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Al-Fakeh M, Messaoudi S, Alresheedi F, Albadri A, El-Sayed W, Saleh E. Preparation, Characterization, DFT Calculations, Antibacterial and Molecular Docking Study of Co(II), Cu(II), and Zn(II) Mixed Ligand Complexes. CRYSTALS 2023; 13:118. [DOI: 10.3390/cryst13010118] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/01/2023]
Abstract
In the present work, complexes of cobalt(II), copper(II), and zinc(II), 2-amino-4-methylpyrimidineand, and 2,3-diaminopyridine were successfully prepared and characterized using elemental analysis, UV-visible, and FTIR spectroscopy, as well as magnetic susceptibility measurements, molar conductance, TGA analysis, and X-ray diffraction. From elemental and spectral data, the formulae [M(L1)(L2)Cl2(H2O)] (where L1 = AMPY (2-amino-4-methylpyrimidine) and L2 = DAPY(2,3-diaminopyridine)) and M = Co(II) (2), Cu(II) (2), and Zn(II)) for the metal complexes have been proposed. The geometric structures of the mixed-ligand complexes were found to be octahedral around the metal ions, and the XRD patterns showed monoclinic crystal systems with space group P21. The mode of bonding was pentacoordinate for Cu and hexacoordinate for Zn and Co. Different features may result from the fact that not all molecules have the same electron distribution. For example, Zn and Co have larger electron densities in at least one of the chlorides in the HOMO compared with pentacoordinate Cu, which has a small electron distribution on the chloride. Thermal analysis indicated that all metal complexes are stable up to about 88 °C with thermodynamically favored overlapped chemical reactions. Excellent antibacterial and antifungal activity was shown by the three synthesized forms of the complexes. The Zn(II) complex had a high level of antioxidant activity with a DPPH scavenging of 91.5%, whereas the Cu(II) complex had a low level of antioxidant potential (16.5%). The docking tests also showed that all compounds had good binding energy levels (7.2–7.9 kcal mol−1). For this reason, all molecules can easily fit in the receptor protein’s catalytic sites. However, the Co(II) complex is shown to be more active.
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Affiliation(s)
- Maged Al-Fakeh
- Department of Chemistry, College of Science, Qassim University, Buraidah 51452, Saudi Arabia
- Taiz University, Taiz 3086, Yemen
| | - Sabri Messaoudi
- Department of Chemistry, College of Science, Qassim University, Buraidah 51452, Saudi Arabia
- Faculty of Sciences of Bizerte, Carthage University, Jarzouna 7021, Tunisia
| | - Faisal Alresheedi
- Department of Physics, College of Science, Qassim University, Buraidah 51452, Saudi Arabia
| | - Abuzar Albadri
- Department of Chemistry, College of Science, Qassim University, Buraidah 51452, Saudi Arabia
| | - Wael El-Sayed
- Department of Chemistry, College of Science, Qassim University, Buraidah 51452, Saudi Arabia
- Photochemistry Department, National Research Centre, Cairo 12311, Egypt
| | - Emran Saleh
- Physics Department, Faculty of Science, University of Aden 6312, Yemen
- Physics Department, Faculty of Science, Ain Shams University, Cairo 11566, Egypt
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Bhunia A, Zangrando E, Khatua S, Manna SC. Synthesis, crystal structure, electrochemistry and thermal analysis of an oxalato bridged Cr(III)-Pb(II) heterometallic coordination compound. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.133562] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Yao W, Zhang ZY, Xu BT, Yu XL, Li XY, Fedin VP, Gao EJ. SYNTHESIS, CRYSTAL STRUCTURE AND ELECTROCHEMISTRY PROPERTIES OF Cu-COMPOUND BY RIGID LIGAND. J STRUCT CHEM+ 2022. [DOI: 10.1134/s0022476622080121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Ltaief H, Mahroug A, Belhouchet M. Crystal structure, Hirshfeld surface analysis and physicochemical studies of a new copper coordination polymer with 3,3’-diaminodiphenylsulfone as ligand. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2021.131236] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
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Ni(II), Cu(II), Mn(II), and Fe(II) Metal Complexes Containing 1,3-Bis(diphenylphosphino)propane and Pyridine Derivative: Synthesis, Characterization, and Antimicrobial Activity. Int J Biomater 2021; 2021:4981367. [PMID: 34335775 PMCID: PMC8292072 DOI: 10.1155/2021/4981367] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2021] [Revised: 05/20/2021] [Accepted: 06/29/2021] [Indexed: 12/01/2022] Open
Abstract
Four of the coordination compounds of the general formula, [M(DPPP)(APY)(H2O) Cl2].xH2O, where M = Ni(II), Cu(II), Mn(II), and Fe(II) and x = 0, 1, or 2 molecules of H2O, DPPP = 1,3-bis(diphenylphosphino)propane, and APY = 2-aminopyridine, have been prepared and characterized. The structure of the complexes has been confirmed by elemental analysis, FT-IR, and UV-Vis spectral data. Thermal analysis (thermogravimetry, derivative thermogravimetry, and differential thermal studies) has been used to study the thermal decomposition stages. Biological activity of all synthesized complexes was tested against five bacterial strains and three fungal strains. Bacteria and fungi strains are common contaminants of the environment in Saudi Arabia, some of which are frequently reported from contaminated water, soil, and food.
