Dynamics of soil N2O emissions and functional gene abundance in response to biochar application in the presence of earthworms

The interaction between biochar and earthworms: Revealing the potential ecological risks of biochar application and the feasibility of their co-application

Biochar's interaction with soil-dwelling organisms, particularly earthworms, is crucial in ensuring the effective and secure utilization of biochar in the soil. This review introduces the application of biochar in soil, summarizes how earthworms respond to biochar-amended soil and the underlying factors that can influence their response, discusses the synergistic and antagonistic impacts of earthworm activity on the efficacy of biochar, and considers the feasibility of applying them together. A review of existing research has identified uncertainty in the effect of biochar exposure on earthworms, with biochar derived from animal wastes, produced at higher pyrolysis temperatures, and used at higher doses of biochar having more negative effects on earthworms. Habitat modification, toxicity release, particle effects, and contaminant immobilization are underlying factors in how biochar affects earthworm indicators. While biochar in contaminated soils may alleviate the stress of pollutants on earthworms by decreasing their bioaccumulation, this remedial effect is not always effective. Additionally, earthworm bioturbation can enhance the migration, fragmentation, and oxidation of biochar, while also stimulating extracellular enzymes that convert biochar into 'vermichar'. Earthworms and biochar can synergize well to improve soil fertility and remediate soil organic pollution, yet exhibit contrasting roles in soil C sequestration and immobilizing heavy metals in soil. These findings highlight both the advantages and risks of their co-application. Therefore, when considering the use of biochar alone or with earthworms, it is crucial to thoroughly assess its potential ecotoxicity on earthworms and other soil organisms, as well as the influence of bioturbation, such as that caused by earthworms, on the effectiveness of biochar.

Cadmium and pyrene in the soil modify the properties of earthworm-mediated soil

Earthworms are pivotal in soil ecosystems due to their crucial role in shaping soil characteristics through casts and burrow walls. Previous research has predominantly focused on the direct impact of soil pollution on live earthworms, overlooking the subsequent effects on earthworm-mediated soil, such as casts and burrow walls. Using 2D-terraria as incubation containers and the geophagous earthworm species Metaphire guillelmi, this study assessed the change in various properties of earthworm-mediated soil in both uncontaminated soils and Cd- and Pye-contaminated soils. Overall, both Cd and Pye overall improved the ammonium nitrogen (NH4+-N), Olsen's phosphorus (Olsen-P) levels, and invertase and catalase activities while decreasing catalase activities in earthworm-mediated soil. They also fluctuating affected the pH, soil organic matter (SOM) content, soil urease, alkaline phosphatase activities, and microbial functional genes in the cast and burrow walls. These results indicated that earthworms remained crucial "ecosystem engineers" even in polluted soil. Additionally, differences were observed in the responses of properties between casts and burrow walls, showing unequal contributions of transit-through-gut and burrowing processes to soil modification. Specifically, transit-through-gut was found to have a more significant influence on soil NH4+-N and Olsen-P content compared to burrowing behavior. Regarding the pattern of microbial functional genes in earthworm-associated compartments, results revealed that they differed significantly in casts from those in bulk soil and burrow walls under unpolluted conditions, with pollution-enhancing disparities among compartments. Furthermore, NH4+-N and Olsen-P content, urease, and catalase activities in burrow walls and/or casts were identified as potential biomarkers for soil pollution, exhibiting a clear dose-effect relationship. Developing such biomarkers could address ethical concerns related to conventional earthworm biomarkers that require sacrificing earthworms. This study provides insights into the consequences of soil pollution on earthworm-mediated soil components, highlighting the importance of considering the indirect effects of contaminants on soil ecosystems.

Biochar amendment affects the microbial genetic profile of the soil, its community structure and phospholipid fatty acid contents

Biochar (BC) amendment has been proposed as a promising strategy for mitigating greenhouse gas (GHG) emissions, specifically carbon dioxide (CO2), methane (CH4), and nitrous oxide (N2O). Conducting a meta-analysis to evaluate the impact of biochar on microbial genetic profile, community structure, and phospholipid fatty acid (PLFA) contents can aid in identifying key microbial groups involved in GHG production and consumption, and assessing the overall effectiveness of biochar in reducing GHG emissions. The present meta-analysis revealed that the addition of biochar resulted in a 22 % and 41 % reduction in pmoA and mcrA genes of methanogenic microorganisms, respectively. The mcrA/pmoA ratio significantly increased by 81 %. Gene abundances exhibited a positive response to biochar amendment, with increases observed in nifH, nirK, nirS, nosZ, and nosZ (nirS + nirK) genes by 13 %, 32 %, 37 %, 42 %, and 79 %, respectively. Moreover, biochar amendment influenced the microbial community structure accordingly. The concentration of PLFAs increased in response to BC treatment in the following order: A-bacteria (+49 %) < Fungi (+30 %) < Gram-pb (+21 %) < G-bacteria (+17 %) < Gram-nb (+11 %). These findings indicate that biochar amendment shapes the microbial community structure, further emphasizing its significance in enhancing soil fertility.

