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Hricovíni M, Owens RJ, Bak A, Kozik V, Musiał W, Pierattelli R, Májeková M, Rodríguez Y, Musioł R, Slodek A, Štarha P, Piętak K, Słota D, Florkiewicz W, Sobczak-Kupiec A, Jampílek J. Chemistry towards Biology-Instruct: Snapshot. Int J Mol Sci 2022; 23:14815. [PMID: 36499140 PMCID: PMC9739621 DOI: 10.3390/ijms232314815] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2022] [Revised: 11/15/2022] [Accepted: 11/23/2022] [Indexed: 12/05/2022] Open
Abstract
The knowledge of interactions between different molecules is undoubtedly the driving force of all contemporary biomedical and biological sciences. Chemical biology/biological chemistry has become an important multidisciplinary bridge connecting the perspectives of chemistry and biology to the study of small molecules/peptidomimetics and their interactions in biological systems. Advances in structural biology research, in particular linking atomic structure to molecular properties and cellular context, are essential for the sophisticated design of new medicines that exhibit a high degree of druggability and very importantly, druglikeness. The authors of this contribution are outstanding scientists in the field who provided a brief overview of their work, which is arranged from in silico investigation through the characterization of interactions of compounds with biomolecules to bioactive materials.
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Affiliation(s)
- Miloš Hricovíni
- Institute of Chemistry, Slovak Academy of Sciences, Dúbravská cesta 9, 845 38 Bratislava, Slovakia
| | - Raymond J. Owens
- Structural Biology, The Rosalind Franklin Institute, Harwell Science Campus, UK, University of Oxford, Oxford OX11 0QS, UK
- Division of Structural Biology, The Wellcome Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, UK
| | - Andrzej Bak
- Institute of Chemistry, University of Silesia, Szkolna 9, 40 007 Katowice, Poland
| | - Violetta Kozik
- Institute of Chemistry, University of Silesia, Szkolna 9, 40 007 Katowice, Poland
| | - Witold Musiał
- Department of Physical Chemistry and Biophysics, Pharmaceutical Faculty, Wroclaw Medical University, Borowska 211A, 50 556 Wrocław, Poland
| | - Roberta Pierattelli
- Magnetic Resonance Center and Department of Chemistry “Ugo Schiff”, University of Florence, 50019 Sesto Fiorentino, Italy
| | - Magdaléna Májeková
- Center of Experimental Medicine SAS and Department of Biochemical Pharmacology, Institute of Experimental Pharmacology and Toxicology, Slovak Academy of Sciences, Dubravska cesta 9, 841 04 Bratislava, Slovakia
| | - Yoel Rodríguez
- Department of Natural Sciences, Eugenio María de Hostos Community College, City University of New York, 500 Grand Concourse, Bronx, NY 10451, USA
- Department of Pharmacological Sciences, Icahn School of Medicine at Mount Sinai, 1425 Madison Avenue, New York, NY 10029, USA
| | - Robert Musioł
- Institute of Chemistry, University of Silesia, Szkolna 9, 40 007 Katowice, Poland
| | - Aneta Slodek
- Institute of Chemistry, University of Silesia, Szkolna 9, 40 007 Katowice, Poland
| | - Pavel Štarha
- Department of Inorganic Chemistry, Faculty of Science, Palacký University Olomouc, 17. listopadu 1192/12, 771 46 Olomouc, Czech Republic
| | - Karina Piętak
- Department of Materials Science, Faculty of Materials Engineering and Physics, Cracow University of Technology, 37 Jana Pawła II Av., 31 864 Krakow, Poland
| | - Dagmara Słota
- Department of Materials Science, Faculty of Materials Engineering and Physics, Cracow University of Technology, 37 Jana Pawła II Av., 31 864 Krakow, Poland
| | - Wioletta Florkiewicz
- Department of Materials Science, Faculty of Materials Engineering and Physics, Cracow University of Technology, 37 Jana Pawła II Av., 31 864 Krakow, Poland
| | - Agnieszka Sobczak-Kupiec
- Department of Materials Science, Faculty of Materials Engineering and Physics, Cracow University of Technology, 37 Jana Pawła II Av., 31 864 Krakow, Poland
| | - Josef Jampílek
- Department of Analytical Chemistry, Faculty of Natural Sciences, Comenius University, Ilkovičova 6, 842 15 Bratislava, Slovakia
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Santharam Roja S, Shylaja A, Kumar R. Phenothiazine‐Tethered 2‐Aminopyridine‐3‐carbonitrile: Fluorescent Turn‐Off Chemosensor for Fe
