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Dubskikh VA, Kolosov AA, Lysova AA, Samsonenko DG, Lavrov AN, Kovalenko KA, Dybtsev DN, Fedin VP. A Series of Metal-Organic Frameworks with 2,2'-Bipyridyl Derivatives: Synthesis vs. Structure Relationships, Adsorption, and Magnetic Studies. Molecules 2023; 28:molecules28052139. [PMID: 36903384 PMCID: PMC10004071 DOI: 10.3390/molecules28052139] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2023] [Revised: 02/16/2023] [Accepted: 02/22/2023] [Indexed: 03/03/2023] Open
Abstract
Five new metal-organic frameworks based on Mn(II) and 2,2'-bithiophen-5,5'-dicarboxylate (btdc2-) with various chelating N-donor ligands (2,2'-bipyridyl = bpy; 5,5'-dimethyl-2,2'-bipyridyl = 5,5'-dmbpy; 4,4'-dimethyl-2,2'-bipyridyl = 4,4'-dmbpy) [Mn3(btdc)3(bpy)2]·4DMF, 1; [Mn3(btdc)3(5,5'-dmbpy)2]·5DMF, 2; [Mn(btdc)(4,4;-dmbpy)], 3; [Mn2(btdc)2(bpy)(dmf)]·0.5DMF, 4; [Mn2(btdc)2(5,5'-dmbpy)(dmf)]·DMF, 5 (dmf, DMF = N,N-dimethylformamide) have been synthesized, and their crystal structure has been established using single-crystal X-ray diffraction analysis (XRD). The chemical and phase purities of Compounds 1-3 have been confirmed via powder X-ray diffraction, thermogravimetric, and chemical analyses as well as IR spectroscopy. The influence of the bulkiness of the chelating N-donor ligand on the dimensionality and structure of the coordination polymer has been analyzed, and the decrease in the framework dimensionality, as well as the secondary building unit's nuclearity and connectivity, has been observed for bulkier ligands. For three-dimensional (3D) coordination polymer 1, the textural and gas adsorption properties have been studied, revealing noticeable ideal adsorbed solution theory (IAST) CO2/N2 and CO2/CO selectivity factors (31.0 at 273 K and 19.1 at 298 K and 25.7 at 273 K and 17.0 at 298 K, respectively, for the equimolar composition and the total pressure of 1 bar). Moreover, significant adsorption selectivity for binary C2-C1 hydrocarbons mixtures (33.4 and 24.9 for C2H6/CH4, 24.8 and 17.7 for C2H4/CH4, 29.3 and 19.1 for C2H2/CH4 at 273 K and 298 K, respectively, for the equimolar composition and the total pressure of 1 bar) has been observed, making it possible to separate on 1 natural, shale, and associated petroleum gas into valuable individual components. The ability of Compound 1 to separate benzene and cyclohexane in a vapor phase has also been analyzed based on the adsorption isotherms of individual components measured at 298 K. The preferable adsorption of C6H6 over C6H12 by 1 at high vapor pressures (VB/VCH = 1.36) can be explained by the existence of multiple van der Waals interactions between guest benzene molecules and the metal-organic host revealed by the XRD analysis of 1 immersed in pure benzene for several days (1≅2C6H6). Interestingly, at low vapor pressures, an inversed behavior of 1 with preferable adsorption of C6H12 over C6H6 (KCH/KB = 6.33) was observed; this is a very rare phenomenon. Moreover, magnetic properties (the temperature-dependent molar magnetic susceptibility, χp(T) and effective magnetic moments, μeff(T), as well as the field-dependent magnetization, M(H)) have been studied for Compounds 1-3, revealing paramagnetic behavior consistent with their crystal structure.
