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Brough HA, Cheneler D, Hardy JG. Progress in Multiscale Modeling of Silk Materials. Biomacromolecules 2024; 25:6987-7014. [PMID: 39438248 PMCID: PMC11558682 DOI: 10.1021/acs.biomac.4c01122] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2024] [Revised: 09/28/2024] [Accepted: 10/03/2024] [Indexed: 10/25/2024]
Abstract
As a result of their hierarchical structure and biological processing, silk fibers rank among nature's most remarkable materials. The biocompatibility of silk-based materials and the exceptional mechanical properties of certain fibers has inspired the use of silk in numerous technical and medical applications. In recent years, computational modeling has clarified the relationship between the molecular architecture and emergent properties of silk fibers and has demonstrated predictive power in studies on novel biomaterials. Here, we review advances in modeling the structure and properties of natural and synthetic silk-based materials, from early structural studies of silkworm cocoon fibers to cutting-edge atomistic simulations of spider silk nanofibrils and the recent use of machine learning models. We explore applications of modeling across length scales: from quantum mechanical studies on model peptides, to atomistic and coarse-grained molecular dynamics simulations of silk proteins, to finite element analysis of spider webs. As computational power and algorithmic efficiency continue to advance, we expect multiscale modeling to become an indispensable tool for understanding nature's most impressive fibers and developing bioinspired functional materials.
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Affiliation(s)
- Harry
D. A. Brough
- Department
of Chemistry, Lancaster University, Lancaster LA1 4YB, United Kingdom
| | - David Cheneler
- School
of Engineering, Lancaster University, Lancaster LA1 4YW, United Kingdom
- Materials
Science Lancaster, Lancaster University, Lancaster, LA1 4YW, United Kingdom
| | - John G. Hardy
- Department
of Chemistry, Lancaster University, Lancaster LA1 4YB, United Kingdom
- Materials
Science Lancaster, Lancaster University, Lancaster, LA1 4YW, United Kingdom
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2
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Peng X, Liu Z, Gao J, Zhang Y, Wang H, Li C, Lv X, Gao Y, Deng H, Zhao B, Gao T, Li H. Influence of Spider Silk Protein Structure on Mechanical and Biological Properties for Energetic Material Detection. Molecules 2024; 29:1025. [PMID: 38474537 PMCID: PMC10934110 DOI: 10.3390/molecules29051025] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2024] [Revised: 02/21/2024] [Accepted: 02/22/2024] [Indexed: 03/14/2024] Open
Abstract
Spider silk protein, renowned for its excellent mechanical properties, biodegradability, chemical stability, and low immune and inflammatory response activation, consists of a core domain with a repeat sequence and non-repeating sequences at the N-terminal and C-terminal. In this review, we focus on the relationship between the silk structure and its mechanical properties, exploring the potential applications of spider silk materials in the detection of energetic materials.
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Affiliation(s)
- Xinying Peng
- Toxicology Research Center, Institute for Hygiene of Ordnance Industry, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China (Z.L.)
- Xi’an Key Laboratory of Toxicology and Biological Effects, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China
| | - Zhiyong Liu
- Toxicology Research Center, Institute for Hygiene of Ordnance Industry, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China (Z.L.)
- Xi’an Key Laboratory of Toxicology and Biological Effects, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China
| | - Junhong Gao
- Toxicology Research Center, Institute for Hygiene of Ordnance Industry, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China (Z.L.)
- Xi’an Key Laboratory of Toxicology and Biological Effects, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China
| | - Yuhao Zhang
- Toxicology Research Center, Institute for Hygiene of Ordnance Industry, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China (Z.L.)
- Xi’an Key Laboratory of Toxicology and Biological Effects, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China
| | - Hong Wang
- Toxicology Research Center, Institute for Hygiene of Ordnance Industry, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China (Z.L.)
- Xi’an Key Laboratory of Toxicology and Biological Effects, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China
| | - Cunzhi Li
- Toxicology Research Center, Institute for Hygiene of Ordnance Industry, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China (Z.L.)
- Xi’an Key Laboratory of Toxicology and Biological Effects, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China
| | - Xiaoqiang Lv
- Toxicology Research Center, Institute for Hygiene of Ordnance Industry, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China (Z.L.)
- Xi’an Key Laboratory of Toxicology and Biological Effects, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China
| | - Yongchao Gao
- Toxicology Research Center, Institute for Hygiene of Ordnance Industry, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China (Z.L.)
- Xi’an Key Laboratory of Toxicology and Biological Effects, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China
| | - Hui Deng
- Toxicology Research Center, Institute for Hygiene of Ordnance Industry, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China (Z.L.)
- Xi’an Key Laboratory of Toxicology and Biological Effects, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China
| | - Bin Zhao
- Toxicology Research Center, Institute for Hygiene of Ordnance Industry, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China (Z.L.)