3+
Ions and Picric Acid. ChemistrySelect 2020. [DOI: 10.1002/slct.201904425] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Somi Santharam Roja
- Somi Santharam Roja, Adaikalam Shylaja and Dr. Raju Ranjith KumarDepartment of Organic Chemistry, School of Chemistry Madurai Kamaraj University Madurai 625 021, Tamil Nadu India
| | - Adaikalam Shylaja
- Somi Santharam Roja, Adaikalam Shylaja and Dr. Raju Ranjith KumarDepartment of Organic Chemistry, School of Chemistry Madurai Kamaraj University Madurai 625 021, Tamil Nadu India
| | - RajuRanjith Kumar
- Somi Santharam Roja, Adaikalam Shylaja and Dr. Raju Ranjith KumarDepartment of Organic Chemistry, School of Chemistry Madurai Kamaraj University Madurai 625 021, Tamil Nadu India
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3
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Golba S. Electrochemical and Opto-Electronic Properties of Carbazole-Based Derivatives with Symmetric A–CZ–A Architecture. RUSS J ELECTROCHEM+ 2018. [DOI: 10.1134/s1023193518070030] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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4
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Karuppasamy A, Udhaya kumar C, Velayutham Pillai MP, Ramalingan C. Synthesis, spectral, structural and DFT studies of novel dialkylfluorene decorated phenothiazine-3-carbaldehyde. J Mol Struct 2017. [DOI: 10.1016/j.molstruc.2016.12.002] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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5
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Viglianti L, Villafiorita-Monteleone F, Botta C, Mussini PR, Ortoleva E, Cauteruccio S, Licandro E, Baldoli C. A Comparative Study of Electrochemical, Spectroscopic and Structural Properties of Phenyl, Thienyl and Furyl Substituted Ethylenes. ChemistrySelect 2017. [DOI: 10.1002/slct.201700109] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Lucia Viglianti
- Dipartimento di Chimica; Università degli Studi di Milano; Via C. Golgi 19 20133 Milano Italy
- The Hong Kong University of Science and Technology; Department of Chemistry; Clear Water Bay, Kowloon Hong Kong China
| | | | - Chiara Botta
- CNR - Istituto per lo Studio delle Macromolecole; Via A. Corti 12 20133 Milano Italy
| | - Patrizia R. Mussini
- Dipartimento di Chimica; Università degli Studi di Milano; Via C. Golgi 19 20133 Milano Italy
| | - Emanuele Ortoleva
- Dipartimento di Chimica; Università degli Studi di Milano; Via C. Golgi 19 20133 Milano Italy
| | - Silvia Cauteruccio
- Dipartimento di Chimica; Università degli Studi di Milano; Via C. Golgi 19 20133 Milano Italy
| | - Emanuela Licandro
- Dipartimento di Chimica; Università degli Studi di Milano; Via C. Golgi 19 20133 Milano Italy
| | - Clara Baldoli
- CNR - Istituto di Scienze e Tecnologie Molecolari; Via C. Golgi 19 20133 Milano Italy
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6
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Stalindurai K, Gokula Krishnan K, Nagarajan ER, Ramalingan C. Experimental and theoretical studies on new 7-(3,6-di-tert-butyl-9H-carbazol-9-yl)-10-alkyl-10H-phenothiazine-3-carbaldehydes. J Mol Struct 2017. [DOI: 10.1016/j.molstruc.2016.11.022] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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7
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Karuppasamy A, Gokula Krishnan K, Pillai Velayutham Pillai M, Ramalingan C. Synthesis, molecular structure and vibrational analysis of D-D-A based carbazole decorated phenothiazine-3-carbaldehyde: Experimental (FT-IR, UV and NMR) and density functional theory (DFT) calculations. J Mol Struct 2017. [DOI: 10.1016/j.molstruc.2016.09.026] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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8
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Privitera A, Righetto M, Mosconi D, Lorandi F, Isse AA, Moretto A, Bozio R, Ferrante C, Franco L. Boosting carbon quantum dots/fullerene electron transfer via surface group engineering. Phys Chem Chem Phys 2016; 18:31286-31295. [DOI: 10.1039/c6cp05981c] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Thiophene functionalization of N-doped carbon quantum dots greatly increases their electron donating capabilities under visible light excitation.