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Affiliation(s)
- Vadim A. Dubskikh
- Nikolaev Institute of Inorganic Chemistry, Siberian Branch of the Russian Academy of Sciences, Novosibirsk 630090, Russia
| | - Aleksei A. Kolosov
- Nikolaev Institute of Inorganic Chemistry, Siberian Branch of the Russian Academy of Sciences, Novosibirsk 630090, Russia
- Department of Natural Sciences, Novosibirsk State University, Novosibirsk 630090, Russia
| | - Anna A. Lysova
- Nikolaev Institute of Inorganic Chemistry, Siberian Branch of the Russian Academy of Sciences, Novosibirsk 630090, Russia
- Correspondence: (A.A.L.); (D.N.D.)
| | - Denis G. Samsonenko
- Nikolaev Institute of Inorganic Chemistry, Siberian Branch of the Russian Academy of Sciences, Novosibirsk 630090, Russia
| | - Alexander N. Lavrov
- Nikolaev Institute of Inorganic Chemistry, Siberian Branch of the Russian Academy of Sciences, Novosibirsk 630090, Russia
| | - Konstantin A. Kovalenko
- Nikolaev Institute of Inorganic Chemistry, Siberian Branch of the Russian Academy of Sciences, Novosibirsk 630090, Russia
| | - Danil N. Dybtsev
- Nikolaev Institute of Inorganic Chemistry, Siberian Branch of the Russian Academy of Sciences, Novosibirsk 630090, Russia
- Correspondence: (A.A.L.); (D.N.D.)
| | - Vladimir P. Fedin
- Nikolaev Institute of Inorganic Chemistry, Siberian Branch of the Russian Academy of Sciences, Novosibirsk 630090, Russia
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Dubskikh VA, Lysova AA, Samsonenko DG, Dorovatovskii PV, Lazarenko VA, Dybtsev DN, Fedin VP. VARIETY OF METAL-ORGANIC FRAMEWORKS BASED ON CADMIUM(II) AND BITHIOPHENEDICARBOXYLIC ACID. J STRUCT CHEM+ 2022. [DOI: 10.1134/s0022476622110130] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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Dubskikh VA, Lysova AA, Samsonenko DG, Lavrov AN, Dybtsev DN, Fedin VP. Coordination Polymers of Ni(II) with Thiophene Ligands: Synthesis, Structures, and Magnetic Properties. RUSS J COORD CHEM+ 2021. [DOI: 10.1134/s107032842110002x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
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Lysova AA, Dubskikh VA, Abasheeva KD, Vasileva AA, Samsonenko DG, Dybtsev DN. Coordination Polymers of Scandium(III) and Thiophenedicarboxylic Acid. RUSS J COORD CHEM+ 2021. [DOI: 10.1134/s1070328421090062] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Abstract
Three new metal−organic frameworks based on scandium(III) cations and 2,5-thiophenedicarboxylic acid (H2Tdc) are synthesized: [Sc(Tdc)(OH)]·1.2DMF (I), [Sc(Tdc)(OH)]·2/3DMF (II), and (Me2NH2)[Sc3(Tdc)4(OH)2]·DMF (III) (DMF is N,N-dimethylformamide). The structures of the compounds are determined by single-crystal X-ray structure analysis (CIF file CCDC nos. 2067819 (I), 2067820 (II), and 2067821 (III)). The chemical and phase purity of compound I is proved by elemental analysis, thermogravimetry, X-ray diffraction analysis, and IR spectroscopy.
