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Fritz PA, Boom RM, Schroën C. Electrochemically driven adsorptive separation techniques: From ions to proteins and cells in liquid streams. Sep Purif Technol 2021. [DOI: 10.1016/j.seppur.2021.118754] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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2
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Masi M, Bollella P, Katz E. DNA Release from a Modified Electrode Triggered by a Bioelectrocatalytic Process. ACS APPLIED MATERIALS & INTERFACES 2019; 11:47625-47634. [PMID: 31794177 DOI: 10.1021/acsami.9b18427] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
DNA release from an electrode surface was stimulated by application of a mild electrical potential (0 V vs Ag/AgCl). The release process was activated by interfacial pH increase originating from H+ consumption during O2 reduction bio-electrocatalyzed by bilirubin oxidase immobilized at the electrode surface. The pH increase resulted in a change of the electrical charge from positive to negative at the surface of SiO2 nanoparticles (200 nm) associated with the electrode surface and functionalized with trigonelline and boronic acid. While the negatively charged DNA molecules were electrostatically bound to the positively charged surface, the negative charge produced upon O2 reduction resulted in the DNA repulsion and release from the modified interface. The small electrical potential for O2 reduction resulting in the interface recharge was allowed due to the bio-electrocatalysis using bilirubin oxidase enzyme. While, in the first set of experiments, the potential was applied on the modified electrode from an electrochemical instrument, later it was generated in situ by biocatalytic or photo-biocatalytic processes at a connected electrode. A multistep biocatalytic cascade generating NADH or photosynthetic process in thylakoid membranes was used to produce in situ a small potential to stimulate the DNA release catalyzed by bilirubin oxidase. The designed system can be used for different release processes triggered by various signals (electrical, biomolecular, and light signals, etc.), thus representing a general interfacial platform for the controlled release of different biomolecules and nanosize species.
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Affiliation(s)
- Madeline Masi
- Department of Chemistry and Biomolecular Science , Clarkson University , Potsdam , New York 13699-5810 , United States
| | - Paolo Bollella
- Department of Chemistry and Biomolecular Science , Clarkson University , Potsdam , New York 13699-5810 , United States
| | - Evgeny Katz
- Department of Chemistry and Biomolecular Science , Clarkson University , Potsdam , New York 13699-5810 , United States
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Bellare M, Kadambar VK, Bollella P, Katz E, Melman A. Molecular Release Associated with Interfacial pH Change Stimulated by a Small Electrical Potential Applied. ChemElectroChem 2019. [DOI: 10.1002/celc.201901713] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Affiliation(s)
- Madhura Bellare
- Department of Chemistry and Biomolecular ScienceClarkson University Potsdam NY 13699 USA
| | | | - Paolo Bollella
- Department of Chemistry and Biomolecular ScienceClarkson University Potsdam NY 13699 USA
| | - Evgeny Katz
- Department of Chemistry and Biomolecular ScienceClarkson University Potsdam NY 13699 USA
| | - Artem Melman
- Department of Chemistry and Biomolecular ScienceClarkson University Potsdam NY 13699 USA
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Masi M, Bollella P, Katz E. Biomolecular Release Stimulated by Electrochemical Signals at a Very Small Potential Applied. ELECTROANAL 2019. [DOI: 10.1002/elan.201900377] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Madeline Masi
- Department of Chemistry and Biomolecular ScienceClarkson University Potsdam NY 13699–5810 USA
| | - Paolo Bollella
- Department of Chemistry and Biomolecular ScienceClarkson University Potsdam NY 13699–5810 USA
| | - Evgeny Katz
- Department of Chemistry and Biomolecular ScienceClarkson University Potsdam NY 13699–5810 USA
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Bellare M, Kadambar VK, Bollella P, Gamella M, Katz E, Melman A. Electrochemical Signal‐triggered Release of Biomolecules Functionalized with His‐tag Units. ELECTROANAL 2019. [DOI: 10.1002/elan.201900238] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Madhura Bellare
- Department of Chemistry and Biomolecular ScienceClarkson University Potsdam NY 13699 USA
| | | | - Paolo Bollella
- Department of Chemistry and Biomolecular ScienceClarkson University Potsdam NY 13699 USA
