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Gatto CC, Dias LM, Paiva CA, da Silva ICR, Freire DO, Tormena RPI, Nascimento ÉCM, Martins JBL. Effects of changing ions on the crystal design, non-covalent interactions, antimicrobial activity, and molecular docking of Cu(II) complexes with a pyridoxal-hydrazone ligand. Front Chem 2024; 12:1347370. [PMID: 38361747 PMCID: PMC10867249 DOI: 10.3389/fchem.2024.1347370] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2023] [Accepted: 01/05/2024] [Indexed: 02/17/2024] Open
Abstract
The present work reports the influence of the presence of different ions (Cl-, Br-, NO3 -, or SO4 2-) on the formation and proprieties of Cu(II) complexes with pyridoxal-benzoylhydrazone (PLBHZ). Four new complexes were successfully synthesized, [CuCl2(PLBHZ)] (1), [CuBr2(PLBHZ)] (2), [CuCl(PLBHZ)H2O]⋅NO3⋅H2O (3), and [CuSO4(PLBHZ)H2O]⋅3H2O (4), and characterized by spectroscopic and physicochemical methods. A single-crystal X-ray study reveals the Schiff base coordinated to the metal center tridentate by the ONS-donor system, resulting in distorted square pyramidal coordination geometries. Noncovalent interactions were investigated by 3D Hirshfeld surface analysis by the d norm function, 2D fingerprint plots, and full interaction maps. The ion exchange is important in forming three-dimensional networks with π⋅⋅⋅π stacking interactions and intermolecular hydrogen bonds. The in vitro biological activity of the free ligand and metal complexes was evaluated against Gram-positive and Gram-negative bacterial strains and the free pyridoxal-hydrazone ligand showed higher activity than their Cu(II) complexes. Molecular docking was used to predict the inhibitory activity of the ligand and complexes against Gram-positive Staphylococcus aureus and Gram-negative Escherichia coli bacteria.
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Affiliation(s)
- Claudia C. Gatto
- Laboratory of Inorganic Synthesis and Crystallography, Institute of Chemistry, University of Brasilia, Brasília-DF, Brazil
| | - Lucas M. Dias
- Laboratory of Inorganic Synthesis and Crystallography, Institute of Chemistry, University of Brasilia, Brasília-DF, Brazil
| | - Clarisse A. Paiva
- Laboratory of Inorganic Synthesis and Crystallography, Institute of Chemistry, University of Brasilia, Brasília-DF, Brazil
| | - Izabel C. R. da Silva
- Graduate Program in Health Sciences and Technologies, Faculty UnB Ceilândia, University of Brasilia, Brasília-DF, Brazil
| | - Daniel O. Freire
- Graduate Program in Health Sciences and Technologies, Faculty UnB Ceilândia, University of Brasilia, Brasília-DF, Brazil
| | - Renata P. I. Tormena
- Graduate Program in Health Sciences and Technologies, Faculty UnB Ceilândia, University of Brasilia, Brasília-DF, Brazil
| | - Érica C. M. Nascimento
- Laboratory of Computational Chemistry, Institute of Chemistry, University of Brasilia, Brasília-DF, Brazil
| | - João B. L. Martins
- Laboratory of Computational Chemistry, Institute of Chemistry, University of Brasilia, Brasília-DF, Brazil
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2
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Kanagavalli A, Jayachitra R, Thilagavathi G, Padmavathy M, Elangovan N, Sowrirajan S, Thomas R. Synthesis, structural, spectral, computational, docking and biological activities of Schiff base (E)-4-bromo-2-hydroxybenzylidene) amino)-N-(pyrimidin-2-yl) benzenesulfonamide from 5-bromosalicylaldehyde and sulfadiazine. J INDIAN CHEM SOC 2022. [DOI: 10.1016/j.jics.2022.100823] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/04/2022]
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3
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Jayachitra R, Padmavathy M, Kanagavalli A, Thilagavathi G, Elangovan N, S.Sowrirajan, Thomas R. Synthesis, computational, experimental antimicrobial activities and theoretical molecular docking studies of (E)-4-((4-hydroxy-3-methoxy-5-nitrobenzylidene) amino)-N-(thiazole-2-yl) benzenesulfonamide. J INDIAN CHEM SOC 2022. [DOI: 10.1016/j.jics.2022.100824] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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4