Cattle manure hydrochar posed a higher efficiency in elevating tomato productivity and decreasing greenhouse gas emissions than plant straw hydrochar in a coastal soil

Rehabilitation of degraded soil health using high-performance and sustainable measures are urgently required for restoring soil primary productivity and mitigating greenhouse gas (GHG) emission of coastal ecosystems. However, the effect of livestock manure derived hydrochar on GHG emission and plant productivity in the coastal salt-affected soils, one of blue carbon (C) ecosystems, was poorly understood. Therefore, a cattle manure hydrochar (CHC) produced at 220 °C was prepared to explore its effects and mechanisms on CH4 and N2O emissions and tomato growth and fruit quality in a coastal soil in comparison with corresponding hydrochars derived from plant straws, i.e., sesbania straw hydrochars (SHC) and reed straw hydrochars (RHC) using a 63-day soil column experiment. The results showed that CHC posed a greater efficiency in reducing the global warming potential (GWP, 54.6 % (36.7 g/m2) vs. 45.5-45.6 % (22.2-30.6 g/m2)) than those of RHC and SHC. For the plant growth, three hydrochars at 3 % (w/w) significantly increased dry biomass of tomato shoot and fruit by 12.4-49.5 % and 48.6-165 %, respectively. Moreover, CHC showed the highest promotion effect on shoot and fruit dry biomass of tomato, followed by SHC ≈ RHC. Application of SHC, CHC and RHC significantly elevated the tomato sweetness compared with CK, with the order of CHC (54.4 %) > RHC (35.6 %) > SHC (22.1 %). Structural equation models revealed that CHC-depressed denitrification and methanogen mainly contributed to decreased GHG emissions. Increased soil phosphorus availability due to labile phosphorus supply from CHC dominantly accounted for elevated tomato growth and fruit production. Comparably, SHC-altered soil properties (e.g., decreased pH and increased total carbon content) determined variations of GHG emission and tomato growth. The findings provide the high-performance strategies to enhance soil primary productivity and mitigate GHG emissions in the blue C ecosystems.

Can the co-application of biochar and different inorganic nitrogen fertilizers repress N2O emissions in acidic soil?

The sole application of nitrogen (N) fertilizer with lower N2O emission potential or combined with biochar may help for mitigating N2O production. However, how biochar applied with various inorganic N fertilizers affected N2O emission in acidic soil remains unclear. Thus, we examined N2O emission, soil N dynamics and relating nitrifiers (i.e., ammonia-oxidizing archaea, AOA) in acidic soil. The study contained three N fertilizers (including NH4Cl, NaNO3, NH4NO3) and two biochar application rates (i.e., 0% and 0.5%). The results indicated that the alone application of NH4Cl produced more N2O. Meanwhile, the co-application of biochar and N fertilizers enhanced N2O emission as well, especially in the combined treatment of biochar and NH4NO3. Soil pH was decreased with the application of various N fertilizers, especially with NH4Cl, and the average decrease rate was 9.6%. Meanwhile, correlation analysis showed a negative relationship between N2O and pH, dramatically, which might indicate that the alteration of pH was one factor relating to N2O emission. However, there was no difference between the same N addition treatments with or without biochar on pH. Interestingly, in the combined treatment of biochar and NH4NO3, the lowest net nitrification rate and net mineralization rate appeared during days 16-23. Meanwhile, the highest emission rate of N2O in the same treatment also appeared during days 16-23. The accordance might indicate that N transformation alteration was another factor relating to N2O emissions. In addition, compared to NH4NO3 alone application, co-applied with biochar had a lower content of Nitrososphaera-AOA, which was a main contributor to nitrification. The study emphasizes the importance of using a suitable form of N fertilizers and further indicates that two factors, namely alteration of pH and N transformation rate, are related to N2O emission. Moreover, in future studies, it is necessary to explore the soil N dynamics controlled by microorganisms.