| | - Maria Gamella
- Department of Chemistry and Biomolecular ScienceClarkson University Potsdam NY 13699 USA
| | - Evgeny Katz
- Department of Chemistry and Biomolecular ScienceClarkson University Potsdam NY 13699 USA
| | - Artem Melman
- Department of Chemistry and Biomolecular ScienceClarkson University Potsdam NY 13699 USA
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Gamella M, Privman M, Bakshi S, Melman A, Katz E. DNA Release from Fe
3+
‐Cross‐Linked Alginate Films Triggered by Logically Processed Biomolecular Signals: Integration of Biomolecular Computing and Actuation. Chemphyschem 2017; 18:1811-1821. [DOI: 10.1002/cphc.201700301] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2017] [Revised: 04/29/2017] [Indexed: 11/10/2022]
Affiliation(s)
- Maria Gamella
- Department of Chemistry and Biomolecular Science Clarkson University Potsdam NY 13699-5810 USA
| | - Marina Privman
- Empire State College State University of New York (SUNY) P.O. Box 908 Fort Drum NY 13602 USA
| | - Saira Bakshi
- Department of Chemistry and Biomolecular Science Clarkson University Potsdam NY 13699-5810 USA
| | - Artem Melman
- Department of Chemistry and Biomolecular Science Clarkson University Potsdam NY 13699-5810 USA
| | - Evgeny Katz
- Department of Chemistry and Biomolecular Science Clarkson University Potsdam NY 13699-5810 USA
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Honarvarfard E, Gamella M, Channaveerappa D, Darie CC, Poghossian A, Schöning MJ, Katz E. Electrochemically Stimulated Insulin Release from a Modified Graphene‐functionalized Carbon Fiber Electrode. ELECTROANAL 2017. [DOI: 10.1002/elan.201700095] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Elham Honarvarfard
- Department of Chemistry and Biomolecular Science Clarkson University Potsdam NY 13699–5810 USA
| | - Maria Gamella
- Department of Chemistry and Biomolecular Science Clarkson University Potsdam NY 13699–5810 USA
| | - Devika Channaveerappa
- Department of Chemistry and Biomolecular Science Clarkson University Potsdam NY 13699–5810 USA
| | - Costel C. Darie
- Department of Chemistry and Biomolecular Science Clarkson University Potsdam NY 13699–5810 USA
| | - Arshak Poghossian
- Institute of Nano- and Biotechnologies, FH Aachen, Aachen University of Applied Sciences Campus Jülich Heinrich-Mußmann-Str. 1 D-52428 Jülich Germany
- Peter Grünberg Institute (PGI-8) Research Centre Jülich GmbH D-52425 Jülich Germany
| | - Michael J. Schöning
- Institute of Nano- and Biotechnologies, FH Aachen, Aachen University of Applied Sciences Campus Jülich Heinrich-Mußmann-Str. 1 D-52428 Jülich Germany
- Peter Grünberg Institute (PGI-8) Research Centre Jülich GmbH D-52425 Jülich Germany
| | - Evgeny Katz
- Department of Chemistry and Biomolecular Science Clarkson University Potsdam NY 13699–5810 USA
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Gamella M, Zakharchenko A, Guz N, Masi M, Minko S, Kolpashchikov DM, Iken H, Poghossian A, Schöning MJ, Katz E. DNA Computing Systems Activated by Electrochemically-triggered DNA Release from a Polymer-brush-modified Electrode Array. ELECTROANAL 2017; 29:398-408. [PMID: 29379265 PMCID: PMC5786385 DOI: 10.1002/elan.201600389] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2016] [Accepted: 06/23/2016] [Indexed: 12/23/2022]
Abstract
An array of four independently wired indium tin oxide (ITO) electrodes was used for electrochemically stimulated DNA release and activation of DNA-based Identity, AND and XOR logic gates. Single-stranded DNA molecules were loaded on the mixed poly(N,N-di-methylaminoethyl methacrylate) (PDMAEMA)/poly-(methacrylic acid) (PMAA) brush covalently attached to the ITO electrodes. The DNA deposition was performed at pH 5.0 when the polymer brush is positively charged due to protonation of tertiary amino groups in PDMAE-MA, thus resulting in electrostatic attraction of the negatively charged DNA. By applying electrolysis at -1.0 V(vs. Ag/AgCl reference) electrochemical oxygen reduction resulted in the consumption of hydrogen ions and local pH increase near the electrode surface. The process resulted in recharging the polymer brush to the negative state due to dissociation of carboxylic groups of PMAA, thus repulsing the negatively charged DNA and releasing it from the electrode surface. The DNA release was performed in various combinations from different electrodes in the array assembly. The released DNA operated as input signals for activation of the Boolean logic gates. The developed system represents a step forward in DNA computing, combining for the first time DNA chemical processes with electronic input signals.