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Dubskikh VA, Lysova AA, Samsonenko DG, Lavrov AN, Kovalenko KA, Dybtsev DN, Fedin VP. 3D Metal-Organic Frameworks Based on Co(II) and Bithiophendicarboxylate: Synthesis, Crystal Structures, Gas Adsorption, and Magnetic Properties. Molecules 2021; 26:molecules26051269. [PMID: 33652868 PMCID: PMC7956319 DOI: 10.3390/molecules26051269] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2021] [Revised: 02/17/2021] [Accepted: 02/23/2021] [Indexed: 12/18/2022] Open
Abstract
Three new 3D metal-organic porous frameworks based on Co(II) and 2,2′-bithiophen-5,5′-dicarboxylate (btdc2−) [Co3(btdc)3(bpy)2]·4DMF, 1; [Co3(btdc)3(pz)(dmf)2]·4DMF·1.5H2O, 2; [Co3(btdc)3(dmf)4]∙2DMF∙2H2O, 3 (bpy = 2,2′-bipyridyl, pz = pyrazine, dmf = N,N-dimethylformamide) were synthesized and structurally characterized. All compounds share the same trinuclear carboxylate building units {Co3(RCOO)6}, connected either by btdc2– ligands (1, 3) or by both btdc2– and pz bridging ligands (2). The permanent porosity of 1 was confirmed by N2, O2, CO, CO2, CH4 adsorption measurements at various temperatures (77 K, 273 K, 298 K), resulted in BET surface area 667 m2⋅g−1 and promising gas separation performance with selectivity factors up to 35.7 for CO2/N2, 45.4 for CO2/O2, 20.8 for CO2/CO, and 4.8 for CO2/CH4. The molar magnetic susceptibilities χp(T) were measured for 1 and 2 in the temperature range 1.77–330 K at magnetic fields up to 10 kOe. The room-temperature values of the effective magnetic moments for compounds 1 and 2 are μeff (300 K) ≈ 4.93 μB. The obtained results confirm the mainly paramagnetic nature of both compounds with some antiferromagnetic interactions at low-temperatures T < 20 K in 2 between the Co(II) cations separated by short pz linkers. Similar conclusions were also derived from the field-depending magnetization data of 1 and 2.
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Shi ZQ, Ji NN, Hu HL. One-pot concomitant preparation of two copper(II) coordination polymers with different configurations of bridging bithiophene ligands. ACTA CRYSTALLOGRAPHICA SECTION C-STRUCTURAL CHEMISTRY 2020; 76:37-43. [PMID: 31919306 DOI: 10.1107/s2053229619016024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/01/2019] [Accepted: 11/28/2019] [Indexed: 11/10/2022]
Abstract
By employing the conjugated bithiophene ligand 5,5'-bis(1H-imidazol-1-yl)-2,2'-bithiophene (bibp), which can exhibit trans and cis conformations, two different CuII coordination polymers, namely, poly[[μ-5,5'-bis(1H-imidazol-1-yl)-2,2'-bithiophene-κ2N:N'](μ2-4,4'-oxydibenzoato-κ2O:O')copper(II)], [Cu(C14H8O5)(C14H10N4S2)]n or [Cu(bibp)(oba)]n, (I), and catena-poly[μ-aqua-bis[μ-5,5'-bis(1H-imidazol-1-yl)-2,2'-bithiophene-κ2N:N']bis(μ3-4,4'-oxydibenzoato)-κ3O:O':O'';κ4O:O',O'':O'-dicopper(II)], [Cu2(C14H8O5)2(C14H10N4S2)(H2O)]n or [Cu2(bibp)(oba)2(H2O)]n, (II), have been prepared through one-pot concomitant crystallization and characterized by single-crystal X-ray diffraction, IR spectroscopy, elemental analysis, powder X-ray diffraction (PXRD) and thermogravimetric (TG) analysis. Single-crystal X-ray diffraction indicates that the most interesting aspect of the structure is the existence of sole trans and cis conformations of the bibp ligand in a single net of (I) and (II), respectively. Compound (I) displays a threefold interpenetrating three-dimensional framework with a 4-connected {65.8} cds topology, whereas (II) features a one-dimensional chain structure. In the crystal of (II), the polymeric chains are further extended through C-H...O hydrogen bonds and C-H...π interactions into a three-dimensional supramolecular architecture. In addition, strong intramolecular O-H...O hydrogen bonds formed between the bridging water molecules and the carboxylate O atoms improve the stability of the framework of (II). Furthermore, solid-state UV-Vis spectroscopy experiments show that compounds (I) and (II) exhibit optical band gaps which are characteristic for optical semiconductors, with values of 2.70 and 2.26 eV, respectively.