- Xi’an Key Laboratory of Toxicology and Biological Effects, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China
| | - Ting Gao
- Toxicology Research Center, Institute for Hygiene of Ordnance Industry, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China (Z.L.)
- Xi’an Key Laboratory of Toxicology and Biological Effects, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China
| | - Huan Li
- Toxicology Research Center, Institute for Hygiene of Ordnance Industry, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China (Z.L.)
- Xi’an Key Laboratory of Toxicology and Biological Effects, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China
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3
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Chen Z, Song J, Xia Y, Jiang Y, Murillo LL, Tsigkou O, Wang T, Li Y. High strength and strain alginate fibers by a novel wheel spinning technique for knitting stretchable and biocompatible wound-care materials. MATERIALS SCIENCE & ENGINEERING. C, MATERIALS FOR BIOLOGICAL APPLICATIONS 2021; 127:112204. [PMID: 34225856 DOI: 10.1016/j.msec.2021.112204] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2021] [Revised: 04/27/2021] [Accepted: 05/18/2021] [Indexed: 02/07/2023]
Abstract
Alginate fibrous materials have been applied as wound dressing to enhance wound healing due to its nontoxic, biodegradable, and hemostatic nature. Conventional nonwoven fabrication tactics, however, showed weakness in inflammation, degradation stability and mechanical properties. Herein, the wet-spun alginate fibers were prepared by a novel wheel spinning technique, then knitted into wound dressing. Benefiting from optimized wet spinning parameters and the agglomeration of alginate multimers, the fibers were endowed with elevated mechanical performances and biodegradability, which allowed for the feasibility of knitting wound-care materials. Using the new wheel spinning technique, high strength alginate fibers with 173 MPa were produced with breaking strain up to 18% and toughness of 16.16 MJ*m-3. Meanwhile, alginate fibers with high breaking strain reaching 35% were produced with tensile strength of 135 MPa and toughness of 37.47 MJ*m-3. The overall mechanical performances of these alginate fibers with high breaking strain are significantly higher (up to 2 times) than those published in the literature in term of toughness. In vitro degradation evaluation revealed that this wet spun fibrous dressing had good aqueous absorbency (50%) and sustained biodegradation properties. Furthermore, the consequent cell viability study also proved that this alginate knitted fabric is biocompatible for being applied as wound dressing.
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Affiliation(s)
- Zhongda Chen
- Department of Materials, The University of Manchester, Manchester M13 9PL, UK
| | - Jun Song
- Department of Materials, The University of Manchester, Manchester M13 9PL, UK
| | - Yumin Xia
- Department of Materials, The University of Manchester, Manchester M13 9PL, UK
| | - Yuwei Jiang
- Department of Materials, The University of Manchester, Manchester M13 9PL, UK
| | - Luis Larrea Murillo
- Division of Evolution and Genomic Sciences, The University of Manchester, Manchester M13 9PL, UK
| | - Olga Tsigkou
- Department of Materials, The University of Manchester, Manchester M13 9PL, UK
| | - Tao Wang
- Division of Evolution and Genomic Sciences, The University of Manchester, Manchester M13 9PL, UK
| | - Yi Li
- Department of Materials, The University of Manchester, Manchester M13 9PL, UK.
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4
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Montanero JM, Gañán-Calvo AM. Dripping, jetting and tip streaming. REPORTS ON PROGRESS IN PHYSICS. PHYSICAL SOCIETY (GREAT BRITAIN) 2020; 83:097001. [PMID: 32647097 DOI: 10.1088/1361-6633/aba482] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Dripping, jetting and tip streaming have been studied up to a certain point separately by both fluid mechanics and microfluidics communities, the former focusing on fundamental aspects while the latter on applications. Here, we intend to review this field from a global perspective by considering and linking the two sides of the problem. First, we present the theoretical model used to study interfacial flows arising in droplet-based microfluidics, paying attention to three elements commonly present in applications: viscoelasticity, electric fields and surfactants. We review both classical and current results of the stability of jets affected by these elements. Mechanisms leading to the breakup of jets to produce drops are reviewed as well, including some recent advances in this field. We also consider the relatively scarce theoretical studies on the emergence and stability of tip streaming in open systems. Second, we focus on axisymmetric microfluidic configurations which can operate on the dripping and jetting modes either in a direct (standard) way or via tip streaming. We present the dimensionless parameters characterizing these configurations, the scaling laws which allow predicting the size of the resulting droplets and bubbles, as well as those delimiting the parameter windows where tip streaming can be found. Special attention is paid to electrospray and flow focusing, two of the techniques more frequently used in continuous drop production microfluidics. We aim to connect experimental observations described in this section of topics with fundamental and general aspects described in the first part of the review. This work closes with some prospects at both fundamental and practical levels.