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Affiliation(s)
- Alberto Privitera
- Department of Chemical Sciences
- University of Padova
- 35131 Padova
- Italy
| | - Marcello Righetto
- Department of Chemical Sciences
- University of Padova
- 35131 Padova
- Italy
| | - Dario Mosconi
- Department of Chemical Sciences
- University of Padova
- 35131 Padova
- Italy
| | - Francesca Lorandi
- Department of Chemical Sciences
- University of Padova
- 35131 Padova
- Italy
| | - Abdirisak A. Isse
- Department of Chemical Sciences
- University of Padova
- 35131 Padova
- Italy
| | | | - Renato Bozio
- Department of Chemical Sciences
- University of Padova
- 35131 Padova
- Italy
| | - Camilla Ferrante
- Department of Chemical Sciences
- University of Padova
- 35131 Padova
- Italy
| | - Lorenzo Franco
- Department of Chemical Sciences
- University of Padova
- 35131 Padova
- Italy
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9
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Procopio EQ, Bonometti V, Panigati M, Mercandelli P, Mussini PR, Benincori T, D’Alfonso G, Sannicolò F. Dinuclear Rhenium Complexes as Redox-Active Pendants in a Novel Electrodeposited Polycyclopentadithiophene Material. Inorg Chem 2014; 53:11242-51. [DOI: 10.1021/ic501840p] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
| | - Valentina Bonometti
- Dipartimento
di Chimica, Università degli Studi di Milano, via Golgi
19, 20133 Milano, Italy
| | - Monica Panigati
- Dipartimento
di Chimica, Università degli Studi di Milano, via Golgi
19, 20133 Milano, Italy
- Unità di Ricerca di Milano del Consorzio INSTM, via Golgi 19, 20133 Milano, Italy
| | - Pierluigi Mercandelli
- Dipartimento
di Chimica, Università degli Studi di Milano, via Golgi
19, 20133 Milano, Italy
- Unità di Ricerca di Milano del Consorzio INSTM, via Golgi 19, 20133 Milano, Italy
| | - Patrizia R. Mussini
- Dipartimento
di Chimica, Università degli Studi di Milano, via Golgi
19, 20133 Milano, Italy
- Unità di Ricerca di Milano del Consorzio INSTM, via Golgi 19, 20133 Milano, Italy
- Centro Interdisciplinare Materiali e Interfacce Nanostrutturati, via Celoria 16, 20133 Milano, Italy
| | - Tiziana Benincori
- Dipartimento
di Scienza e Alta Tecnologia, Università degli Studi dell’Insubria, via Valleggio 11, 22100 Como, Italy
| | - Giuseppe D’Alfonso
- Dipartimento
di Chimica, Università degli Studi di Milano, via Golgi
19, 20133 Milano, Italy
- Unità di Ricerca di Milano del Consorzio INSTM, via Golgi 19, 20133 Milano, Italy
| | - Francesco Sannicolò
- Dipartimento
di Chimica, Università degli Studi di Milano, via Golgi
19, 20133 Milano, Italy
- Centro Interdisciplinare Materiali e Interfacce Nanostrutturati, via Celoria 16, 20133 Milano, Italy
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10
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Goswami S, Wicks G, Rebane A, Schanze KS. Photophysics and non-linear absorption of Au(i) and Pt(ii) acetylide complexes of a thienyl-carbazole chromophore. Dalton Trans 2014; 43:17721-8. [DOI: 10.1039/c4dt02123a] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
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11
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Data P, Zassowski P, Lapkowski M, Domagala W, Krompiec S, Flak T, Penkala M, Swist A, Soloducho J, Danikiewicz W. Electrochemical and spectroelectrochemical comparison of alternated monomers and their copolymers based on carbazole and thiophene derivatives. Electrochim Acta 2014. [DOI: 10.1016/j.electacta.2013.11.167] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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12
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Thériault KD, Sutherland TC. Optical and electrochemical properties of ethynylaniline derivatives of phenothiazine, phenothiazine-5-oxide and phenothiazine-5,5-dioxide. Phys Chem Chem Phys 2014; 16:12266-74. [DOI: 10.1039/c4cp00678j] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
Modifications in the sulfur oxidation state of phenothiazine results in dramatic changes to the excited-state geometry with little effect on the HOMO energy.