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Affiliation(s)
- Zhi Qiang Shi
- College of Chemistry and Chemical Engineering, Taishan University, Taian, Shandong 271021, People's Republic of China
| | - Ning Ning Ji
- College of Chemistry and Chemical Engineering, Taishan University, Taian, Shandong 271021, People's Republic of China
| | - Hai Liang Hu
- School of Chemical Engineering, Guizhou Minzu University, Guiyang, Guizhou 550025, People's Republic of China
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Dubskikh VA, Lysova AA, Samsonenko DG, Dybtsev DN, Fedin VP. Topological polymorphism and temperature-driven topotactic transitions of metal–organic coordination polymers. CrystEngComm 2020. [DOI: 10.1039/d0ce01045f] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A facile crystal-to-crystal solid-state phase transition between a low-temperature phase and a high temperature phase changes the MOF topology and involves a significant rearrangement of bulky organic ligands.
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Affiliation(s)
- Vadim A. Dubskikh
- Nikolaev Institute of Inorganic Chemistry, Siberian Branch of the Russian Academy of Sciences
- Novosibirsk
- Russia
| | - Anna A. Lysova
- Nikolaev Institute of Inorganic Chemistry, Siberian Branch of the Russian Academy of Sciences
- Novosibirsk
- Russia
- Novosibirsk State University
- Novosibirsk
| | - Denis G. Samsonenko
- Nikolaev Institute of Inorganic Chemistry, Siberian Branch of the Russian Academy of Sciences
- Novosibirsk
- Russia
- Novosibirsk State University
- Novosibirsk
| | - Danil N. Dybtsev
- Nikolaev Institute of Inorganic Chemistry, Siberian Branch of the Russian Academy of Sciences
- Novosibirsk
- Russia
- Novosibirsk State University
- Novosibirsk
| | - Vladimir P. Fedin
- Nikolaev Institute of Inorganic Chemistry, Siberian Branch of the Russian Academy of Sciences
- Novosibirsk
- Russia
- Novosibirsk State University
- Novosibirsk
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Ullah K, Sirajuddin M, Zubair M, Haider A, Ali S, Ullah F, Dutkiewicz G, Kubicki M, Rizzoli C. Designing of homo and heteroleptic zinc(II) carboxylates: synthesis, spectroscopic characterizations, DNA binding study, CTAB interaction and in vitro antimicrobial evaluations. JOURNAL OF THE IRANIAN CHEMICAL SOCIETY 2019. [DOI: 10.1007/s13738-019-01594-6] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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Ji NN, Shi ZQ, Hu HL. A new Cd II coordination polymer with a self-penetrating architecture induced by the molecular conformation of a rigid bithiophene ligand. ACTA CRYSTALLOGRAPHICA SECTION C-STRUCTURAL CHEMISTRY 2018; 74:218-223. [PMID: 29400338 DOI: 10.1107/s2053229618001006] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/10/2017] [Accepted: 01/17/2018] [Indexed: 11/10/2022]
Abstract
The design and synthesis of coordination polymers with a self-penetrating architecture has attracted much interest not only due to their interesting structures but also due to their potential applications. 5,5'-Bis(pyridin-4-yl)-2,2'-bithiophene (bpbp), as a conjugated bithiophene ligand, can exhibit trans and cis conformations and this can lead to the construction of a self-penetrating architecture. In addition, the semi-rigid ancillary ligand 4,4'-oxybis(benzoic acid) (H2oba) can adopt different coordination modes, resulting in coordination polymers with high-dimensional skeletons. A new CdII coordination polymer based on mixed ligands, namely poly[diaquapentakis[μ-5,5'-bis(pyridin-4-yl)-2,2'-bithiophene-κ2N:N']bis(nitrato-κ2O,O')tetrakis(μ3-4,4'-oxydibenzoato)-κ10O:O,O':O'',O''';κ6O:O':O''-pentacadmium(II)], [Cd5(C14H14O5)4(NO3)2(C18H12N2S2)5(H2O)2]n, (I), has been synthesized under solvothermal conditions and characterized by single-crystal X-ray diffraction, IR spectroscopy and elemental analysis. Single-crystal X-ray diffraction indicates that there are three crystallographically independent CdII cations, three bpbp ligands, two deprotonated oba2- ligands, one nitrate ligand and one coordinated water molecule in the asymmetric unit. One CdII centre is seven-coordinated, exhibiting a distorted {CdN2O5} pentagonal bipyramidal geometry, while the other two Cd centres are both six-coordinated, showing slightly distorted {CdN2O4} octahedral geometries. The most interesting feature is the co-existence of trans and cis conformations in a single net, allowing structural interpenetration via self-threading and yet the expected self-penetrating structure was obtained. Topological analysis shows that the whole three-dimensional framework can be classified as a 3-nodal (4,6,6)-c net with Schläfli symbol {613.82}2{66}, which is a new topology. Furthermore, the luminescence properties of (I) were examined in the solid state at room temperature.