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Liu JQ, Luo ZD, Pan Y, Kumar Singh A, Trivedi M, Kumar A. Recent developments in luminescent coordination polymers: Designing strategies, sensing application and theoretical evidences. Coord Chem Rev 2020. [DOI: 10.1016/j.ccr.2019.213145] [Citation(s) in RCA: 263] [Impact Index Per Article: 65.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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Supramolecular assembled networks in crystal structure built up of copper(II) dipicolinates with pyrazine- and pyridinecarboxamides connected through hydrogen bonds. Polyhedron 2018. [DOI: 10.1016/j.poly.2018.04.014] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Masárová P, Kuchtanin V, Mazúr M, Moncol J. Crystal structures and spectroscopic properties of copper(II)–dipicolinate complexes with benzimidazole ligands. TRANSIT METAL CHEM 2018. [DOI: 10.1007/s11243-018-0236-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Kim D, Kang SK. Crystal structure of aqua-(1 H-pyrazole-κ N2)(pyridine-2,6-di-carboxyl-ato-κ 3O2, N, O6)copper(II) dihydrate. Acta Crystallogr E Crystallogr Commun 2017; 73:1875-1877. [PMID: 29250406 PMCID: PMC5730243 DOI: 10.1107/s2056989017016231] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2017] [Accepted: 11/10/2017] [Indexed: 03/28/2024]
Abstract
In the title compound, [Cu(C7H3NO4)(C3H4N2)(H2O)]·2H2O, the CuII atom is coordinated by three O atoms and two N atoms, provided by a tridentate pyridine-2,6-di-carboxyl-ate (pdc), one pyrazole and one water ligand, forming a slightly distorted square-pyramidal geometry [range of O-Cu-O and O-Cu-N bond angles = 79.55 (8)-166.22 (10)°]. The water mol-ecule is positioned at the apical position. In the crystal, the complex mol-ecule and the two crystallographically independent non-coordinating water mol-ecules are linked into a supra-molecular layer structure parallel to the ab plane via O-H⋯O and N-H⋯O hydrogen bonds.
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Affiliation(s)
- Daeyoung Kim
- Department of Chemistry, Chungnam National University, Daejeon 34134, Republic of Korea
| | - Sung Kwon Kang
- Department of Chemistry, Chungnam National University, Daejeon 34134, Republic of Korea
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Demir S, Çepni HM, Hołyńska M, Kavanoz M, Yilmaz F, Zorlu Y. Copper(II) complexes with pyridine-2,6-dicarboxylic acid from the oxidation of copper(I) iodide. J COORD CHEM 2017. [DOI: 10.1080/00958972.2017.1393071] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- Selçuk Demir
- Faculty of Arts and Sciences, Department of Chemistry, Recep Tayyip Erdoğan University, Rize, Turkey
| | - Hamide Merve Çepni
- Faculty of Arts and Sciences, Department of Chemistry, Recep Tayyip Erdoğan University, Rize, Turkey
| | | | - Muammer Kavanoz
- Faculty of Arts and Sciences, Department of Chemistry, Recep Tayyip Erdoğan University, Rize, Turkey
| | - Fatih Yilmaz
- Faculty of Arts and Sciences, Department of Chemistry, Recep Tayyip Erdoğan University, Rize, Turkey
| | - Yunus Zorlu
- Department of Chemistry, Gebze Technical University, Gebze, Turkey
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Mistri S, Zangrando E, Vojtíšek P, Manna SC. 1D, 2D, and 2D Parallel Interpenetrated Dicarboxylato Bridged Co(II) Metal Organic Frameworks: Synthesis, Crystal Structure, Fluorescence Sensing and Band Gap Calculation. ChemistrySelect 2017. [DOI: 10.1002/slct.201700237] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Soumen Mistri
- Department of Chemistry and Chemical Technology; Vidyasagar University; Midnapore 721102, West Bengal India
| | - Ennio Zangrando
- Department of Chemical and Pharmaceutical Sciences; University of Trieste; 34127 Trieste Italy
| | - Pavel Vojtíšek
- Department of Inorganic Chemistry; Charles University in Prague; Hlavova 2030/8 128 43 Prague 2 Czech Republic
| | - Subal Chandra Manna
- Department of Chemistry and Chemical Technology; Vidyasagar University; Midnapore 721102, West Bengal India
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Guan L, Wang Y. Hydrothermal synthesis, crystal structure, and properties of a novel tetranuclear calcium complex constructed with aromatic sulfonate-carboxylate ligand. INORG NANO-MET CHEM 2017. [DOI: 10.1080/15533174.2015.1137318] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Affiliation(s)
