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Majumdar D, Philip JE, Gassoumi B, Ayachi S, Abdelaziz B, Tüzün B, Roy S. Supramolecular clumps of μ 2-1,3-acetate bridges of Cd(II)-Salen complex: Synthesis, spectroscopic characterization, crystal structure, DFT quantization's, and antifungal photodynamic therapy. Heliyon 2024; 10:e29856. [PMID: 38707382 PMCID: PMC11066650 DOI: 10.1016/j.heliyon.2024.e29856] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2024] [Revised: 04/11/2024] [Accepted: 04/16/2024] [Indexed: 05/07/2024] Open
Abstract
The article divulges the crystal growth, synthesis, and X-ray structure characterization of one centrosymmetric cadmium complex, [Cd{CdL(μ2-1,3-acetate)}2] using Salen ligand (SL). The complex is further characterized using spectroscopic and analytical techniques, including DRS, SEM-EDX, PXRD, and ICP-MS. The crystallographic study showed that the complex has a monoclinic space P21/c. Addison parameters (Ʈ) show the hexagonal geometry of the central Cd(II) metal ion. Hirshfeld surface and 2-D fingerprint confirm supramolecular contacts despite weak C-H⋯O and C-H···π interactions. Energy frameworks, FMOs, global reactivity parameters, MEP, and energy bandgap explain the complex reactivity outlook. The complex inter- and intramolecular bonding interactions were explored through natural bond orbital (NBO), QTAIM, NCI-RDG, Electron Location Function (ELF), and Localized Orbital Locator (LOL) quantization methods. In addition, the complex and its synthetic components in vitro antibacterial efficacy were investigated using Gram-positive and Gram-negative microbial strains. SAR (structure-activity relationship) correlates with biological potency. Molecular docking assessed antimicrobial potency with proteins S. aureus (PDB ID: 1JIJ), C. albicans (PDB ID: 1M7A), E. coli (PDB ID: 1T9U), P. aeruginosa (PDB ID: 2UV0), and A. Niger (PDB ID: 3K4P). The findings are backed by the Protein-Ligand Interaction Profiler (PLIP). The antifungal potency and cell viability test of C. albicans were conducted using photodynamic therapy (APDT).
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Affiliation(s)
- Dhrubajyoti Majumdar
- Department of Chemistry, Tamralipta Mahavidyalaya, Tamluk, 721636, West Bengal, India
| | | | - Bouzid Gassoumi
- Laboratory of Advanced Materials and Interfaces (LIMA), University of Monastir, Faculty of Sciences of Monastir, Avenue of Environment, 5000, Monastir, Tunisia
| | - Sahbi Ayachi
- Laboratory of Physico-Chemistry of Materials (LR01ES19), Faculty of Sciences, Avenue of the Environment 5019 Monastir, University of Monastir, Tunisia
| | - Balkis Abdelaziz
- Laboratory of Physico-Chemistry of Materials (LR01ES19), Faculty of Sciences, Avenue of the Environment 5019 Monastir, University of Monastir, Tunisia
| | - Burak Tüzün
- Sivas Cumhuriyet University, Sivas Vocational School, Department of Plant and Animal Production, TR-58140, Sivas, Turkey
| | - Sourav Roy
- Solid State and Structural Chemistry Unit, Indian Institute of Science, Bangalore, 560012, India
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Sahli S, Lefebvre F, Jelsch C, Ben Nasr C, Kaabi K. Synthesis, Crystal Structure, Hirshfeld Surface Analysis and DFT Calculations of Two New Cu(II) and Cd(II) Complexes with the 4-Amino-6-methoxypyrimidine Ligand. RUSS J COORD CHEM+ 2022. [DOI: 10.1134/s1070328422080061] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Illán-Cabeza NA, Jiménez-Pulido SB, Hueso-Ureña F, Ramírez-Expósito MJ, Sánchez-Sánchez P, Martínez-Martos JM, Moreno-Carretero MN. Effects on estrogen-dependent and triple negative breast cancer cells growth of Ni(II), Zn(II) and Cd(II) complexes with the Schiff base derived from pyridine-2-carboxaldehyde and 5,6-diamino-1,3-dimethyluracil explored through the renin-angiotensin system (RAS)-regulating aminopeptidases. J Inorg Biochem 2018; 185:52-62. [PMID: 29763768 DOI: 10.1016/j.jinorgbio.2018.04.022] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2017] [Revised: 04/16/2018] [Accepted: 04/30/2018] [Indexed: 01/02/2023]