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Synthesis, spectral, structural features, electronic properties, biological activities, computational, wave function properties, and molecular docking studies of (E)-4-(((pentafluorophenyl) methylene) amino)-N-(pyrimidin2-yl)benzenesulfonamide. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.133472] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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5
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Muthukumar R, Karnan M, Elangovan N, Karunanidhi M, Thomas R. Synthesis, spectral analysis, antibacterial activity, quantum chemical studies and supporting molecular docking of Schiff base (E)-4-((4-bromobenzylidene) amino)benzenesulfonamide. J INDIAN CHEM SOC 2022. [DOI: 10.1016/j.jics.2022.100405] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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6
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Geethapriya J, Shanthidevi A, Arivazhagan M, Elangovan N, Thomas R. Synthesis, structural, DFT, quantum chemical modeling and molecular docking studies of (E)-4-(((5-methylfuran-2-yl)methylene)amino) benzenesulfonamide from 5-methyl-2-furaldehyde and sulfanilamide. J INDIAN CHEM SOC 2022. [DOI: 10.1016/j.jics.2022.100418] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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7
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Wang S, You Z, Qian HY. Copper(II) and cadmium(II) complexes of mono-condensed N,O- or N,N,O-Donor ligands: synthesis, crystal structures, and antibacterial activity. INORG NANO-MET CHEM 2022. [DOI: 10.1080/24701556.2021.2025087] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- Shiyi Wang
- Department of Chemistry and Chemical Engineering, Liaoning Normal University, Dalian, P.R. China
| | - Zhonglu You
- Department of Chemistry and Chemical Engineering, Liaoning Normal University, Dalian, P.R. China
| | - Heng-Yu Qian
- Key Laboratory of Surface & Interface Science of Henan, School of Material & Chemical Engineering, Zhengzhou University of Light Industry, Zhengzhou, P.R. China
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8
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Parvarinezhad S, Salehi M, Eshaghi Malekshah R, Kubicki M, Khaleghian A. Synthesis, characterization, spectral studies two new transition metal complexes derived from pyrazolone by theoretical studies, and investigate anti‐proliferative activity. Appl Organomet Chem 2022. [DOI: 10.1002/aoc.6563] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Affiliation(s)
| | - Mehdi Salehi
- Department of Chemistry, Faculty of Science Semnan University Semnan Iran
| | | | - Maciej Kubicki
- Department of Chemistry Adam Mickiewicz University Poznan Poland
| | - Ali Khaleghian
- Faculty of Medicine, Biochemistry Department Semnan University of Medical Sciences Semnan Iran
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9
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Qian HY. Copper(II) and cadmium(II) complexes of mono-condensed N,O- or N,N,O-Donor ligands: synthesis, crystal structures, and antibacterial activity. INORG NANO-MET CHEM 2021. [DOI: 10.1080/24701556.2021.1917611] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Affiliation(s)
- Heng-Yu Qian
- Key Laboratory of Surface & Interface Science of Henan, School of Material & Chemical Engineering, Zhengzhou University of Light Industry, Zhengzhou, P.R. China
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Samoľová E, Dehno Khalaji A, Eigner V. 4-Bromo-2-[({2-[(2-hy-droxy-eth-yl)amino]-eth-yl}imino)-meth-yl]phenol. IUCRDATA 2021; 6:x210335. [PMID: 36339102 PMCID: PMC9462328 DOI: 10.1107/s2414314621003357] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2021] [Accepted: 03/29/2021] [Indexed: 11/10/2022] Open
Abstract
The new title Schiff base compound, C11H15BrN2O2, crystallizes in the monoclinic space group P21 with two independent mol-ecules in the asymmetric unit. It was prepared by the condensation reaction of 5-bromo-2-hy-droxy-benzaldehyde and amino-ethyl-ethano-lamine. There is an intra-molecular O-H⋯N hydrogen bond with an S(6) ring motif. Moreover, there are inter-molecular C-H⋯N, C-H⋯O and Br⋯O inter-actions in the crystal structure of the title compound.