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Affiliation(s)
- Kim D. Thériault
- Department of Chemistry
- University of Calgary
- Calgary Alberta, Canada
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13
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Bolzoni A, Viglianti L, Bossi A, Mussini PR, Cauteruccio S, Baldoli C, Licandro E. Synthesis, Photophysics, and Electrochemistry of Tetra(2-thienyl)ethylene (TTE) Derivatives. European J Org Chem 2013. [DOI: 10.1002/ejoc.201300745] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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14
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Modulating the electronic properties of asymmetric push–pull and symmetric Zn(II)-diarylporphyrinates with para substituted phenylethynyl moieties in 5,15 meso positions: A combined electrochemical and spectroscopic investigation. Electrochim Acta 2012. [DOI: 10.1016/j.electacta.2012.08.039] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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15
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Sengul IF, Wood K, Kumar N, Black DS. Synthesis of macrocyclic systems derived from di-(2-indolyl)heteroarenes. Tetrahedron 2012. [DOI: 10.1016/j.tet.2012.08.063] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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16
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Jordan AN, Das S, Siraj N, de Rooy SL, Li M, El-Zahab B, Chandler L, Baker GA, Warner IM. Anion-controlled morphologies and spectral features of cyanine-based nanoGUMBOS--an improved photosensitizer. NANOSCALE 2012; 4:5031-5038. [PMID: 22766774 DOI: 10.1039/c2nr30432e] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
The ability to control the morphologies and spectral properties of organic low-dimensional nanomaterials is of paramount importance. The research reported herein demonstrates a template-free approach to tailored morphological and optical properties for a novel class of pseudoisocyanine (PIC)-based fluorescent organic nanoparticles derived from a group of uniform materials based on organic salts (GUMBOS). The synthesized nanoscale PIC-based particles (termed nanoGUMBOS), [PIC][NTf(2)] and [PIC][BETI], exhibit interesting adaptability as a function of the associated anion. The diamond-shaped nanostructures of [PIC][NTf(2)] and [PIC][BETI] nanorods exhibit enhanced fluorescence quantum yields relative to the parent compound, [PIC][I]. As supported by fluorescence lifetime measurements, these enhanced spectral properties can be attributed to differences in molecular self-assembly ordering (e.g., H- vs. J-aggregation) and restricted molecular rotation leading to reduced twisted intramolecular charge transfer in the nanoGUMBOS. The electrochemical properties of the PIC-based GUMBOS suggest their potential use in dye-sensitized solar cells.
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Affiliation(s)
- Atiya N Jordan
- Department of Chemistry, Louisiana State University, Baton Rouge, LA, USA
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Liu TA, Prabhakar C, Yu JY, Chen CH, Huang HH, Yang JS. Star-Shaped Oligothiophenes Containing an Isotruxene Core: Synthesis, Electronic Properties, Electropolymerization, and Film Morphology. Macromolecules 2012. [DOI: 10.1021/ma300576x] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Ting-An Liu
- Department
of Chemistry, National Taiwan University, Taipei, Taiwan 10617
| | - Ch. Prabhakar
- Department
of Chemistry, National Taiwan University, Taipei, Taiwan 10617
| | - Jian-Yuan Yu
- Department
of Chemistry, National Taiwan University, Taipei, Taiwan 10617
| | - Chun-hsien Chen
- Department
of Chemistry, National Taiwan University, Taipei, Taiwan 10617
| | - Hsin-Hau Huang
- Department
of Chemistry, National Taiwan University, Taipei, Taiwan 10617
| | - Jye-Shane Yang
- Department
of Chemistry, National Taiwan University, Taipei, Taiwan 10617
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