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Agrahari AK, Bose P, Jaiswal MK, Rajkhowa S, Singh AS, Hotha S, Mishra N, Tiwari VK. Cu(I)-Catalyzed Click Chemistry in Glycoscience and Their Diverse Applications. Chem Rev 2021; 121:7638-7956. [PMID: 34165284 DOI: 10.1021/acs.chemrev.0c00920] [Citation(s) in RCA: 154] [Impact Index Per Article: 51.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
Copper(I)-catalyzed 1,3-dipolar cycloaddition between organic azides and terminal alkynes, commonly known as CuAAC or click chemistry, has been identified as one of the most successful, versatile, reliable, and modular strategies for the rapid and regioselective construction of 1,4-disubstituted 1,2,3-triazoles as diversely functionalized molecules. Carbohydrates, an integral part of living cells, have several fascinating features, including their structural diversity, biocompatibility, bioavailability, hydrophilicity, and superior ADME properties with minimal toxicity, which support increased demand to explore them as versatile scaffolds for easy access to diverse glycohybrids and well-defined glycoconjugates for complete chemical, biochemical, and pharmacological investigations. This review highlights the successful development of CuAAC or click chemistry in emerging areas of glycoscience, including the synthesis of triazole appended carbohydrate-containing molecular architectures (mainly glycohybrids, glycoconjugates, glycopolymers, glycopeptides, glycoproteins, glycolipids, glycoclusters, and glycodendrimers through regioselective triazole forming modular and bio-orthogonal coupling protocols). It discusses the widespread applications of these glycoproducts as enzyme inhibitors in drug discovery and development, sensing, gelation, chelation, glycosylation, and catalysis. This review also covers the impact of click chemistry and provides future perspectives on its role in various emerging disciplines of science and technology.
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Affiliation(s)
- Anand K Agrahari
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh 221005, India
| | - Priyanka Bose
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh 221005, India
| | - Manoj K Jaiswal
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh 221005, India
| | - Sanchayita Rajkhowa
- Department of Chemistry, Jorhat Institute of Science and Technology (JIST), Jorhat, Assam 785010, India
| | - Anoop S Singh
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh 221005, India
| | - Srinivas Hotha
- Department of Chemistry, Indian Institute of Science and Engineering Research (IISER), Pune, Maharashtra 411021, India
| | - Nidhi Mishra
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh 221005, India
| | - Vinod K Tiwari
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh 221005, India
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Structural basis of the inhibition of GH1 β-glucosidases by multivalent pyrrolidine iminosugars. Bioorg Chem 2019; 89:103026. [DOI: 10.1016/j.bioorg.2019.103026] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2019] [Revised: 05/24/2019] [Accepted: 05/30/2019] [Indexed: 12/11/2022]
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Immobilization of β-galactosidase and α-mannosidase onto magnetic nanoparticles: A strategy for increasing the potentiality of valuable glycomic tools for glycosylation analysis and biological role determination of glycoconjugates. Enzyme Microb Technol 2018; 117:45-55. [DOI: 10.1016/j.enzmictec.2018.05.012] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2017] [Revised: 04/27/2018] [Accepted: 05/21/2018] [Indexed: 01/08/2023]
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Mirabella S, D'Adamio G, Matassini C, Goti A, Delgado S, Gimeno A, Robina I, Moreno-Vargas AJ, Šesták S, Jiménez-Barbero J, Cardona F. Mechanistic Insight into the Binding of Multivalent Pyrrolidines to α-Mannosidases. Chemistry 2017; 23:14585-14596. [DOI: 10.1002/chem.201703011] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2017] [Indexed: 11/11/2022]
Affiliation(s)