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Affiliation(s)
- J M Montanero
- Depto. de Ingeniería Mecánica, Energética y de los Materiales and Instituto de Computación Científica Avanzada (ICCAEx), Universidad de Extremadura, E-06006 Badajoz, Spain
| | - A M Gañán-Calvo
- Depto. de Ingeniería Aeroespacial y Mecánica de Fluidos, Universidad de Sevilla, E-41092 Sevilla, Spain
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5
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Pérez-Rigueiro J, Madurga R, Gañán-Calvo AM, Elices M, Guinea GV, Tasei Y, Nishimura A, Matsuda H, Asakura T. Emergence of supercontraction in regenerated silkworm (Bombyx mori) silk fibers. Sci Rep 2019; 9:2398. [PMID: 30787337 PMCID: PMC6382804 DOI: 10.1038/s41598-019-38712-6] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2018] [Accepted: 12/17/2018] [Indexed: 12/01/2022] Open
Abstract
The conditions required for the emergence of supercontraction in regenerated silkworm (Bombyx mori) silk fibers are assessed through an experimental approach that combines the spinning of regenerated fibers with controlled properties and their characterization by 13C solid-state nuclear magnetic resonance (NMR). Both supercontracting and non-supercontracting regenerated fibers are produced using the straining flow spinning (SFS) technique from 13C labeled cocoons. The short-range microstructure of the fibers is assessed through 13C CP/MAS in air and 13C DD/MAS in water, and the main microstructural features are identified and quantified. The mechanical properties of the regenerated fibers and their microstructures are compared with those of natural silkworm silk. The combined analysis highlights two possible key elements as responsible for the emergence of supercontraction: (1) the existence of an upper and a lower limit of the amorphous phase compatible with supercontraction, and (2) the existence of two ordered phases, β-sheet A and B, which correspond to different packing arrangements of the protein chains.
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Affiliation(s)
- José Pérez-Rigueiro
- Centro de Tecnología Biomédica, Universidad Politécnica de Madrid, 28223, Pozuelo de Alarcón, (Madrid), Spain. .,Departamento de Ciencia de Materiales, ETSI Caminos, Canales y Puertos, Universidad Politécnica de Madrid, 28040, Madrid, Spain. .,Biomedical Research Networking Center in Bioengineering, Biomaterials and Nanomedicine (CIBER-BBN), Madrid, Spain.
| | - Rodrigo Madurga
- Centro de Tecnología Biomédica, Universidad Politécnica de Madrid, 28223, Pozuelo de Alarcón, (Madrid), Spain.,Departamento de Ciencia de Materiales, ETSI Caminos, Canales y Puertos, Universidad Politécnica de Madrid, 28040, Madrid, Spain
| | - Alfonso M Gañán-Calvo
- Escuela Técnica Superior de Ingenieros, Universidad de Sevilla, 41092, Sevilla, Spain
| | - Manuel Elices
- Centro de Tecnología Biomédica, Universidad Politécnica de Madrid, 28223, Pozuelo de Alarcón, (Madrid), Spain.,Departamento de Ciencia de Materiales, ETSI Caminos, Canales y Puertos, Universidad Politécnica de Madrid, 28040, Madrid, Spain
| | - Gustavo V Guinea
- Centro de Tecnología Biomédica, Universidad Politécnica de Madrid, 28223, Pozuelo de Alarcón, (Madrid), Spain.,Departamento de Ciencia de Materiales, ETSI Caminos, Canales y Puertos, Universidad Politécnica de Madrid, 28040, Madrid, Spain.,Biomedical Research Networking Center in Bioengineering, Biomaterials and Nanomedicine (CIBER-BBN), Madrid, Spain
| | - Yugo Tasei
- Department of Biotechnology, Tokyo University of Agriculture and Technology, 2-24-16 Nakacho, Koganei, Tokyo, 184-8588, Japan
| | - Akio Nishimura
- Department of Biotechnology, Tokyo University of Agriculture and Technology, 2-24-16 Nakacho, Koganei, Tokyo, 184-8588, Japan
| | - Hironori Matsuda
- Department of Biotechnology, Tokyo University of Agriculture and Technology, 2-24-16 Nakacho, Koganei, Tokyo, 184-8588, Japan
| | - Tetsuo Asakura
- Department of Biotechnology, Tokyo University of Agriculture and Technology, 2-24-16 Nakacho, Koganei, Tokyo, 184-8588, Japan.