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Affiliation(s)
- Maria Gamella
- Department of Chemistry and Biomolecular Science, Clarkson University, Potsdam, NY 13699-5810, USA, http://people.clarkson.edu/~ekatz/
| | - Andrey Zakharchenko
- Nanostructured Materials Lab, The University of Georgia, Athens, GA 30602, USA
| | - Nataliia Guz
- Department of Chemistry and Biomolecular Science, Clarkson University, Potsdam, NY 13699-5810, USA, http://people.clarkson.edu/~ekatz/
| | - Madeline Masi
- Department of Chemistry and Biomolecular Science, Clarkson University, Potsdam, NY 13699-5810, USA, http://people.clarkson.edu/~ekatz/
| | - Sergiy Minko
- Nanostructured Materials Lab, The University of Georgia, Athens, GA 30602, USA
| | - Dmitry M. Kolpashchikov
- Chemistry Department, University of Central Florida, 4000 Central Florida Boulevard, Orlando, FL 32816-2366, USA
| | - Heiko Iken
- Institute of Nano- and Biotechnologies, Aachen University of Applied Sciences, Campus Jülich, Heinrich-Muβmann-Str. 1, D-52428 Jülich, Germany
| | - Arshak Poghossian
- Institute of Nano- and Biotechnologies, Aachen University of Applied Sciences, Campus Jülich, Heinrich-Muβmann-Str. 1, D-52428 Jülich, Germany
- Institute of Bio- and Nanosystems, Research Centre Jülich, GmbH, D-52425 Jülich Germany
| | - Michael J. Schöning
- Institute of Nano- and Biotechnologies, Aachen University of Applied Sciences, Campus Jülich, Heinrich-Muβmann-Str. 1, D-52428 Jülich, Germany
- Institute of Bio- and Nanosystems, Research Centre Jülich, GmbH, D-52425 Jülich Germany
| | - Evgeny Katz
- Department of Chemistry and Biomolecular Science, Clarkson University, Potsdam, NY 13699-5810, USA, http://people.clarkson.edu/~ekatz/
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Masi M, Gamella M, Guz N, Katz E. Electrochemically Triggered DNA Release from a Mixed-brush Polymer-modified Electrode. ELECTROANAL 2016. [DOI: 10.1002/elan.201600275] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Affiliation(s)
- Madeline Masi
- Department of Chemistry and Biomolecular Science; Clarkson University; Potsdam NY 13699-5810 USA
| | - Maria Gamella
- Department of Chemistry and Biomolecular Science; Clarkson University; Potsdam NY 13699-5810 USA
| | - Nataliia Guz
- Department of Chemistry and Biomolecular Science; Clarkson University; Potsdam NY 13699-5810 USA
| | - Evgeny Katz
- Department of Chemistry and Biomolecular Science; Clarkson University; Potsdam NY 13699-5810 USA
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Honarvarfard E, Gamella M, Guz N, Katz E. Electrochemically-controlled DNA Release under Physiological Conditions from a Monolayer-modified Electrode. ELECTROANAL 2016. [DOI: 10.1002/elan.201600560] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Elham Honarvarfard
- Department of Chemistry and Biomolecular Science; Clarkson University; Potsdam, NY 13699-5810 USA
| | - Maria Gamella
- Department of Chemistry and Biomolecular Science; Clarkson University; Potsdam, NY 13699-5810 USA
| | - Nataliia Guz
- Department of Chemistry and Biomolecular Science; Clarkson University; Potsdam, NY 13699-5810 USA
| | - Evgeny Katz
- Department of Chemistry and Biomolecular Science; Clarkson University; Potsdam, NY 13699-5810 USA
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11
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Gamella M, Guz N, Katz E. DNA Release from a Bioelectronic Interface Stimulated by a DNA Signal – Amplification of DNA Signals. ELECTROANAL 2016. [DOI: 10.1002/elan.201600077] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Affiliation(s)