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Affiliation(s)
- Ning Ning Ji
- College of Chemistry and Chemical Engineering, Taishan University, Taian, Shandong 271021, People's Republic of China
| | - Zhi Qiang Shi
- College of Chemistry and Chemical Engineering, Taishan University, Taian, Shandong 271021, People's Republic of China
| | - Hai Liang Hu
- College of Chemical Engineering, Guizhou Institute of Technology, Guiyang, Guizhou 550003, People's Republic of China
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Einkauf JD, Ortega RE, Mathivathanan L, de Lill DT. Nitroaromatic sensing with a new lanthanide coordination polymer [Er2(C10H4O4S2)3(H2O)6]n assembled by 2,2′-bithiophene-5,5′-dicarboxylate. NEW J CHEM 2017. [DOI: 10.1039/c7nj01677h] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A new three dimensional lanthanide-containing coordination polymer assembled from 2,2′-bithiophene-5,5′-dicarboxylic acid ([Ln2(C10H4O4S2)3(H2O)6]n, Ln = Sm–Yb) was solvothermally synthesized and used as a sensor to detect nitroaromatic compounds via luminescence quenching.
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Affiliation(s)
- Jeffrey D. Einkauf
- Department of Chemistry & Biochemistry
- Florida Atlantic University
- Boca Raton
- USA
| | - Raul E. Ortega
- Department of Chemistry & Biochemistry
- Florida Atlantic University
- Boca Raton
- USA
| | | | - Daniel T. de Lill
- Department of Chemistry & Biochemistry
- Florida Atlantic University
- Boca Raton
- USA
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Hu Y, Zhang G, Zhang F. Study of conformation and thermodynamics of α-amylase interaction with ethylene in vitro. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 2016; 163:110-4. [DOI: 10.1016/j.jphotobiol.2016.08.021] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/19/2016] [Accepted: 08/15/2016] [Indexed: 12/18/2022]
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Einkauf JD, Mathivathanan L, de Lill DT. Structural, spectroscopic, and computational studies of [2,2′-bithiophene]-5-carboxylic acid. J Mol Struct 2016. [DOI: 10.1016/j.molstruc.2015.10.004] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Hu JY, Liao CL, Hu LL, Zhang CC, Chen SF, Zhao JA. Group IIB metal directed complexes with flexible benzimidazole-based connector. RUSS J COORD CHEM+ 2015. [DOI: 10.1134/s1070328415030057] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Ali N, Tahir MN, Ali S, Iqbal M, Munawar KS, Perveen S. Synthesis, characterization, crystal structures, enzyme inhibition, DNA binding, and electrochemical studies of zinc(II) complexes. J COORD CHEM 2014. [DOI: 10.1080/00958972.2014.910653] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Affiliation(s)
- Nida Ali
- Department of Chemistry, Quaid-I-Azam University, Islamabad, Pakistan
| | | | - Saqib Ali
- Department of Chemistry, Quaid-I-Azam University, Islamabad, Pakistan
| | - Muhammad Iqbal
- Department of Chemistry, Quaid-I-Azam University, Islamabad, Pakistan
| | | | - Sajida Perveen
- Department of Soil and Environmental Sciences, Agricultural University, Peshawar, Pakistan
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