- Lei Guan
- School of Chemistry and Materials Science, Liaoning Shihua University, Fushun, P. R. China
| | - Ying Wang
- School of Chemistry and Materials Science, Liaoning Shihua University, Fushun, P. R. China
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Leotério DM, Silva PA, Souza GC, Alves ADA, Belian MF, Galembeck A, Lavorante AF. Copper–4,4′-dipyridyl coordination compound as solid reagent for spectrophotometric determination of reducing sugar employing a multicommutation approach. Food Control 2015. [DOI: 10.1016/j.foodcont.2015.04.017] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Guan L, Wang Y. A novel second-order non-linear optical coordination polymer with three-fold interpenetrated CdSO4-type network constructed by carboxylate–sulfonate ligands and strontium ions. J SOLID STATE CHEM 2015. [DOI: 10.1016/j.jssc.2015.07.008] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Byrne JP, Kitchen JA, Gunnlaugsson T. The btp [2,6-bis(1,2,3-triazol-4-yl)pyridine] binding motif: a new versatile terdentate ligand for supramolecular and coordination chemistry. Chem Soc Rev 2015; 43:5302-25. [PMID: 24871484 DOI: 10.1039/c4cs00120f] [Citation(s) in RCA: 128] [Impact Index Per Article: 14.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Ligands containing the btp [2,6-bis(1,2,3-triazol-4-yl)pyridine] motif have appeared with increasing regularity over the last decade. This class of ligands, formed in a one pot ‘click’ reaction, has been studied for various purposes, such as for generating d and f metal coordination complexes and supramolecular self-assemblies, and in the formation of dendritic and polymeric networks, etc. This review article introduces btp as a novel and highly versatile terdentate building block with huge potential in inorganic supramolecular chemistry. We will focus on the coordination chemistry of btp ligands with a wide range of metals, and how it compares with other classical pyridyl and polypyridyl based ligands, and then present a selection of applications including use in catalysis, enzyme inhibition, photochemistry, molecular logic and materials, e.g. polymers, dendrimers and gels. The photovoltaic potential of triazolium derivatives of btp and its interactions with anions will also be discussed.
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Affiliation(s)
- Joseph P Byrne
- School of Chemistry and Trinity Biomedical Sciences Institute, Trinity College Dublin, University of Dublin, Pearse St, Dublin 2, Ireland.
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Bhunia A, Manna S, Mistri S, Paul A, Manne RK, Santra MK, Bertolasi V, Chandra Manna S. Synthesis, characterization, TDDFT calculation and biological activity of tetradentate ligand based square pyramidal Cu(ii) complexes. RSC Adv 2015. [DOI: 10.1039/c5ra12324k] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Fluorescent Cu(ii) compounds have been synthesized, and characterized by structure analyses and DFT/TD-DFT calculations. Compounds show catecholase and anticancer activities.
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Affiliation(s)
- Apurba Bhunia
- Department of Chemistry and Chemical Technology
- Vidyasagar University
- Midnapore 721102
- India
| | - Soumen Manna
- Department of Chemistry and Chemical Technology
- Vidyasagar University
- Midnapore 721102
- India
| | - Soumen Mistri
- Department of Chemistry and Chemical Technology
- Vidyasagar University
- Midnapore 721102
- India
| | - Aparup Paul
- Department of Chemistry and Chemical Technology
- Vidyasagar University
- Midnapore 721102
- India
| | | | | | - Valerio Bertolasi
- Dipartimento di Scienze Chimiche e Farmaceutiche
- Centro di Strutturistica Diffrattometrica
- Università di Ferrara
- 44100 Ferrara
- Italy
| | - Subal Chandra Manna
- Department of Chemistry and Chemical Technology
- Vidyasagar University
- Midnapore 721102
- India
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Bhunia A, Zangrando E, Mistri S, Manna SC. Oxalato-bridged oligonuclear complexes of cadmium(II)/lead(II) with bipyridine coligands: Synthesis, crystal structure, electronic spectra, density functional theory calculation and effect of organic compounds on the fluorescence property. Inorganica Chim Acta 2014. [DOI: 10.1016/j.ica.2013.10.001] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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