- Maria Gamella
- Department of Chemistry and Biomolecular Science Clarkson University Potsdam NY 13699-5810 USA
| | - Nataliia Guz
- Department of Chemistry and Biomolecular Science Clarkson University Potsdam NY 13699-5810 USA
| | - Evgeny Katz
- Department of Chemistry and Biomolecular Science Clarkson University Potsdam NY 13699-5810 USA
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Sempionatto JR, Gamella M, Guz N, Pingarrón JM, Pedrosa VA, Minko S, Katz E. Electrochemically Stimulated DNA Release from a Polymer-Brush Modified Electrode. ELECTROANAL 2015. [DOI: 10.1002/elan.201500252] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
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Wang CH, Lee YH, Kuo HT, Liang WF, Li WJ, Lee GB. Dielectrophoretically-assisted electroporation using light-activated virtual microelectrodes for multiple DNA transfection. LAB ON A CHIP 2014; 14:592-601. [PMID: 24322338 DOI: 10.1039/c3lc51102b] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Gene transfection is an important technology for various biological applications. The exogenous DNA is commonly delivered into cells by using a strong electrical field to form transient pores in cellular membranes. However, the high voltage required in this electroporation process may cause cell damage. In this study, a dielectrophoretically-assisted electroporation was developed by using light-activated virtual microelectrodes in a new microfluidic platform. The DNA electrotransfection used a low applied voltage and an alternating current to enable electroporation and transfection. Single or triple fluorescence-carrying plasmids were effectively transfected into various types of mammalian cells, and the fluorescent proteins were successfully expressed in live transfected cells. Moreover, the multi-triangle optical pattern that was projected onto a photoconductive layer to generate localized non-uniform virtual electric fields was found to have high transfection efficiency. The developed dielectrophoretically-assisted electroporation platform may provide a simpler system for gene transfection and could be widely applied in many biotechnological fields.
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Affiliation(s)
- Chih-Hung Wang
- Department of Power Mechanical Engineering, National Tsing Hua University, Hsinchu, Taiwan.
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Wang F, Wang J, Zhai Y, Li G, Li D, Dong S. Layer-by-layer assembly of biologically inert inorganic ions/DNA multilayer films for tunable DNA release by chelation. J Control Release 2008; 132:65-73. [DOI: 10.1016/j.jconrel.2008.08.016] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2008] [Revised: 08/15/2008] [Accepted: 08/20/2008] [Indexed: 12/18/2022]
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16
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Li J, Du Y, Fang C. Developing an Iridium Oxide Film Modified Microelectrode for Microscale Measurement of pH. ELECTROANAL 2007. [DOI: 10.1002/elan.200603753] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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Label-free detection of DNA hybridization based on EIS investigation of conducting properties of functionalized polythiophene matrix. J Electroanal Chem (Lausanne) 2006. [DOI: 10.1016/j.jelechem.2005.11.021] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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