Using DNA-barcoding to make the necrobiont beetle family Cholevidae accessible for forensic entomology

Long-term insect successional patterns on pig carcasses in central Spain

Baseline data on the insect successional patterns on carcasses can be a valuable estimation tool in the investigations of suspicious deaths, particularly when the post-mortem interval is longer than months or years. However, although carrion insect succession is a recurrent topic in forensic science research, the duration of the published studies is typically shorter than 1 year, with only one published study from central Europe documenting successional patterns beyond the first year of decomposition. We provide here the first data on the long-term insect successional patterns in southern Europe, using pig carcasses exposed in the four seasons of the year and documenting the carrion entomofauna during the second and third year of decomposition. Our results confirmed previous observations from central Europe that several Coleoptera species are able to recolonize cadavers during the second and third year after death, with their larvae residing on the remains for long periods. The season of cadaver exposure appears to be a main factor determining the composition of the insect fauna that exploits the remains during subsequent years. Our results suggest that it might be possible to estimate the year and season of death analyzing the composition of the insect fauna occurring on a cadaver. The present data highlight the need for further studies on the long-term insect succession on cadavers in different seasons and geographical areas, in order to fully understand its patterns and ensure its proper application in PMI estimations.

DNA Barcoding in Forensic Entomology - Establishing a DNA Reference Library of Potentially Forensic Relevant Arthropod Species

Throughout the years, DNA barcoding has gained in importance in forensic entomology as it leads to fast and reliable species determination. High-quality results, however, can only be achieved with a comprehensive DNA barcode reference database at hand. In collaboration with the Bavarian State Criminal Police Office, we have initiated at the Bavarian State Collection of Zoology the establishment of a reference library containing arthropods of potential forensic relevance to be used for DNA barcoding applications. CO1-5P' DNA barcode sequences of hundreds of arthropods were obtained via DNA extraction, PCR and Sanger Sequencing, leading to the establishment of a database containing 502 high-quality sequences which provide coverage for 88 arthropod species. Furthermore, we demonstrate an application example of this library using it as a backbone to a high throughput sequencing analysis of arthropod bulk samples collected from human corpses, which enabled the identification of 31 different arthropod Barcode Index Numbers.

The evolution of asymmetric genitalia in Coleoptera

The evolution of asymmetry in male genitalia is a pervasive and recurrent phenomenon across almost the entire animal kingdom. Although in some taxa the asymmetry may be a response to the evolution of one-sided, male-above copulation from a more ancestral female-above condition, in other taxa, such as Mammalia and Coleoptera, this explanation appears insufficient. We carried out an informal assessment of genital asymmetry across the Coleoptera and found that male genital asymmetry is present in 43% of all beetle families, and at all within-family taxonomic levels. In the most diverse group, Cucujiformia, however, genital asymmetry is comparatively rare. We also reconstructed the phylogeny of the leiodid tribe Cholevini, and mapped aspects of genital asymmetry on the tree, revealing that endophallus sclerites, endophallus, median lobe and parameres are, in a nested fashion, increasingly unlikely to have evolved asymmetry. We interpret these results in the light of cryptic female choice versus sexually antagonistic coevolution and advocate further ways in which the phenomenon may be better understood.

This article is part of the themed issue ‘Provocative questions in left–right asymmetry’.

DNA extraction and barcode identification of development stages of forensically important flies in the Czech Republic

Several methods of DNA extraction, coupled with 'DNA barcoding' species identification, were compared using specimens from early developmental stages of forensically important flies from the Calliphoridae and Sarcophagidae families. DNA was extracted at three immature stages - eggs, the first instar larvae, and empty pupal cases (puparia) - using four different extraction methods, namely, one simple 'homemade' extraction buffer protocol and three commercial kits. The extraction conditions, including the amount of proteinase K and incubation times, were optimized. The simple extraction buffer method was successful for half of the eggs and for the first instar larval samples. The DNA Lego Kit and DEP-25 DNA Extraction Kit were useful for DNA extractions from the first instar larvae samples, and the DNA Lego Kit was also successful regarding the extraction from eggs. The QIAamp DNA mini kit was the most effective; the extraction was successful with regard to all sample types - eggs, larvae, and pupari.

Thermal summation model and instar determination of all developmental stages of necrophagous beetle, Sciodrepoides watsoni (Spence) (Coleoptera: Leiodidae: Cholevinae)

Necrophagous beetles are underrepresented in forensic entomology studies despite their undeniable utility for the field. In the present article, information is presented regarding the developmental biology and instar determination of Sciodrepoides watsoni (Spence, 1813), a very common species occurring across the Holarctic region. Wild collected beetles were kept in climate chambers at constant temperature (12, 15, 18, 21 and 28 °C) and their development was regularly documented. Parameters of thermal summation models and standard errors were calculated for each developmental stage. These models may be used for an estimation of post-mortem interval in legal investigations after further validation on local populations of S. watsoni. An additional methodology is introduced for future studies of size-based characteristics, addressing instar identification bias. The methodology provided estimations (mean, standard error and standard deviation) of S. watsoni larval head capsule width for preliminary larval instar determination. The methodology may be used with other morphological features to improve instar determination accuracy.

The use of COI barcodes for molecular identification of forensically important fly species in Germany

Deoxyribonucleic acid (DNA)-based insect identification has become a routine and accurate tool in forensic entomology. In the present study, we demonstrate the utility of the mitochondrial DNA cytochrome oxidase I gene "barcoding region" as a universal marker for molecular identification of forensically important Diptera. We analyzed 111 specimens belonging to 13 species originating from Frankfurt am Main, Germany (Calliphoridae: Calliphora vicina, Calliphora vomitoria, Lucilia ampullacea, Lucilia caesar, Lucilia illustris, Lucilia sericata, Lucilia silvarum, Phormia regina, Protophormia terraenovae; Piophilidae: Parapiophila vulgaris; Muscidae: Hydrotaea dentipes, Hydrotaea ignava, Hydrotaea similis). Intraspecific variation ranged from 0 to 1.17% and interspecific variation occurred between 1.17% and 15.21%. Although differences within species were generally less than among species, divergence percentages overlapped due to low interspecific nucleotide divergence of the recently separated sister species L. caesar and L. illustris. However, all species formed distinct monophyletic clades and thus the cytochrome oxidase 1 (COI) barcode has been shown suitable for clear differentiation and identification of forensically relevant Diptera in Germany.