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Affiliation(s)
- Erika Samoľová
- Institute of Physics AS CR, v.v.i., Na Slovance 2, 182 21 Prague 8, Czech Republic
| | | | - Václav Eigner
- Institute of Physics AS CR, v.v.i., Na Slovance 2, 182 21 Prague 8, Czech Republic
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11
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Galini M, Salehi M, Kubicki M, Bayat M, Malekshah RE. Synthesis, structural characterization, DFT and molecular simulation study of new zinc-Schiff base complex and its application as a precursor for preparation of ZnO nanoparticle. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2020.127715] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
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12
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Abd El-Wahab H, Abd El-Fattah M, El-alfy H, Owda M, Lin L, Hamdy I. Synthesis and characterisation of sulphonamide (Schiff base) ligand and its copper metal complex and their efficiency in polyurethane varnish as flame retardant and antimicrobial surface coating additives. PROGRESS IN ORGANIC COATINGS 2020; 142:105577. [DOI: 10.1016/j.porgcoat.2020.105577] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/01/2023]
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13
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Roozbahani P, Salehi M, Malekshah RE, Kubicki M. Synthesis, crystal structure, electrochemical behavior and docking molecular of poly-nuclear metal complexes of Schiff base ligand derived from 2-amino benzyl alcohol. Inorganica Chim Acta 2019. [DOI: 10.1016/j.ica.2019.119022] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
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14
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Xing AP, Zeng D, Zhang SL, Wei JJ, Guo DF. Crystal structure of 2-((1 H-benzo[ d]imidazol-2-ylimino)methyl)-4,6-di- tert-butylphenol, C 22H 27N 3O. Z KRIST-NEW CRYST ST 2019. [DOI: 10.1515/ncrs-2019-0009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Abstract
C22H27N3O, monoclinic, P21/c (no. 14), a = 18.4984(4) Å, b = 11.4221(3) Å, c = 9.79600(19) Å, β = 90.9652(19)°, V = 2069.51(8) Å3, Z = 4, R
gt(F) = 0.0605, wR
ref(F
2) = 0.1773, T = 293(2) K.
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Affiliation(s)
- Ai-Ping Xing
- College of Pharmacy, Henan University of Chinese Medicine , Zhengzhou 450046 , P.R. China
| | - Dai Zeng
- College of Pharmacy, Henan University of Chinese Medicine , Zhengzhou 450046 , P.R. China
| | - Shu-Ling Zhang
- College of Pharmacy, Henan University of Chinese Medicine , Zhengzhou 450046 , P.R. China
| | - Jun-Jun Wei
- College of Pharmacy, Henan University of Chinese Medicine , Zhengzhou 450046 , P.R. China
| | - Da-Feng Guo
- College of Pharmacy, Henan University of Chinese Medicine , Zhengzhou 450046 , P.R. China
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Rostamizadeh S, Daneshfar Z, Moghimi H. Synthesis of sulfamethoxazole and sulfabenzamide metal complexes; evaluation of their antibacterial activity. Eur J Med Chem 2019; 171:364-371. [DOI: 10.1016/j.ejmech.2019.03.002] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2018] [Revised: 02/03/2019] [Accepted: 03/01/2019] [Indexed: 10/27/2022]
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16
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Synthesis, characterization and crystal structures of two novel sulfa drug Schiff base ligands derived sulfonamide and molecular docking study. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2018.12.002] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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17
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Sha F, Mitchell BS, Ye CZ, Abelson CS, Reinheimer EW, LeMagueres P, Ferrara JD, Takase MK, Johnson AR. Catalytic intramolecular hydroamination of aminoallenes using titanium complexes of chiral, tridentate, dianionic imine-diol ligands. Dalton Trans 2019; 48:9603-9616. [PMID: 30778494 DOI: 10.1039/c8dt05156a] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Alkylation of d- or l-phenylalanine or valine alkyl esters was carried out using methyl or phenyl Grignard reagents. Subsequent condensation with salicylaldehyde, 3,5-di-tert-butylsalicylaldehyde, or 5-fluorosalicylaldehyde formed tridentate, X2L type, Schiff base ligands. Chiral shift NMR confirmed retention of stereochemistry during synthesis. X-ray crystal structures of four of the ligands show either inter- or intramolecular hydrogen bonding interactions. The ligands coordinate to the titanium reagents Ti(NMe2)4 or TiCl(NMe2)3 by protonolysis and displacement of two equivalents of HNMe2. The crystal structure of one example of Ti(X2L)Cl(NMe2) was determined and the complex has a distorted square pyramidal geometry with an axial NMe2 ligand. The bis-dimethylamide complexes are active catalysts for the ring closing hydroamination of di- and trisubstituted aminoallenes. The reaction of hepta-4,5-dienylamine at 135 °C with 5 mol% catalyst gives a mixture of 6-ethyl-2,3,4,5-tetrahydropyridine (40-72%) and both Z- and E-2-propenyl-pyrrolidine (25-52%). The ring closing reaction of 6-methyl-hepta-4,5-dienylamine at 135 °C with 5 mol% catalyst gives exclusively 2-(2-methyl-propenyl)-pyrrolidine. The pyrrolidine products are obtained with enantiomeric excesses up to 17%.
