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Yu P, Yan X, Hong J, Li D, Xiong F, Bai R, Yang J, Guo L. Geographical origins of Angelica sinensis using functional compounds and multielement with machine learning-based fusion approaches. Food Chem 2025; 471:142747. [PMID: 39788002 DOI: 10.1016/j.foodchem.2024.142747] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2024] [Revised: 12/16/2024] [Accepted: 12/31/2024] [Indexed: 01/12/2025]
Abstract
Ensuring food traceability is essential for maintaining safety and authenticity. Angelica sinensis (Oliv.) Diels (AS), a medicinal food prized for its rich nutritional value and tonic effects, is frequently vulnerable to geographic origin fraud. In this study, 16 functional compounds and 40 multielement were utilized to investigate the regional characteristics and the geographical origins authentication of AS samples from 8 different origins. Three algorithms were introduced, and the K-nearest neighbors (KNN) model constructed by the second-level fusion using 22 key variables screened by VIP features performed the best for AS origin classification, with a prediction accuracy of 100.00 % in both the training set and the testing set. Moreover, 5 environmental factors, including longitude, latitude, cation exchange capacity, accumulated temperature of growing degree days above 5 °C and dry or moisture index, were identified as the primary influenced environmental factors.
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Affiliation(s)
- Ping Yu
- State Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs, Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing 100700, PR China; Key Laboratory of Biology and Cultivation of Herb Medicine, Ministry of Agriculture and Rural Affairs, Beijing 100700, PR China
| | - Xinwei Yan
- State Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs, Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing 100700, PR China
| | - Jiashun Hong
- Evaluation and Research Center of Daodi Herbs of Jiangxi Province, Ganjiang New District 330000, PR China
| | - Daocheng Li
- Evaluation and Research Center of Daodi Herbs of Jiangxi Province, Ganjiang New District 330000, PR China
| | - Feng Xiong
- State Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing 100700, PR China; Key Laboratory of Biology and Cultivation of Herb Medicine, Ministry of Agriculture and Rural Affairs, Beijing 100700, PR China
| | - Ruibin Bai
- State Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing 100700, PR China; Key Laboratory of Biology and Cultivation of Herb Medicine, Ministry of Agriculture and Rural Affairs, Beijing 100700, PR China; Evaluation and Research Center of Daodi Herbs of Jiangxi Province, Ganjiang New District 330000, PR China
| | - Jian Yang
- State Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing 100700, PR China; Key Laboratory of Biology and Cultivation of Herb Medicine, Ministry of Agriculture and Rural Affairs, Beijing 100700, PR China; Evaluation and Research Center of Daodi Herbs of Jiangxi Province, Ganjiang New District 330000, PR China.
| | - Lanping Guo
- State Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs, Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing 100700, PR China; Key Laboratory of Biology and Cultivation of Herb Medicine, Ministry of Agriculture and Rural Affairs, Beijing 100700, PR China.
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Zhang W, Pan M, Wang P, Xue J, Zhou X, Sun W, Hu Y, Shen Z. Comparative Analysis of XGB, CNN, and ResNet Models for Predicting Moisture Content in Porphyra yezoensis Using Near-Infrared Spectroscopy. Foods 2024; 13:3023. [PMID: 39410057 PMCID: PMC11475958 DOI: 10.3390/foods13193023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2024] [Revised: 09/17/2024] [Accepted: 09/18/2024] [Indexed: 10/20/2024] Open
Abstract
This study explored the performance and reliability of three predictive models-extreme gradient boosting (XGB), convolutional neural network (CNN), and residual neural network (ResNet)-for determining the moisture content in Porphyra yezoensis using near-infrared (NIR) spectroscopy. We meticulously selected 380 samples from various sources to ensure a comprehensive dataset, which was then divided into training (300 samples) and test sets (80 samples). The models were evaluated based on prediction accuracy and stability, employing genetic algorithms (GA) and partial least squares (PLS) for wavelength selection to enhance the interpretability of feature extraction outcomes. The results demonstrated that the XGB model excelled with a determination coefficient (R2) of 0.979, a root mean square error of prediction (RMSEP) of 0.004, and a high ratio of performance to deviation (RPD) of 4.849, outperforming both CNN and ResNet models. A Gaussian process regression (GPR) was employed for uncertainty assessment, reinforcing the reliability of our models. Considering the XGB model's high accuracy and stability, its implementation in industrial settings for quality assurance is recommended, particularly in the food industry where rapid and non-destructive moisture content analysis is essential. This approach facilitates a more efficient process for determining moisture content, thereby enhancing product quality and safety.
