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Limarev IP, Zelinskii GE, Belova SA, Dorovatovskii PV, Vologzhanina AV, Lebed EG, Voloshin YZ. Monoribbed‐functionalized macrobicyclic iron(
II
) complexes decorated with terminal reactive and vector groups: synthetic strategy towards, chemical transformations and structural characterization. CHINESE J CHEM 2022. [DOI: 10.1002/cjoc.202200191] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Ilya P. Limarev
- Nesmeyanov Institute of Organoelement Compounds of the Russian Academy of Sciences, 28 Vavilova st. 119991 Moscow Russia
- Kurnakov Institute of General and Inorganic Chemistry of the Russian Academy of Sciences, 31 Leninsky pr. 119991 Moscow Russia
| | - Genrikh E. Zelinskii
- Nesmeyanov Institute of Organoelement Compounds of the Russian Academy of Sciences, 28 Vavilova st. 119991 Moscow Russia
- Kurnakov Institute of General and Inorganic Chemistry of the Russian Academy of Sciences, 31 Leninsky pr. 119991 Moscow Russia
| | - Svetlana A. Belova
- Nesmeyanov Institute of Organoelement Compounds of the Russian Academy of Sciences, 28 Vavilova st. 119991 Moscow Russia
- Kurnakov Institute of General and Inorganic Chemistry of the Russian Academy of Sciences, 31 Leninsky pr. 119991 Moscow Russia
| | | | - Anna V. Vologzhanina
- Nesmeyanov Institute of Organoelement Compounds of the Russian Academy of Sciences, 28 Vavilova st. 119991 Moscow Russia
| | - Ekaterina G. Lebed
- Nesmeyanov Institute of Organoelement Compounds of the Russian Academy of Sciences, 28 Vavilova st. 119991 Moscow Russia
- Kurnakov Institute of General and Inorganic Chemistry of the Russian Academy of Sciences, 31 Leninsky pr. 119991 Moscow Russia
| | - Yan Z. Voloshin
- Nesmeyanov Institute of Organoelement Compounds of the Russian Academy of Sciences, 28 Vavilova st. 119991 Moscow Russia
- Kurnakov Institute of General and Inorganic Chemistry of the Russian Academy of Sciences, 31 Leninsky pr. 119991 Moscow Russia
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2
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New boron-capped cage manganese(II) complex with terminal thiophene-2-carboxaldehyde groups: Crystal structure and density functional theory investigation for electron transfer. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2020.128481] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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3
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Intermolecular Interactions in Functional Crystalline Materials: From Data to Knowledge. CRYSTALS 2019. [DOI: 10.3390/cryst9090478] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
Intermolecular interactions of organic, inorganic, and organometallic compounds are the key to many composition–structure and structure–property networks. In this review, some of these relations and the tools developed by the Cambridge Crystallographic Data Center (CCDC) to analyze them and design solid forms with desired properties are described. The potential of studies supported by the Cambridge Structural Database (CSD)-Materials tools for investigation of dynamic processes in crystals, for analysis of biologically active, high energy, optical, (electro)conductive, and other functional crystalline materials, and for the prediction of novel solid forms (polymorphs, co-crystals, solvates) are discussed. Besides, some unusual applications, the potential for further development and limitations of the CCDC software are reported.