Immediate response of paddy soil microbial community and structure to moisture changes and nitrogen fertilizer application

Water and fertilizer managements are the most common practices to maximize crop yields, and their long-term impact on soil microbial communities has been extensively studied. However, the initial response of microbes to fertilization and soil moisture changes remains unclear. In this study, the immediate effects of nitrogen (N)-fertilizer application and moisture levels on microbial community of paddy soils were investigated through controlled incubation experiments. Amplicon sequencing results revealed that moisture had a stronger influence on the abundance and community composition of total soil bacteria, as well as ammonia oxidizing-archaea (AOA) and -bacteria (AOB). Conversely, fertilizer application noticeably reduced the connectivity and complexity of the total bacteria network, and increasing moisture slightly exacerbated these effects. NH4+-N content emerged as a significant driving force for changes in the structure of the total bacteria and AOB communities, while NO3--N content played more important role in driving shifts in AOA composition. These findings indicate that the initial responses of microbial communities, including abundance and composition, and network differ under water and fertilizer managements. By providing a snapshot of microbial community structure following short-term N-fertilizer and water treatments, this study contributes to a better understanding of how soil microbes respond to long-term agriculture managements.

Straw incorporation interacting with earthworms mitigates N2O emissions from upland soil in a rice-wheat rotation system

Intensive attentions have been paid to the positive effects on nitrous oxide (N₂O) production under straw return or the presence of earthworms. Straw return as a sustainable practice can promote earthworm growth, how the interactions between straw and earthworms affect N₂O production is still not well known. A split-plot field experiment (straw return as main plot and earthworm addition as subplot) was performed to quantify the interactive effects of straw and earthworm on N₂O emissions from a wheat field and to determine the underlying mechanisms from nitrification and denitrification processes. The results showed that straw return significantly increased N₂O emissions by 41.0 % under no earthworm addition but decreased it by 19.0 % under earthworm addition compared with straw removal (P < 0.05). The significant interaction between straw and earthworm benefits the mitigation of N₂O emissions. Random forest model showed that denitrification and nitrification were dominant processes to affect N₂O emissions at the jointing and booting growth stages of wheat, respectively. The interaction between straw and earthworm significantly decreased the abundances of N₂O-producing bacterial genes such as nirS and nirK at the jointing stages, and AOB at the booting stages. The contrasting mechanisms in regulating N₂O emissions at different growth stages should be considered in nitrogen recycling models to accurately predict available N and N₂O dynamics. Our findings suggest that N₂O emissions under straw return can be weakened with the increasing earthworm populations under the scenario of widely used conservation practices (e.g., straw return and no-till) due to significant interaction between straw and earthworms.

Interactive effects of microplastics, biochar, and earthworms on CO2 and N2O emissions and microbial functional genes in vegetable-growing soil

Soil carbon dioxide (CO₂) and nitrous oxide (N₂O) emissions are two main greenhouse gases that play important roles in global warming. Studies have shown that microplastics, biochar, and earthworms can significantly affect soil greenhouse gas emissions. However, few studies have explored how their interactions affect soil CO₂ and N₂O emissions. A mesocosm experiment was conducted to investigate their interactive effects on soil greenhouse gases and soil microbial functional genes in vegetable-growing soil under different incubation times. Biochar alone or combined with microplastics significantly decreased soil CO₂ emissions but had no effect on soil N₂O emissions. Microplastics and biochar inhibited CO₂ emissions and promoted N₂O emissions in the soil with earthworms. The addition of microplastics, biochar, and earthworms had significant effects on soil chemical properties, including dissolved organic carbon, ammonia nitrogen, nitrate nitrogen, total nitrogen, and pH. Microplastics and earthworms selectively influenced microbial abundances and led to a fungi-prevalent soil microbial community, while biochar led to a bacteria-prevalent microbial community. The interactions of microplastics, biochar, and earthworms could alleviate the reduction of the bacteria-to-fungi ratio and the abundance of microbial functional genes caused by microplastics and earthworms alone. Microplastics significantly inhibited microorganisms as well as C and N cycling functional genes in earthworm guts, while biochar obviously stimulated them. The influence of the addition of exogenous material on soil greenhouse gas emissions, soil chemical properties, and functional microbes differed markedly with soil incubation time. Our results indicated that biochar is a promising amendment for soil with microplastics or earthworms to simultaneously mitigate CO₂ emissions and regulate soil microbial community composition and function. These findings contribute to a better understanding of the interaction effects of microplastics, biochar, and earthworms on soil carbon and nitrogen cycles, which could be used to help conduct sustainable environmental management of soil.