Abstract
A series of Ni(II), Zn(II) and Cd(II) complexes with the Schiff base derived from the condensation 1:1 from pyridine-2-carboxaldehyde and 5,6-diamino-1,3-dimethyluracil (6-amino-1,3-dimethyl-5-[(pyridin-2-ylmethylidene)-amino]pyrimidine-2,4(1H,3H)-dione, DAAUPic) were synthesized and subsequently characterized by means of elemental analysis, FT-IR, NMR and nine of them by X-ray diffraction. Except the [Zn(μ-O,O'-AcO)(N5,N6,N1F-DAAUPicH-1)]2 and [Cd(O,O'-NO3)(μ-O4,(N5,N6,N1F)-DAAUPicH-1)(H2O)]2·2H2O dimers and the [Cd(μ-S,N-SCN)(N5,N6,N1F-DAAUPicH-1)]n chain-like polymer, all of them display monomeric molecular structures. The anticancer activity of compounds was also explored studying their effects on renin-angiotensin system (RAS)-regulating aminopeptidases on estrogen-dependent and triple negative breast cancer cell lines. At the concentrations used, some of the complexes showed different effects on (RAS) peptidases, which support the idea that their effects on cell growth/proliferation could be related to autocrine/paracrine regulatory functions of their corresponding peptide substrates.
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Majumdar D, Biswas JK, Mondal M, Babu MSS, Das S, Metre RK, SreeKumar SS, Bankura K, Mishra D. Cd(II) Pseudohalide Complexes with N, N′-Bis(3-ethoxysalicylidenimino) 1,3-Diaminopropane: Crystal Structures, Hirshfeld Surface, Antibacterial and Anti-Biofilm Properties. ChemistrySelect 2018. [DOI: 10.1002/slct.201702970] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Affiliation(s)
- Dhrubajyoti Majumdar
- Department of Chemistry; Tamralipta Mahavidyalaya; Tamluk-721636, West Bengal India
| | - Jayanta Kumar Biswas
- Department of Ecological Studies & International Centre for Ecological Engineering; University of Kalyani; Kalyani 741235, West Bengal India
| | - Monojit Mondal
- Department of Ecological Studies & International Centre for Ecological Engineering; University of Kalyani; Kalyani 741235, West Bengal India
| | | | - Sourav Das
- Department of Chemistry; Institute of Infrastructure Technology Research and Management; Near Khokhara Circle, Maninagar East Ahmedabad-380026 Gujarat India
| | - Ramesh K. Metre
- Department of Chemistry; Indian Institute of Technology Jodhpur; Rajasthan 342037 India
| | - Sreejith S. SreeKumar
- Department of Applied Chemistry; Cochin University of Science and Technology; Kochi 682022, Kerala India
| | - Kalipada Bankura
- Department of Chemistry; Tamralipta Mahavidyalaya; Tamluk-721636, West Bengal India
| | - Dipankar Mishra
- Department of Chemistry; Tamralipta Mahavidyalaya; Tamluk-721636, West Bengal India
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Azam M, Al-Resayes SI, Wabaidur SM, Trzesowska-Kruszynska A, Kruszynski R, Mohapatra RK, Siddiqui MRH. Cd(II) complex constructed from dipyridyl imine ligand: Design, synthesis and exploration of its photocatalytic degradation properties. Inorganica Chim Acta 2018. [DOI: 10.1016/j.ica.2017.12.005] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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Ghosh K, Harms K, Bauzá A, Frontera A, Chattopadhyay S. σ-Hole halogen bonding interactions in a mixed valence cobalt(iii/ii) complex and anti-electrostatic hydrogen bonding interaction in a cobalt(iii) complex: a theoretical insight. CrystEngComm 2018. [DOI: 10.1039/c8ce01323c] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Supramolecular interactions in the solid state structures of a mixed valence cobalt(ii/iii) complex and a cobalt(iii) complex have been studied using DFT calculations.