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Affiliation(s)
- Wenwen Zhang
- Haide College, Ocean University of China, Qingdao 266003, China;
| | - Mingxuan Pan
- Jiangsu Coast Development Group Co., Ltd., Nanjing 210019, China; (M.P.); (J.X.); (X.Z.); (Y.H.)
| | - Peng Wang
- College of Food Science and Engineering, Ocean University of China, Qingdao 266003, China; (P.W.); (W.S.)
| | - Jiao Xue
- Jiangsu Coast Development Group Co., Ltd., Nanjing 210019, China; (M.P.); (J.X.); (X.Z.); (Y.H.)
| | - Xinghu Zhou
- Jiangsu Coast Development Group Co., Ltd., Nanjing 210019, China; (M.P.); (J.X.); (X.Z.); (Y.H.)
| | - Wenke Sun
- College of Food Science and Engineering, Ocean University of China, Qingdao 266003, China; (P.W.); (W.S.)
| | - Yadong Hu
- Jiangsu Coast Development Group Co., Ltd., Nanjing 210019, China; (M.P.); (J.X.); (X.Z.); (Y.H.)
| | - Zhaopeng Shen
- College of Food Science and Engineering, Ocean University of China, Qingdao 266003, China; (P.W.); (W.S.)
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Liu B, Zhang H, Zhu J, Chen Y, Pan Y, Gong X, Yan J, Zhang H. Pixel-Level Recognition of Trace Mycotoxins in Red Ginseng Based on Hyperspectral Imaging Combined with 1DCNN-Residual-BiLSTM-Attention Model. SENSORS (BASEL, SWITZERLAND) 2024; 24:3457. [PMID: 38894248 PMCID: PMC11174722 DOI: 10.3390/s24113457] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2024] [Revised: 04/21/2024] [Accepted: 05/24/2024] [Indexed: 06/21/2024]
Abstract
Red ginseng is widely used in food and pharmaceuticals due to its significant nutritional value. However, during the processing and storage of red ginseng, it is susceptible to grow mold and produce mycotoxins, generating security issues. This study proposes a novel approach using hyperspectral imaging technology and a 1D-convolutional neural network-residual-bidirectional-long short-term memory attention mechanism (1DCNN-ResBiLSTM-Attention) for pixel-level mycotoxin recognition in red ginseng. The "Red Ginseng-Mycotoxin" (R-M) dataset is established, and optimal parameters for 1D-CNN, residual bidirectional long short-term memory (ResBiLSTM), and 1DCNN-ResBiLSTM-Attention models are determined. The models achieved testing accuracies of 98.75%, 99.03%, and 99.17%, respectively. To simulate real detection scenarios with potential interfering impurities during the sampling process, a "Red Ginseng-Mycotoxin-Interfering Impurities" (R-M-I) dataset was created. The testing accuracy of the 1DCNN-ResBiLSTM-Attention model reached 96.39%, and it successfully predicted pixel-wise classification for other unknown samples. This study introduces a novel method for real-time mycotoxin monitoring in traditional Chinese medicine, with important implications for the on-site quality control of herbal materials.