- Stefania Mirabella
- Dipartimento di Chimica “Ugo Schiff”; Università degli Studi di Firenze; Via della Lastruccia 3-13 50019 Sesto Fiorentino (FI) Italy
- CIC bioGUNE; Bizkaia Science and Technology Park; Building 801A 48160 Derio Spain
| | - Giampiero D'Adamio
- Dipartimento di Chimica “Ugo Schiff”; Università degli Studi di Firenze; Via della Lastruccia 3-13 50019 Sesto Fiorentino (FI) Italy
| | - Camilla Matassini
- Dipartimento di Chimica “Ugo Schiff”; Università degli Studi di Firenze; Via della Lastruccia 3-13 50019 Sesto Fiorentino (FI) Italy
- CNR-INO; Via N. Carrara 1 Sesto Fiorentino (FI) Italy
| | - Andrea Goti
- Dipartimento di Chimica “Ugo Schiff”; Università degli Studi di Firenze; Via della Lastruccia 3-13 50019 Sesto Fiorentino (FI) Italy
- CNR-INO; Via N. Carrara 1 Sesto Fiorentino (FI) Italy
| | - Sandra Delgado
- CIC bioGUNE; Bizkaia Science and Technology Park; Building 801A 48160 Derio Spain
| | - Ana Gimeno
- CIC bioGUNE; Bizkaia Science and Technology Park; Building 801A 48160 Derio Spain
| | - Inmaculada Robina
- Departamento de Química Orgánica; Facultad de Química; Universidad de Sevilla; c/Prof. García González 1 41012 Sevilla Spain
| | - Antonio J. Moreno-Vargas
- Departamento de Química Orgánica; Facultad de Química; Universidad de Sevilla; c/Prof. García González 1 41012 Sevilla Spain
| | - Sergej Šesták
- Institute of Chemistry; Center for Glycomics; Slovak Academy of Sciences; Dúbravska cesta 9 84538 Bratislava Slovakia
| | - Jesús Jiménez-Barbero
- CIC bioGUNE; Bizkaia Science and Technology Park; Building 801A 48160 Derio Spain
- Ikerbasque; Basque Foundation for Science; Maria Diaz de Haro 5 48005 Bilbao Spain
- Departament Organic Chemistry II; EHU-UPV; 48040 Leioa Spain
| | - Francesca Cardona
- Dipartimento di Chimica “Ugo Schiff”; Università degli Studi di Firenze; Via della Lastruccia 3-13 50019 Sesto Fiorentino (FI) Italy
- CNR-INO; Via N. Carrara 1 Sesto Fiorentino (FI) Italy
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Matassini C, Parmeggiani C, Cardona F, Goti A. Are enzymes sensitive to the multivalent effect? Emerging evidence with glycosidases. Tetrahedron Lett 2016. [DOI: 10.1016/j.tetlet.2016.10.080] [Citation(s) in RCA: 44] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
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Lepage ML, Schneider JP, Bodlenner A, Meli A, De Riccardis F, Schmitt M, Tarnus C, Nguyen-Huynh NT, Francois YN, Leize-Wagner E, Birck C, Cousido-Siah A, Podjarny A, Izzo I, Compain P. Iminosugar-Cyclopeptoid Conjugates Raise Multivalent Effect in Glycosidase Inhibition at Unprecedented High Levels. Chemistry 2016; 22:5151-5. [DOI: 10.1002/chem.201600338] [Citation(s) in RCA: 43] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2016] [Indexed: 12/20/2022]
Affiliation(s)
- Mathieu L. Lepage
- Laboratoire de Synthèse Organique et Molécules Bioactives Université de Strasbourg et CNRS (UMR 7509); Ecole Européenne de Chimie, Polymères et Matériaux; 25 rue Becquerel 67087 Strasbourg France
| | - Jérémy P. Schneider
- Laboratoire de Synthèse Organique et Molécules Bioactives Université de Strasbourg et CNRS (UMR 7509); Ecole Européenne de Chimie, Polymères et Matériaux; 25 rue Becquerel 67087 Strasbourg France
| | - Anne Bodlenner
- Laboratoire de Synthèse Organique et Molécules Bioactives Université de Strasbourg et CNRS (UMR 7509); Ecole Européenne de Chimie, Polymères et Matériaux; 25 rue Becquerel 67087 Strasbourg France
| | - Alessandra Meli
- Department of Chemistry and Biology; University of Salerno; Via Giovanni Paolo II,132 84084 Fisciano, Salerno Italy
| | - Francesco De Riccardis
- Department of Chemistry and Biology; University of Salerno; Via Giovanni Paolo II,132 84084 Fisciano, Salerno Italy
| | - Marjorie Schmitt
- Université de Haute Alsace; Laboratoire de Chimie Organique et Bioorganique (EA4466), ENSCMu; 3, rue Alfred Werner 68093 Mulhouse Cedex France
| | - Céline Tarnus
- Université de Haute Alsace; Laboratoire de Chimie Organique et Bioorganique (EA4466), ENSCMu; 3, rue Alfred Werner 68093 Mulhouse Cedex France
| | - Nha-Thi Nguyen-Huynh
