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Dodek M, Miklovičová E. Estimation of process noise variances from the measured output sequence with application to the empirical model of type 1 diabetes. Biomed Signal Process Control 2023. [DOI: 10.1016/j.bspc.2023.104773] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/09/2023]
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Engell SE, Aradottir TB, Bengtsson H, Jorgensen JB. Correlation in Dose-Response to Rapid- and Long-Acting Insulin for People with Type 1 Diabetes. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2022; 2022:2240-2243. [PMID: 36086287 DOI: 10.1109/embc48229.2022.9871574] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
In diabetes, it can become necessary to switch between pump- and pen-based insulin treatment. This switch involves a translation between rapid- and long-acting insulin analogues. In standard-of-care translation algorithms, a unit-to-unit conversion is applied. However, this simplification may not fit all individuals. In this paper, we investigate the correlation between dose-response to rapid- and long-acting insulin in the same individual, and compare the correlation across individuals. As a measure of dose-response, we estimate the insulin sensitivity in clinical data from 25 subjects with type 1 diabetes. For parameter estimation, we use maximum likelihood with a continuous-discrete extended Kalman filter and Bergman's minimal model. The results show a weak correlation between insulin sensitivity to rapid- and long-acting insulin across individuals. On this sparse data set, the analysis suggests that the standardized unit-to-unit translation between insulin analogues may not benefit all subjects.
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Sevil M, Rashid M, Hajizadeh I, Park M, Quinn L, Cinar A. Physical Activity and Psychological Stress Detection and Assessment of Their Effects on Glucose Concentration Predictions in Diabetes Management. IEEE Trans Biomed Eng 2021; 68:2251-2260. [PMID: 33400644 PMCID: PMC8265613 DOI: 10.1109/tbme.2020.3049109] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
OBJECTIVE Continuous glucose monitoring (CGM) enables prediction of the future glucose concentration (GC) trajectory for making informed diabetes management decisions. The glucose concentration values are affected by various physiological and metabolic variations, such as physical activity (PA) and acute psychological stress (APS), in addition to meals and insulin. In this work, we extend our adaptive glucose modeling framework to incorporate the effects of PA and APS on the GC predictions. METHODS A wristband conducive of use by free-living ambulatory people is used. The measured physiological variables are analyzed to generate new quantifiable input features for PA and APS. Machine learning techniques estimate the type and intensity of the PA and APS when they occur individually and concurrently. Variables quantifying the characteristics of both PA and APS are integrated as exogenous inputs in an adaptive system identification technique for enhancing the accuracy of GC predictions. Data from clinical experiments illustrate the improvement in GC prediction accuracy. RESULTS The average mean absolute error (MAE) of one-hour-ahead GC predictions with testing data decreases from 35.1 to 31.9 mg/dL (p-value = 0.01) with the inclusion of PA information, and it decreases from 16.9 to 14.2 mg/dL (p-value = 0.006) with the inclusion of PA and APS information. CONCLUSION The first-ever glucose prediction model is developed that incorporates measures of physical activity and acute psychological stress to improve GC prediction accuracy. SIGNIFICANCE Modeling the effects of physical activity and acute psychological stress on glucose concentration values will improve diabetes management and enable informed meal, activity and insulin dosing decisions.
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Lee I, Probst D, Klonoff D, Sode K. Continuous glucose monitoring systems - Current status and future perspectives of the flagship technologies in biosensor research -. Biosens Bioelectron 2021; 181:113054. [DOI: 10.1016/j.bios.2021.113054] [Citation(s) in RCA: 35] [Impact Index Per Article: 11.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2020] [Revised: 01/23/2021] [Accepted: 01/27/2021] [Indexed: 12/14/2022]
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Clausen H, Knudsen T, Al Ahdab M, Aradottir T, Schmidt S, Norgaard K, Leth J. A New Stochastic Approach for Modeling Glycemic Disturbances in Type 2 Diabetes. IEEE Trans Biomed Eng 2021; 68:3161-3172. [PMID: 33881986 DOI: 10.1109/tbme.2021.3074868] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
OBJECTIVE To improve insulin treatment in type 2 diabetes (T2D) using model-based control techniques, the underlying model needs to be individualized to each patient. Due to the impact of unknown meals, exercise and other factors on the blood glucose, it is difficult to utilize available data from continuous glucose monitors (CGMs) for model fitting and parameter estimation purposes. METHODS To overcome this problem, we propose a novel method for modeling the glycemic disturbances as a stochastic process. To differentiate meals from other glycemic disturbances, we model the meal intake as a separate stochastic process while encompassing all other disturbances in another stochastic process. Using particle filtering, we validate the model on simulations as well as on clinical data. RESULTS Based on simulated CGM data, the residuals generated by the particle filter are white, indicating a good model fit. For the clinical data, we use parameter values estimated based on fasting glucose data. The residuals obtained from clinical CGM data contain correlations up to lag 5. CONCLUSION The proposed model is shown to adequately describe the meal-induced glucose fluctuations in simulated CGM data while validations on clinical CGM data show promising results as well. SIGNIFICANCE The proposed model may lay the grounds for new ways of utilizing available CGM data, including CGM-based parameter estimation and stochastic optimal control.
