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SARS-CoV-2 detection enabled by a portable and label-free photoelectrochemical genosensor using graphitic carbon nitride and gold nanoparticles. Electrochim Acta 2023; 451:142271. [PMID: 36974119 PMCID: PMC10024957 DOI: 10.1016/j.electacta.2023.142271] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2023] [Accepted: 03/16/2023] [Indexed: 03/28/2023]
Abstract
Fast, sensitive, simple, and cheap sensors are highly desirable to be applied in the health system because they improve point-of-care diagnostics, which can reduce the number of cases of infection or even deaths. In this context, here we report the development of a label-free genosensor using a screen-printed electrode modified with 2D-carbonylated graphitic carbon nitride (c-g-C3N4), poly(diallyldimethylammonium) chloride (PDDA), and glutathione-protected gold nanoparticles (GSH-AuNPs) for photoelectrochemical (PEC) detection of SARS-CoV-2. We also made use of Arduino and 3D printing to miniaturize the sensor device. The electrode surface was characterized by AFM and SEM techniques, and the gold nanoparticles by UV–Vis spectrophotometry. For SARS-CoV-2 detection, capture probe DNA was immobilized on the electrode surface. The hybridization of the final genosensor was tested with a synthetic single-strand DNA target and with natural saliva samples using the photoelectrochemistry method. The device presented a linear range from 1 to 10,000 fmol L−1 and a limit of detection of 2.2 and 3.4 fmol L−1 using cpDNA 1A and 3A respectively. The sensibility and accuracy found for the genosensor using cpDNA 1A using biological samples were 93.3 and 80% respectively, indicating the potential of the label-free and portable genosensor to detect SARS-CoV-2 RNA in saliva samples.
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Bakhshandeh F, Saha S, Sen P, Sakib S, MacLachlan R, Kanji F, Osman E, Soleymani L. A universal bacterial sensor created by integrating a light modulating aptamer complex with photoelectrochemical signal readout. Biosens Bioelectron 2023; 235:115359. [PMID: 37187062 DOI: 10.1016/j.bios.2023.115359] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2023] [Revised: 04/05/2023] [Accepted: 04/26/2023] [Indexed: 05/17/2023]
Abstract
Photoelectrochemical (PEC) signal transduction is of great interest for ultrasensitive biosensing; however, signal-on PEC assays that do not require target labeling remain elusive. In this work, we developed a signal-on biosensor that uses nucleic acids to modulate PEC currents upon target capture. Target presence removes a biorecognition probe from a DNA duplex carrying a gold nanoparticle, bringing the gold nanoparticle in direct contact to the photoelectrode and increasing the PEC current. This assay was used to develop a universal bacterial detector by targeting peptidoglycan using an aptamer, demonstrating a limit-of-detection of 82 pg/mL (13 pM) in buffer and 239 pg/mL (37 pM) in urine for peptidoglycan and 1913 CFU/mL forEscherichia coliin urine. When challenged with a panel of unknown targets, the sensor identified samples with bacterial contamination versus fungi. The versatility of the assay was further demonstrated by analyzing DNA targets, which yielded a limit-of-detection of 372 fM.
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Affiliation(s)
- Fatemeh Bakhshandeh
- Department of Engineering Physics, 1280 Main Street West, L8S 4L8, Hamilton, Ontario, Canada
| | - Sudip Saha
- School of Biomedical Engineering, 1280 Main Street West, L8S 4L8, Hamilton, Ontario, Canada
| | - Payel Sen
- Department of Engineering Physics, 1280 Main Street West, L8S 4L8, Hamilton, Ontario, Canada
| | - Sadman Sakib
- Department of Engineering Physics, 1280 Main Street West, L8S 4L8, Hamilton, Ontario, Canada
| | - Roderick MacLachlan
- Department of Engineering Physics, 1280 Main Street West, L8S 4L8, Hamilton, Ontario, Canada
| | - Farhaan Kanji
- Department of Engineering Physics, 1280 Main Street West, L8S 4L8, Hamilton, Ontario, Canada
| | - Enas Osman
- School of Biomedical Engineering, 1280 Main Street West, L8S 4L8, Hamilton, Ontario, Canada
| | - Leyla Soleymani
- Department of Engineering Physics, 1280 Main Street West, L8S 4L8, Hamilton, Ontario, Canada; School of Biomedical Engineering, 1280 Main Street West, L8S 4L8, Hamilton, Ontario, Canada; Michael G. DeGroote Institute for Infectious Disease Research, 1280 Main Street West, L8S 4L8, Hamilton, Ontario, Canada.
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CRISPR/Cas12a-based MUSCA-PEC strategy for HSV-1 assay. Anal Chim Acta 2023; 1250:340955. [PMID: 36898814 DOI: 10.1016/j.aca.2023.340955] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2022] [Revised: 01/13/2023] [Accepted: 02/07/2023] [Indexed: 02/10/2023]
Abstract
In the photoelectrochemical sensing, constant potential excitation to get the photoelectrochemical signal is the main excitation signal mode. Novel method for photoelectrochemical signal obtaining is needed. Inspired by this ideal, a photoelectrochemical strategy for Herpes simplex virus (HSV-1) detection with multiple potential step chronoamperometry (MUSCA) pattern was fabricated using CRISPR/Cas12a cleavage coupled with entropy-driven target recycling. In the presence of target, HSV-1, the Cas12a was activated by the H1-H2 complex obtained by entropy-driven, then digesting the circular fragment of csRNA to expose single-stranded crRNA2 and alkaline phosphatase (ALP). The inactive Cas12a was self-assembled with crRNA2 and activated again with the help of assistant dsDNA. After multiple rounds of CRISPR/Cas12a cleavage and magnetic separation, MUSCA, as a signal amplifier, collected the enhanced photocurrent responses generated by catalyzed p-Aminophenol (p-AP). Different from the reported signal enhancement strategies based on photoactive nanomaterials and sensing mechanisms, MUSCA technique endowed the strategy with unique advantages of direct, fast and ultrasensitive. A superior detection limit of 3 aM toward HSV-1 was achieved. This strategy was successfully applied for HSV-1 detection in Human serum samples. The combination of MUSCA technique and CRISPR/Cas12a assay brings broader potential prospect for the detection of nucleic acids.
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