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Affiliation(s)
- Fanrui Sha
- Harvey Mudd College, 301 Platt Blvd., Claremont, CA 91711, USA.
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18
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Sıdır YG, Aslan C, Berber H, Sıdır İ. The electronic structure, solvatochromism, and electric dipole moments of new Schiff base derivatives using absorbance and fluorescence spectra. Struct Chem 2018. [DOI: 10.1007/s11224-018-1228-8] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
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19
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Radha V, Jone Kirubavathy S, Chitra S. Synthesis, characterization and biological investigations of novel Schiff base ligands containing imidazoline moiety and their Co(II) and Cu(II) complexes. J Mol Struct 2018. [DOI: 10.1016/j.molstruc.2018.03.109] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
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20
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Gönül İ, Fakı E, Ay B, Köse M, Serin S. Cobalt(II), nickel(II) and copper(II) complexes of a Schiff base ligand: synthesis, structural characterization and luminescence properties. TRANSIT METAL CHEM 2017. [DOI: 10.1007/s11243-017-0195-z] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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21
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Sun WH, Wu LL, Ye L, Xin Y, Zhang Y, Liu H, Lv KW, Shang CN, You Z, Li W. Two mononuclear nickel(II) complexes with Schiff base ligands: Synthesis, crystal structures, and antibacterial activities. INORG NANO-MET CHEM 2017. [DOI: 10.1080/24701556.2017.1284126] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Wei-Hang Sun
- Department of Radiology, The Second Hospital of Dalian Medical University, Dalian, P. R. China
| | - Lu-Lu Wu
- Department of Radiology, The Second Hospital of Dalian Medical University, Dalian, P. R. China
| | - Lei Ye
- Department of Chemistry and Chemical Engineering, Liaoning Normal University, Dalian, P. R. China
| | - Yu Xin
- Department of Chemistry and Chemical Engineering, Liaoning Normal University, Dalian, P. R. China
| | - Yan Zhang
- Department of Chemistry and Chemical Engineering, Liaoning Normal University, Dalian, P. R. China
| | - Hui Liu
- Department of Chemistry and Chemical Engineering, Liaoning Normal University, Dalian, P. R. China
| | - Kai-Wen Lv
- Department of Chemistry and Chemical Engineering, Liaoning Normal University, Dalian, P. R. China
| | - Chao-Nan Shang
- Department of Chemistry and Chemical Engineering, Liaoning Normal University, Dalian, P. R. China
| | - Zhonglu You
- Department of Chemistry and Chemical Engineering, Liaoning Normal University, Dalian, P. R. China
| | - Wei Li
- Department of Radiology, The Second Hospital of Dalian Medical University, Dalian, P. R. China
- Department of Hepatobiliary and Pancreatic Surgery, The Second Hospital of Dalian Medical University, Dalian, P. R. China
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Nithya P, Simpson J, Govindarajan S. Template synthesis, structural variation, thermal behavior and antimicrobial screening of Mn(II), Co(II) and Ni(II) complexes of Schiff base ligands derived from benzyl carbazate and three isomers of acetylpyridine. Inorganica Chim Acta 2017. [DOI: 10.1016/j.ica.2017.07.059] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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23
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Jafari M, Salehi M, Kubicki M, Arab A, Khaleghian A. DFT studies and antioxidant activity of Schiff base metal complexes of 2-aminopyridine. Crystal structures of cobalt(II) and zinc(II) complexes. Inorganica Chim Acta 2017. [DOI: 10.1016/j.ica.2017.04.007] [Citation(s) in RCA: 39] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
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Abbasi Z, Salehi M, Kubicki M, Khaleghian A. Crystal structures, electrochemical properties, antioxidant screening and in vitro cytotoxic studies on four novel Cu(II) complexes of bidentate Schiff base ligands derived from 2-methoxyethylamine. J COORD CHEM 2017. [DOI: 10.1080/00958972.2017.1323082] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Affiliation(s)
- Zeinab Abbasi
- Department of Chemistry, Semnan University, Semnan, Iran
| | - Mehdi Salehi
- Department of Chemistry, Semnan University, Semnan, Iran
| | - Maciej Kubicki
- Faculty of Chemistry, Adam Mickiewicz University, Poznan, Poland
| | - Ali Khaleghian
- Faculty of Medicine, Biochemistry Department, Semnan University of Medical Sciences, Semnan, Iran
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