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Lahoz-Beltra R, Rodriguez RJ. Modeling a cancerous tumor development in a virtual patient suffering from a depressed state of mind: Simulation of somatic evolution with a customized genetic algorithm. Biosystems 2020; 198:104261. [DOI: 10.1016/j.biosystems.2020.104261] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2020] [Revised: 09/26/2020] [Accepted: 09/27/2020] [Indexed: 12/19/2022]
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Hajizadeh I, Rashid M, Cinar A. Plasma-Insulin-Cognizant Adaptive Model Predictive Control for Artificial Pancreas Systems. JOURNAL OF PROCESS CONTROL 2019; 77:97-113. [PMID: 31814659 PMCID: PMC6897508 DOI: 10.1016/j.jprocont.2019.03.009] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/06/2023]
Abstract
An adaptive model predictive control (MPC) algorithm with dynamic adjustments of constraints and objective function weights based on estimates of the plasma insulin concentration (PIC) is proposed for artificial pancreas (AP) systems. A personalized compartment model that translates the infused insulin into estimates of PIC is integrated with a recursive subspace-based system identification to characterize the transient dynamics of glycemic measurements. The system identification approach is able to identify stable, reliable linear time-varying models from closed-loop data. An MPC algorithm using the adaptive models is designed to compute the optimal exogenous insulin delivery for AP systems without requiring any manually-entered meal information. A dynamic safety constraint derived from the estimation of PIC is incorporated in the adaptive MPC to improve the efficacy of the AP and prevent insulin overdosing. Simulation case studies demonstrate the performance of the proposed adaptive MPC algorithm.
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Affiliation(s)
- Iman Hajizadeh
- Dept of Chemical and Biological Engineering, Illinois Institute of Technology, Chicago, IL 60616
| | - Mudassir Rashid
- Dept of Chemical and Biological Engineering, Illinois Institute of Technology, Chicago, IL 60616
| | - Ali Cinar
- Dept of Chemical and Biological Engineering, Illinois Institute of Technology, Chicago, IL 60616
- Dept of Biomedical Engineering, Illinois Institute of Technology, Chicago, IL 60616
- Correspondence concerning this article should be addressed to A. Cinar at
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Staal OM, Salid S, Fougner A, Stavdahl O. Kalman Smoothing for Objective and Automatic Preprocessing of Glucose Data. IEEE J Biomed Health Inform 2019; 23:218-226. [DOI: 10.1109/jbhi.2018.2811706] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Hajizadeh I, Rashid M, Turksoy K, Samadi S, Feng J, Sevil M, Hobbs N, Lazaro C, Maloney Z, Littlejohn E, Cinar A. Incorporating Unannounced Meals and Exercise in Adaptive Learning of Personalized Models for Multivariable Artificial Pancreas Systems. J Diabetes Sci Technol 2018; 12:953-966. [PMID: 30060699 PMCID: PMC6134614 DOI: 10.1177/1932296818789951] [Citation(s) in RCA: 32] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
BACKGROUND Despite the recent advancements in the modeling of glycemic dynamics for type 1 diabetes mellitus, automatically considering unannounced meals and exercise without manual user inputs remains challenging. METHOD An adaptive model identification technique that incorporates exercise information and estimates of the effects of unannounced meals obtained automatically without user input is proposed in this work. The effects of the unknown consumed carbohydrates are estimated using an individualized unscented Kalman filtering algorithm employing an augmented glucose-insulin dynamic model, and exercise information is acquired from noninvasive physiological measurements. The additional information on meals and exercise is incorporated with personalized estimates of plasma insulin concentration and glucose measurement data in an adaptive model identification algorithm. RESULTS The efficacy of the proposed personalized and adaptive modeling algorithm is demonstrated using clinical data involving closed-loop experiments of the artificial pancreas system, and the results demonstrate accurate glycemic modeling with the average root-mean-square error (mean absolute error) of 25.50 mg/dL (18.18 mg/dL) for six-step (30 minutes ahead) predictions. CONCLUSIONS The approach presented is able to identify reliable time-varying individualized glucose-insulin models.