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4
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Bila JL, Marmier M, Zhurov KO, Scopelliti R, Živković I, Rønnow HM, Shaik NE, Sienkiewicz A, Fink C, Severin K. Homo- and Heterodinuclear Iron Clathrochelate Complexes with Functional Groups in the Ligand Periphery. Eur J Inorg Chem 2018. [DOI: 10.1002/ejic.201800045] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- José L. Bila
- École Polytechnique Fédérale de Lausanne (EPFL); Institut des Sciences et Ingénierie Chimiques; 1015 Lausanne Switzerland
| | - Mathieu Marmier
- École Polytechnique Fédérale de Lausanne (EPFL); Institut des Sciences et Ingénierie Chimiques; 1015 Lausanne Switzerland
| | - Konstantin O. Zhurov
- École Polytechnique Fédérale de Lausanne (EPFL); Institut des Sciences et Ingénierie Chimiques; 1015 Lausanne Switzerland
| | - Rosario Scopelliti
- École Polytechnique Fédérale de Lausanne (EPFL); Institut des Sciences et Ingénierie Chimiques; 1015 Lausanne Switzerland
| | | | | | | | | | - Cornel Fink
- École Polytechnique Fédérale de Lausanne (EPFL); Institut des Sciences et Ingénierie Chimiques; 1015 Lausanne Switzerland
| | - Kay Severin
- École Polytechnique Fédérale de Lausanne (EPFL); Institut des Sciences et Ingénierie Chimiques; 1015 Lausanne Switzerland
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5
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Bolotin DS, Bokach NA, Demakova MY, Kukushkin VY. Metal-Involving Synthesis and Reactions of Oximes. Chem Rev 2017; 117:13039-13122. [PMID: 28991449 DOI: 10.1021/acs.chemrev.7b00264] [Citation(s) in RCA: 132] [Impact Index Per Article: 18.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
This review classifies and summarizes the past 10-15 years of advancements in the field of metal-involving (i.e., metal-mediated and metal-catalyzed) reactions of oximes. These reactions are diverse in nature and have been employed for syntheses of oxime-based metal complexes and cage-compounds, oxime functionalizations, and the preparation of new classes of organic species, in particular, a wide variety of heterocyclic systems spanning small 3-membered ring systems to macroheterocycles. This consideration gives a general outlook of reaction routes, mechanisms, and driving forces and underlines the potential of metal-involving conversions of oxime species for application in various fields of chemistry and draws attention to the emerging putative targets.
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Affiliation(s)
- Dmitrii S Bolotin
- Institute of Chemistry, Saint Petersburg State University , Universitetskaya Nab., 7/9, Saint Petersburg, Russian Federation
| | - Nadezhda A Bokach
- Institute of Chemistry, Saint Petersburg State University , Universitetskaya Nab., 7/9, Saint Petersburg, Russian Federation
| | - Marina Ya Demakova
- Institute of Chemistry, Saint Petersburg State University , Universitetskaya Nab., 7/9, Saint Petersburg, Russian Federation
| | - Vadim Yu Kukushkin
- Institute of Chemistry, Saint Petersburg State University , Universitetskaya Nab., 7/9, Saint Petersburg, Russian Federation
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6
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Zelinskii GE, Dudkin SV, Chuprin AS, Pavlov AA, Vologzhanina AV, Lebed EG, Zubavichus YV, Voloshin YZ. Synthesis, X-ray structure and reactivity of the vinyl-terminated iron(II) clathrochelate precursors and their cage derivatives with non-equivalent capping groups. Inorganica Chim Acta 2017. [DOI: 10.1016/j.ica.2017.04.011] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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7
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Jansze SM, Wise MD, Vologzhanina AV, Scopelliti R, Severin K. Pd II2L 4-type coordination cages up to three nanometers in size. Chem Sci 2017; 8:1901-1908. [PMID: 28567267 PMCID: PMC5444114 DOI: 10.1039/c6sc04732g] [Citation(s) in RCA: 74] [Impact Index Per Article: 10.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2016] [Accepted: 11/09/2016] [Indexed: 12/25/2022] Open
Abstract
The utilization of large ligands in coordination-based self-assembly represents an attractive strategy for the construction of supramolecular assemblies more than two nanometers in size. However, the implementation of this strategy is hampered by the fact that the preparation of such ligands often requires substantial synthetic effort. Herein, we describe a simple one-step protocol, which allows large bipyridyl ligands with a bent shape to be synthesized from easily accessible and/or commercially available starting materials. The ligands were used to construct PdII2L4-type coordination cages of unprecedented size. Furthermore, we provide evidence that these cages may be stabilized by close intramolecular packing of lipophilic ligand side chains. Packing effects of this kind are frequently encountered in protein assemblies, but they are seldom used as a design element in metallasupramolecular chemistry.