Nitrogen and Biochar Addition Affected Plant Traits and Nitrous Oxide Emission From Cinnamomum camphora

Atmospheric nitrous oxide (N₂O) increase contributes substantially to global climate change due to its large global warming potential. Soil N₂O emissions have been widely studied, but plants have so far been ignored, even though they are known as an important source of N₂O. The specific objectives of this study are to (1) reveal the effects of nitrogen and biochar addition on plant functional traits and N₂O emission of Cinnamomum camphora seedlings; (2) find out the possible leaf traits affecting plant N₂O emissions. The effects of nitrogen and biochar on plant functional traits and N₂O emissions from plants using C. camphora seedlings were investigated. Plant N₂O emissions, growth, each organ biomass, each organ nutrient allocation, gas exchange parameters, and chlorophyll fluorescence parameters of C. camphora seedlings were measured. Further investigation of the relationships between plant N₂O emission and leaf traits was performed by simple linear regression analysis, principal component analysis (PCA), and structural equation model (SEM). It was found that nitrogen addition profoundly increased cumulative plant N₂O emissions (+109.25%), which contributed substantially to the atmosphere's N₂O budget in forest ecosystems. Plant N₂O emissions had a strong correlation to leaf traits (leaf TN, P _n , G _s , C _i , Tr, WUE _L , α, ETR _max, I _k , Fv/Fm, Y(II), and SPAD). Structural equation modelling revealed that leaf TN, leaf TP, P _n , C _i , Tr, WUE _L , α, ETR _max, and I _k were key traits regulating the effects of plants on N₂O emissions. These results provide a direction for understanding the mechanism of N₂O emission from plants and provide a theoretical basis for formulating corresponding emission reduction schemes.

Commonwealth of Soil Health: How Do Earthworms Modify the Soil Microbial Responses to CeO2 Nanoparticles?

Soil ecotoxicological assays on nanoparticles (NPs) have mainly investigated single components (e.g., plants, fauna, and microbes) within the ecosystem, neglecting possible effects resulting from the disturbance of the interactions between these components. Here, we investigated soil microbial responses to CeO₂ NPs in the presence and absence of earthworms from the perspectives of microbial functions (i.e., enzyme activities), the community structure, and soil metabolite profiles. Exposure to CeO₂ NPs (50, 500 mg/kg) alone decreased the activities of enzymes (i.e., acid protease and acid phosphatase) participating in soil N and P cycles, while the presence of earthworms ameliorated these inhibitory effects. After the CeO₂ NP exposure, the earthworms significantly altered the relative abundance of some microbes associated with the soil N and P cycles (Flavobacterium, Pedobacter, Streptomyces, Bacillus, Bacteroidota, Actinobacteria, and Firmicutes). This was consistent with the pattern found in the significantly changed metabolites which were also involved in the microbial N and P metabolism. Both CeO₂ NPs and earthworms changed the soil bacterial community and soil metabolite profiles. Larger alterations of soil bacteria and metabolites were found under CeO₂ NP exposure with earthworms. Overall, our study indicates that the top-down control of earthworms can drastically modify the microbial responses to CeO₂ NPs from all studied biological aspects. This clearly shows the importance of the holistic consideration of all soil ecological components to assess the environmental risks of NPs to soil health.

Biochar modulates mineral nitrogen dynamics in soil and terrestrial ecosystems: A critical review

Biochar, over the last two decades, has become the focal point of agro-environmental research given its unique functionality, cost-effectiveness and recyclability potentials. It has been studied intensively as an efficient scavenger for the decontamination of several organic and inorganic pollutants. However, the ability of biochar to modulate nitrogen (N) dynamics in soil and terrestrial ecosystems remains controversial. This work deliberates on the premise that biochar functionality enables maximizing N use efficiency by reducing the potential losses induced by volatilization/emission and runoff/leaching as well as stimulating available N inputs derived from symbiotic and nonsymbiotic biological nitrogen fixation (BNF) and N mineralization/retention. For this purpose, we carried out a critical review on different intriguing dimensions surrounding the potentiality of biochar to modulate the complicated reactions of soil N cycle with emphasis on its pros and cons. Previous studies in the literature have shown contradictory results with a noticeable significant effect of biochar toward stimulating available N inputs and reducing its losses under short-term laboratory experimentations. However, long-term field investigations have indicated minimal or negative effects in this regard. Furthermore, some of the experimentations lack appropriate controls or fail to account for inputs or losses associated with biochar particles. It is thus of great importance to contextualise lab-scale experimentations based on real field data to provide a holistic approach for understanding the complicated reactions responsible for modulating N cycle in the charosphere. Additionally, biochar functionalization should be highlighted in the foreseeable research to develop fit-for-purpose forms tailored in agro-environmental applications.