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Affiliation(s)
- Iman Hajizadeh
- Department of Chemical and Biological Engineering, Illinois Institute of Technology, Chicago, IL, USA
| | - Mudassir Rashid
- Department of Chemical and Biological Engineering, Illinois Institute of Technology, Chicago, IL, USA
| | - Kamuran Turksoy
- Department of Biomedical Engineering, Illinois Institute of Technology, Chicago, IL, USA
| | - Sediqeh Samadi
- Department of Chemical and Biological Engineering, Illinois Institute of Technology, Chicago, IL, USA
| | - Jianyuan Feng
- Department of Chemical and Biological Engineering, Illinois Institute of Technology, Chicago, IL, USA
| | - Mert Sevil
- Department of Biomedical Engineering, Illinois Institute of Technology, Chicago, IL, USA
| | - Nicole Hobbs
- Department of Biomedical Engineering, Illinois Institute of Technology, Chicago, IL, USA
| | - Caterina Lazaro
- Department of Electrical and Computer Engineering, Illinois Institute of Technology, Chicago, IL, USA
| | - Zacharie Maloney
- Department of Biomedical Engineering, Illinois Institute of Technology, Chicago, IL, USA
| | - Elizabeth Littlejohn
- Department of Pediatrics and Medicine, Section of Endocrinology, Kovler Diabetes Center, University of Chicago, Chicago, IL, USA
| | - Ali Cinar
- Department of Chemical and Biological Engineering, Illinois Institute of Technology, Chicago, IL, USA
- Department of Biomedical Engineering, Illinois Institute of Technology, Chicago, IL, USA
- Ali Cinar, PhD, Illinois Institute of Technology, Department of Chemical and Biological Engineering, 10 W 33rd St, Chicago, IL 60616, USA.
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Goel N, Chaspari T, Mortazavi BJ, Prioleau T, Sabharwal A, Gutierrez-Osuna R. Knowledge-driven dictionaries for sparse representation of continuous glucose monitoring signals. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2018; 2018:191-194. [PMID: 30440370 DOI: 10.1109/embc.2018.8512262] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Continuous glucose monitoring (CGM) of patients with diabetes allows the effective management of the disease and reduces the risk of hypoglycemic or hyperglycemic episodes. Towards this goal, the development of reliable CGM models is essential for representing the corresponding signals and interpreting them with respect to factors and outcomes of interest. We propose a sparse decomposition model to approximate CGM time-series as a linear combination of a small set of exemplar atoms, appropriately designed through parametric functions to capture the main fluctuations of the CGM signal. Sparse decomposition is performed through the orthogonal matching pursuit (OMP). Results indicate that the proposed model provides 0.1 relative reconstruction error with 0.8 compression rate on a publicly available dataset containing 25 patients diagnosed with Type 1 diabetes. The atoms selected from the OMP procedure can be further interpreted in relation to the clinically meaningful components of the CGM signal (e.g. glucose spikes, hypoglycemic episodes, etc.
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Boiroux D, Aradóttir TB, Nørgaard K, Poulsen NK, Madsen H, Jørgensen JB. An Adaptive Nonlinear Basal-Bolus Calculator for Patients With Type 1 Diabetes. J Diabetes Sci Technol 2017; 11:29-36. [PMID: 27613658 PMCID: PMC5375076 DOI: 10.1177/1932296816666295] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
BACKGROUND Bolus calculators help patients with type 1 diabetes to mitigate the effect of meals on their blood glucose by administering a large amount of insulin at mealtime. Intraindividual changes in patients physiology and nonlinearity in insulin-glucose dynamics pose a challenge to the accuracy of such calculators. METHOD We propose a method based on a continuous-discrete unscented Kalman filter to continuously track the postprandial glucose dynamics and the insulin sensitivity. We augment the Medtronic Virtual Patient (MVP) model to simulate noise-corrupted data from a continuous glucose monitor (CGM). The basal rate is determined by calculating the steady state of the model and is adjusted once a day before breakfast. The bolus size is determined by optimizing the postprandial glucose values based on an estimate of the insulin sensitivity and states, as well as the announced meal size. Following meal announcements, the meal compartment and the meal time constant are estimated, otherwise insulin sensitivity is estimated. RESULTS We compare the performance of a conventional linear bolus calculator with the proposed bolus calculator. The proposed basal-bolus calculator significantly improves the time spent in glucose target ( P < .01) compared to the conventional bolus calculator. CONCLUSION An adaptive nonlinear basal-bolus calculator can efficiently compensate for physiological changes. Further clinical studies will be needed to validate the results.
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Affiliation(s)
- Dimitri Boiroux
- Department of Applied Mathematics and Computer Science, Technical University of Denmark, Kgs. Lyngby, Denmark
- Danish Diabetes Academy, Odense, Denmark
| | - Tinna Björk Aradóttir
- Department of Applied Mathematics and Computer Science, Technical University of Denmark, Kgs. Lyngby, Denmark
| | - Kirsten Nørgaard
- Department of Endocrinology, Copenhagen University Hospital, Hvidovre, Denmark
| | - Niels Kjølstad Poulsen
- Department of Applied Mathematics and Computer Science, Technical University of Denmark, Kgs. Lyngby, Denmark
| | - Henrik Madsen
- Department of Applied Mathematics and Computer Science, Technical University of Denmark, Kgs. Lyngby, Denmark
| | - John Bagterp Jørgensen
- Department of Applied Mathematics and Computer Science, Technical University of Denmark, Kgs. Lyngby, Denmark
- John Bagterp Jørgensen, PhD, DTU Compute, Technical University of Denmark, Richard Petersens Plads, DK-2800 Kgs. Lyngby, Denmark.
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