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Affiliation(s)
- Suzanne M Jansze
- Institut des Sciences et Ingénierie Chimiques , Ecole Polytechnique Fédérale de Lausanne (EPFL) , 1015 Lausanne , Switzerland .
| | - Matthew D Wise
- Institut des Sciences et Ingénierie Chimiques , Ecole Polytechnique Fédérale de Lausanne (EPFL) , 1015 Lausanne , Switzerland .
| | - Anna V Vologzhanina
- Nesmeyanov Institute of Organoelement Compounds of the Russian Academy of Sciences , 119991 Moscow , Russia
| | - Rosario Scopelliti
- Institut des Sciences et Ingénierie Chimiques , Ecole Polytechnique Fédérale de Lausanne (EPFL) , 1015 Lausanne , Switzerland .
| | - Kay Severin
- Institut des Sciences et Ingénierie Chimiques , Ecole Polytechnique Fédérale de Lausanne (EPFL) , 1015 Lausanne , Switzerland .
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8
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Template synthesis and X-ray structure of the tris-glyoximate iron(II) clathrochelates with terminal reactive groups. Inorganica Chim Acta 2016. [DOI: 10.1016/j.ica.2016.08.019] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
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9
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Jansze SM, Cecot G, Wise MD, Zhurov KO, Ronson TK, Castilla AM, Finelli A, Pattison P, Solari E, Scopelliti R, Zelinskii GE, Vologzhanina AV, Voloshin YZ, Nitschke JR, Severin K. Ligand Aspect Ratio as a Decisive Factor for the Self-Assembly of Coordination Cages. J Am Chem Soc 2016; 138:2046-54. [PMID: 26854982 DOI: 10.1021/jacs.5b13190] [Citation(s) in RCA: 117] [Impact Index Per Article: 14.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
It is possible to control the geometry and the composition of metallasupramolecular assemblies via the aspect ratio of their ligands. This point is demonstrated for a series of iron- and palladium-based coordination cages. Functionalized clathrochelate complexes with variable aspect ratios were used as rod-like metalloligands. A cubic Fe(II)8L12 cage was obtained from a metalloligand with an intermediate aspect ratio. By increasing the length or by decreasing the width of the ligand, the self-assembly process resulted in the clean formation of tetrahedral Fe(II)4L6 cages instead of cubic cages. In a related fashion, it was possible to control the geometry of Pd(II)-based coordination cages. A metalloligand with a large aspect ratio gave an entropically favored tetrahedral Pd(II)4L8 assembly, whereas an octahedral Pd(II)6L12 cage was formed with a ligand of the same length but with an increased width. The aspect ratio can also be used to control the composition of dynamic mixtures of Pd(II) cages. Out of two metalloligands with only marginally different aspect ratios, one gave rise to a self-sorted collection of Pd(II)4L8 and Pd(II)6L12 cages, whereas the other did not.