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6
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Magaz A, Roberts AD, Faraji S, Nascimento TRL, Medeiros ES, Zhang W, Greenhalgh RD, Mautner A, Li X, Blaker JJ. Porous, Aligned, and Biomimetic Fibers of Regenerated Silk Fibroin Produced by Solution Blow Spinning. Biomacromolecules 2018; 19:4542-4553. [PMID: 30387602 DOI: 10.1021/acs.biomac.8b01233] [Citation(s) in RCA: 45] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Solution blow spinning (SBS) has emerged as a rapid and scalable technique for the production of polymeric and ceramic materials into micro-/nanofibers. Here, SBS was employed to produce submicrometer fibers of regenerated silk fibroin (RSF) from Bombyx mori (silkworm) cocoons based on formic acid or aqueous systems. Spinning in the presence of vapor permitted the production of fibers from aqueous solutions, and high alignment could be obtained by modifying the SBS setup to give a concentrated channeled airflow. The combination of SBS and a thermally induced phase separation technique (TIPS) resulted in the production of macro-/microporous fibers with 3D interconnected pores. Furthermore, a coaxial SBS system enabled a pH gradient and kosmotropic salts to be applied at the point of fiber formation, mimicking some of the aspects of the natural spinning process, fostering fiber formation by self-assembly of the spinning dope. This scalable and fast production of various types of silk-based fibrous scaffolds could be suitable for a myriad of biomedical applications.
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Affiliation(s)
- Adrián Magaz
- Bio-Active Materials Group, School of Materials , The University of Manchester , Manchester , United Kingdom.,Institute of Materials Research and Engineering (IMRE) , Agency for Science, Technology and Research (A*STAR) , Singapore
| | - Aled D Roberts
- Bio-Active Materials Group, School of Materials , The University of Manchester , Manchester , United Kingdom
| | - Sheida Faraji
- Bio-Active Materials Group, School of Materials , The University of Manchester , Manchester , United Kingdom
| | - Tatiana R L Nascimento
- Laboratory of Materials and Biosystems, Department of Materials Engineering , Universidade Federal da Paraíba , João Pessoa , Brazil
| | - Eliton S Medeiros
- Laboratory of Materials and Biosystems, Department of Materials Engineering , Universidade Federal da Paraíba , João Pessoa , Brazil
| | - Wenzhao Zhang
- Bio-Active Materials Group, School of Materials , The University of Manchester , Manchester , United Kingdom
| | - Ryan D Greenhalgh
- Bio-Active Materials Group, School of Materials , The University of Manchester , Manchester , United Kingdom
| | - Andreas Mautner
- Polymer and Composite Engineering Group, Institute of Materials Chemistry and Research , University of Vienna , Vienna , Austria
| | - Xu Li
- Institute of Materials Research and Engineering (IMRE) , Agency for Science, Technology and Research (A*STAR) , Singapore.,Department of Chemistry , National University of Singapore , Singapore
| | - Jonny J Blaker
- Bio-Active Materials Group, School of Materials , The University of Manchester , Manchester , United Kingdom
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7
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Hoffmann B, Gruat-Henry C, Mulinti P, Jiang L, Brooks BD, Brooks AE. Using hydrodynamic focusing to predictably alter the diameter of synthetic silk fibers. PLoS One 2018; 13:e0195522. [PMID: 29649239 PMCID: PMC5896967 DOI: 10.1371/journal.pone.0195522] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2017] [Accepted: 03/23/2018] [Indexed: 01/21/2023] Open
Abstract
Spiders and silkworms provide a model of superior processing for multifunctional and highly versatile high-performance fibers. Mimicking the spider's complex control system for chemical and mechanical gradients has remained an ongoing obstacle for synthetic silk production. In this study, the use of hydrodynamic fluid focusing within a 3D printed biomimetic spinning system to recapitulate the biological spinneret is explored and shown to produce predictable, small diameter fibers. Mirroring in silico fluid flow simulations using a hydrodynamic microfluidic spinning technique, we have developed a model correlating spinning rates, solution viscosity and fiber diameter outputs that will significantly advance the field of synthetic silk fiber production. The use of hydrodynamic focusing to produce controlled output fiber diameter simulates the natural silk spinning process and continues to build upon a 3D printed biomimetic spinning platform.
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Affiliation(s)
- Bradley Hoffmann
- Department of Mechanical Engineering, North Dakota State University, Fargo, North Dakota, United States of America
| | - Catherine Gruat-Henry
- Department of Electrical Engineering, North Dakota State University, Fargo, North Dakota, United States of America
| | - Pranothi Mulinti
- Department of Pharmaceutical Sciences, North Dakota State University, Fargo, North Dakota, United States of America
| | - Long Jiang
- Department of Mechanical Engineering, North Dakota State University, Fargo, North Dakota, United States of America
| | - Benjamin D. Brooks
- Department of Electrical Engineering, North Dakota State University, Fargo, North Dakota, United States of America
| | - Amanda E. Brooks
- Department of Pharmaceutical Sciences, North Dakota State University, Fargo, North Dakota, United States of America
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