingdao, 266003, China.,Department of Ecology, University of Kaiserslautern, Kaiserslautern, 67663, Germany
| | - Hongbo Pan
- Department of Ecology, University of Kaiserslautern, Kaiserslautern, 67663, Germany.,College of Fisheries and Life Science, Shanghai Ocean University, Shanghai, 201306, China
| | - Xiaofeng Lin
- College of Life Science, South China Normal University, Guangzhou, 510631, China
| | - Lifang Li
- Marine College, Shandong University, Weihai, 264209, China
| | | | - Saleh A Al-Farraj
- Zoology Department, College of Science, King Saud University, P. O. Box 2455, Riyadh, 11451, Saudi Arabia
| | - Thorsten Stoeck
- Department of Ecology, University of Kaiserslautern, Kaiserslautern, 67663, Germany
| | - Xiaozhong Hu
- Institute of Evolution & Marine Biodiversity, Ocean University of China, Qingdao, 266003, China
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