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Affiliation(s)
- Biao Liu
- College of Pharmaceutical Science, Zhejiang University of Technology, No. 18, Chaowang Road, Hangzhou 310014, China; (B.L.); (H.Z.); (J.Z.); (Y.C.); (Y.P.)
| | - Hongxu Zhang
- College of Pharmaceutical Science, Zhejiang University of Technology, No. 18, Chaowang Road, Hangzhou 310014, China; (B.L.); (H.Z.); (J.Z.); (Y.C.); (Y.P.)
| | - Jieqiang Zhu
- College of Pharmaceutical Science, Zhejiang University of Technology, No. 18, Chaowang Road, Hangzhou 310014, China; (B.L.); (H.Z.); (J.Z.); (Y.C.); (Y.P.)
| | - Yuan Chen
- College of Pharmaceutical Science, Zhejiang University of Technology, No. 18, Chaowang Road, Hangzhou 310014, China; (B.L.); (H.Z.); (J.Z.); (Y.C.); (Y.P.)
| | - Yixia Pan
- College of Pharmaceutical Science, Zhejiang University of Technology, No. 18, Chaowang Road, Hangzhou 310014, China; (B.L.); (H.Z.); (J.Z.); (Y.C.); (Y.P.)
| | - Xingchu Gong
- Pharmaceutical Informatics Institute, College of Pharmaceutical Sciences, Zhejiang University, Hangzhou 310058, China;
| | - Jizhong Yan
- College of Pharmaceutical Science, Zhejiang University of Technology, No. 18, Chaowang Road, Hangzhou 310014, China; (B.L.); (H.Z.); (J.Z.); (Y.C.); (Y.P.)
| | - Hui Zhang
- College of Pharmaceutical Science, Zhejiang University of Technology, No. 18, Chaowang Road, Hangzhou 310014, China; (B.L.); (H.Z.); (J.Z.); (Y.C.); (Y.P.)
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Bai R, Zhou J, Wang S, Zhang Y, Nan T, Yang B, Zhang C, Yang J. Identification and Classification of Coix seed Storage Years Based on Hyperspectral Imaging Technology Combined with Deep Learning. Foods 2024; 13:498. [PMID: 38338633 PMCID: PMC10855119 DOI: 10.3390/foods13030498] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2023] [Revised: 01/29/2024] [Accepted: 02/01/2024] [Indexed: 02/12/2024] Open
Abstract
Developing a fast and non-destructive methodology to identify the storage years of Coix seed is important in safeguarding consumer well-being. This study employed the utilization of hyperspectral imaging (HSI) in conjunction with conventional machine learning techniques such as support vector machines (SVM), k-nearest neighbors (KNN), random forest (RF), extreme gradient boosting (XGBoost), as well as the deep learning method of residual neural network (ResNet), to establish identification models for Coix seed samples from different storage years. Under the fusion-based modeling approach, the model's classification accuracy surpasses that of visible to near infrared (VNIR) and short-wave infrared (SWIR) spectral modeling individually. The classification accuracy of the ResNet model and SVM exceeds that of other conventional machine learning models (KNN, RF, and XGBoost). Redundant variables were further diminished through competitive adaptive reweighted sampling feature wavelength screening, which had less impact on the model's accuracy. Upon validating the model's performance using an external validation set, the ResNet model yielded more satisfactory outcomes, exhibiting recognition accuracy exceeding 85%. In conclusion, the comprehensive results demonstrate that the integration of deep learning with HSI techniques effectively distinguishes Coix seed samples from different storage years.
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Affiliation(s)
- Ruibin Bai
- State Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing 100700, China; (R.B.); (J.Z.); (S.W.); (Y.Z.); (T.N.); (B.Y.)
| | - Junhui Zhou
- State Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing 100700, China; (R.B.); (J.Z.); (S.W.); (Y.Z.); (T.N.); (B.Y.)
| | - Siman Wang
- State Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing 100700, China; (R.B.); (J.Z.); (S.W.); (Y.Z.); (T.N.); (B.Y.)
| | - Yue Zhang
- State Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing 100700, China; (R.B.); (J.Z.); (S.W.); (Y.Z.); (T.N.); (B.Y.)
| | - Tiegui Nan
- State Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing 100700, China; (R.B.); (J.Z.); (S.W.); (Y.Z.); (T.N.); (B.Y.)
| | - Bin Yang
- State Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing 100700, China; (R.B.); (J.Z.); (S.W.); (Y.Z.); (T.N.); (B.Y.)
| | - Chu Zhang
- School of Information Engineering, Huzhou University, Huzhou 313000, China
| | - Jian Yang
- State Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing 100700, China; (R.B.); (J.Z.); (S.W.); (Y.Z.); (T.N.); (B.Y.)
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