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Affiliation(s)
- Suzanne M Jansze
- Institut des Sciences et Ingénierie Chimiques, École Polytechnique Fédérale de Lausanne (EPFL) , CH-1015 Lausanne, Switzerland
| | - Giacomo Cecot
- Institut des Sciences et Ingénierie Chimiques, École Polytechnique Fédérale de Lausanne (EPFL) , CH-1015 Lausanne, Switzerland
| | - Matthew D Wise
- Institut des Sciences et Ingénierie Chimiques, École Polytechnique Fédérale de Lausanne (EPFL) , CH-1015 Lausanne, Switzerland
| | - Konstantin O Zhurov
- Institut des Sciences et Ingénierie Chimiques, École Polytechnique Fédérale de Lausanne (EPFL) , CH-1015 Lausanne, Switzerland
| | - Tanya K Ronson
- Department of Chemistry, University of Cambridge , Cambridge CB2 1EW, United Kingdom
| | - Ana M Castilla
- Department of Chemistry, University of Cambridge , Cambridge CB2 1EW, United Kingdom
| | - Alba Finelli
- Institut des Sciences et Ingénierie Chimiques, École Polytechnique Fédérale de Lausanne (EPFL) , CH-1015 Lausanne, Switzerland
| | - Philip Pattison
- Laboratory of Crystallography, Ecole Polytechnique Fédérale de Lausanne (EPFL) , CH-1015 Lausanne, Switzerland.,Swiss-Norwegian Beamline, ESRF , 38000 Grenoble, France
| | - Euro Solari
- Institut des Sciences et Ingénierie Chimiques, École Polytechnique Fédérale de Lausanne (EPFL) , CH-1015 Lausanne, Switzerland
| | - Rosario Scopelliti
- Institut des Sciences et Ingénierie Chimiques, École Polytechnique Fédérale de Lausanne (EPFL) , CH-1015 Lausanne, Switzerland
| | - Genrikh E Zelinskii
- Nesmeyanov Institute of Organoelement Compounds of the Russian Academy of Sciences , 119991 Moscow, Russia
| | - Anna V Vologzhanina
- Nesmeyanov Institute of Organoelement Compounds of the Russian Academy of Sciences , 119991 Moscow, Russia
| | - Yan Z Voloshin
- Nesmeyanov Institute of Organoelement Compounds of the Russian Academy of Sciences , 119991 Moscow, Russia
| | - Jonathan R Nitschke
- Department of Chemistry, University of Cambridge , Cambridge CB2 1EW, United Kingdom
| | - Kay Severin
- Institut des Sciences et Ingénierie Chimiques, École Polytechnique Fédérale de Lausanne (EPFL) , CH-1015 Lausanne, Switzerland
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10
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Cecot G, Alameddine B, Prior S, Zorzi RD, Geremia S, Scopelliti R, Fadaei FT, Solari E, Severin K. Large heterometallic coordination cages with gyrobifastigium-like geometry. Chem Commun (Camb) 2016; 52:11243-11246. [DOI: 10.1039/c6cc06066h] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
Large coordination cages with unusual gyrobifastigium-like geometry were obtained by combining cis-blocked PtII or PdII complexes with clathrochelate-based metalloligands.
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Affiliation(s)
- Giacomo Cecot
- Institut des Sciences et Ingénierie Chimiques
- École Polytechnique Fédérale de Lausanne (EPFL)
- 1015 Lausanne
- Switzerland
| | - Bassam Alameddine
- Department of Mathematics and Natural Sciences
- Gulf University of Science & Technology (GUST)
- Kuwait
| | - Stéphanie Prior
- Institut des Sciences et Ingénierie Chimiques
- École Polytechnique Fédérale de Lausanne (EPFL)
- 1015 Lausanne
- Switzerland
| | - Rita De Zorzi
- Centro di Eccellenza in Biocristallografia
- Dipartimento di Scienze Chimiche e Farmaceutiche
- Università di Trieste
- Trieste
- Italy
| | - Silvano Geremia
- Centro di Eccellenza in Biocristallografia
- Dipartimento di Scienze Chimiche e Farmaceutiche
- Università di Trieste
- Trieste
- Italy
| | - Rosario Scopelliti
- Institut des Sciences et Ingénierie Chimiques
- École Polytechnique Fédérale de Lausanne (EPFL)
- 1015 Lausanne
- Switzerland
| | - Farzaneh T. Fadaei
- Institut des Sciences et Ingénierie Chimiques
- École Polytechnique Fédérale de Lausanne (EPFL)
- 1015 Lausanne
- Switzerland
| | - Euro Solari
- Institut des Sciences et Ingénierie Chimiques
- École Polytechnique Fédérale de Lausanne (EPFL)
- 1015 Lausanne
- Switzerland
| | - Kay Severin
- Institut des Sciences et Ingénierie Chimiques
- École Polytechnique Fédérale de Lausanne (EPFL)
- 1015 Lausanne
- Switzerland
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