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Affiliation(s)
- Kousik Ghosh
- Department of Chemistry
- Inorganic Section
- Jadavpur University
- Kolkata - 700032
- India
| | - Klaus Harms
- Fachbereich Chemie
- Philipps-Universität Marburg
- D-35032 Marburg
- Germany
| | - Antonio Bauzá
- Departamento de Química
- Universitat de les Illes Balears
- 07122 Palma
- Spain
| | - Antonio Frontera
- Departamento de Química
- Universitat de les Illes Balears
- 07122 Palma
- Spain
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Roy S, Bhattacharyya A, Herrero S, González-Prieto R, Frontera A, Chattopadhyay S. Accidental Orthogonality Induced Weak Magnetic Coupling in a Dinuclear Copper(II) Complex: Exploration of Unconventional C-H⋅⋅⋅π(SCN) Interactions and Catechol Oxidase Activity. ChemistrySelect 2017. [DOI: 10.1002/slct.201701016] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Sourav Roy
- Department of Chemistry, Inorganic Section; Jadavpur University; Kolkata - 700032 India
| | - Anik Bhattacharyya
- Department of Chemistry, Inorganic Section; Jadavpur University; Kolkata - 700032 India
| | - Santiago Herrero
- Departamento de Química Inorgánica I, Facultad de Ciencias Químicas; Universidad Complutense de Madrid, Ciudad Universitaria; 28040 Madrid Spain
| | - Rodrigo González-Prieto
- Departamento de Química Inorgánica I, Facultad de Ciencias Químicas; Universidad Complutense de Madrid, Ciudad Universitaria; 28040 Madrid Spain
| | - Antonio Frontera
- Departament de Química; Universitat de les Illes Balears; Crta de Valldemossa km 7.5 07122 Palma de Mallorca (Baleares) Spain
| | - Shouvik Chattopadhyay
- Department of Chemistry, Inorganic Section; Jadavpur University; Kolkata - 700032 India
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Majumdar D, Babu MSS, Das S, Mohapatra C, Biswas JK, Mondal M. Syntheses, X-ray Crystal Structures, Photoluminescence Properties, Antimicrobial Activities and Hirshfeld Surface of Two New Cd(II) Azide/Thiocyanate Linked Coordination Polymers. ChemistrySelect 2017. [DOI: 10.1002/slct.201700743] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Dhrubajyoti Majumdar
- Department of Chemistry; Tamralipta Mahavidyalaya; Tamluk-721636, West Bengal India
| | - M. S. Surendra Babu
- Department of Chemistry; GITAM University, Hyderabad Campus; Hyderabab-502329 India
| | - Sourav Das
- Department of Chemistry; Institute of Infrastructure Technology Research and Management, Near Khokhara Circle, Maninagar East; Ahmedabad-380026, Gujarat India
| | - Chandrajeet Mohapatra
- Framework Solids Laboratory; Solid State and Structural Chemistry Unit; Indian Institute of Science, Bangalore-560012, India
| | - Jayanta Kumar Biswas
- Department of Ecological Studies & International Centre for Ecological Engineering; University of Kalyani; Kalyani-741235, West Bengal India
| | - Monojit Mondal
- Department of Ecological Studies & International Centre for Ecological Engineering; University of Kalyani; Kalyani-741235, West Bengal India
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Roy S, Harms K, Chattopadhyay S. Synthesis, characterization and photocatalytic activity of a dinuclear thiocyanate bridged cadmium(II) Schiff base complex. Polyhedron 2017. [DOI: 10.1016/j.poly.2016.10.008] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Borbone F, Caruso U, Concilio S, Nabha S, Piotto S, Shikler R, Tuzi A, Panunzi B. From cadmium(II)-aroylhydrazone complexes to metallopolymers with enhanced photoluminescence. A structural and DFT study. Inorganica Chim Acta 2017. [DOI: 10.1016/j.ica.2017.01.002] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
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Şahin Ö, Özdemir ÜÖ, Seferoğlu N, Aydıner B, Sarı M, Tunç T, Seferoğlu Z. A highly selective and sensitive chemosensor derived coumarin–thiazole for colorimetric and fluorimetric detection of CN− ion in DMSO and aqueous solution: synthesis, sensing ability, Pd(II)/Pt(II) complexes and theoretical studies. Tetrahedron 2016. [DOI: 10.1016/j.tet.2016.08.004] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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