- Laboratoire de Spectrométrie de Masse des Interactions et des Systèmes; UMR CNRS 7140; Université de Strasbourg; 67008 Strasbourg France
| | - Yannis-Nicolas Francois
- Laboratoire de Spectrométrie de Masse des Interactions et des Systèmes; UMR CNRS 7140; Université de Strasbourg; 67008 Strasbourg France
| | - Emmanuelle Leize-Wagner
- Laboratoire de Spectrométrie de Masse des Interactions et des Systèmes; UMR CNRS 7140; Université de Strasbourg; 67008 Strasbourg France
| | - Catherine Birck
- Structural Biology Platform, CBI-IGBMC; 1 rue Laurent Fries 67404 Illkirch France
| | - Alexandra Cousido-Siah
- Department of Integrative Biology; Institut de Génétique et de Biologie Moléculaire et Cellulaire, CNRS, INSERM, UdS; 1 rue Laurent Fries 67404 Illkirch CEDEX France
| | - Alberto Podjarny
- Department of Integrative Biology; Institut de Génétique et de Biologie Moléculaire et Cellulaire, CNRS, INSERM, UdS; 1 rue Laurent Fries 67404 Illkirch CEDEX France
| | - Irene Izzo
- Department of Chemistry and Biology; University of Salerno; Via Giovanni Paolo II,132 84084 Fisciano, Salerno Italy
| | - Philippe Compain
- Laboratoire de Synthèse Organique et Molécules Bioactives Université de Strasbourg et CNRS (UMR 7509); Ecole Européenne de Chimie, Polymères et Matériaux; 25 rue Becquerel 67087 Strasbourg France
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D'Adamio G, Matassini C, Parmeggiani C, Catarzi S, Morrone A, Goti A, Paoli P, Cardona F. Evidence for a multivalent effect in inhibition of sulfatases involved in lysosomal storage disorders (LSDs). RSC Adv 2016. [DOI: 10.1039/c6ra15806d] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
New targets sensitive to multivalency: synthesis of nonavalent pyrrolidine iminosugars.
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Affiliation(s)
- G. D'Adamio
- Department of Chemistry “Ugo Schiff”
- University of Florence
- 50019 Sesto Fiorentino
- Italy
| | - C. Matassini
- Department of Chemistry “Ugo Schiff”
- University of Florence
- 50019 Sesto Fiorentino
- Italy
| | - C. Parmeggiani
- Department of Chemistry “Ugo Schiff”
- University of Florence
- 50019 Sesto Fiorentino
- Italy
- CNR – INO and LENS
| | - S. Catarzi
- Paediatric Neurology Unit and Laboratories
- Neuroscience Department
- Meyer Children's Hospital
- Department of Neurosciences
- Pharmacology and Child Health
| | - A. Morrone
- Paediatric Neurology Unit and Laboratories
- Neuroscience Department
- Meyer Children's Hospital
- Department of Neurosciences
- Pharmacology and Child Health
| | - A. Goti
- Department of Chemistry “Ugo Schiff”
- University of Florence
- 50019 Sesto Fiorentino
- Italy
| | - P. Paoli
- Department of Experimental and Clinical Biomedical Sciences
- University of Florence
- 50134 Florence
- Italy
| | - F. Cardona
- Department of Chemistry “Ugo Schiff”
- University of Florence
- 50019 Sesto Fiorentino
- Italy
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Gouin SG. Multivalent Inhibitors for Carbohydrate-Processing Enzymes: Beyond the “Lock-and-Key” Concept. Chemistry 2014; 20:11616-28. [DOI: 10.1002/chem.201402537] [Citation(s) in RCA: 93] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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Compain P, Bodlenner A. The Multivalent Effect in Glycosidase Inhibition: A New, Rapidly Emerging Topic in Glycoscience. Chembiochem 2014; 15:1239-51. [DOI: 10.1002/cbic.201402026] [Citation(s) in RCA: 92] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2014] [Indexed: 11/07/2022]
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Patel P, Gupta N, Gaikwad S, Agrawal DC, Khan BM. Leucaena sp. recombinant cinnamyl alcohol dehydrogenase: Purification and physicochemical characterization. Int J Biol Macromol 2014; 63:254-60. [DOI: 10.1016/j.ijbiomac.2013.09.005] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2013] [Revised: 09/13/2013] [Accepted: 09/13/2013] [Indexed: 10/26/2022]
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Brissonnet Y, Ortiz Mellet C, Morandat S, Garcia Moreno MI, Deniaud D, Matthews SE, Vidal S, Šesták S, El Kirat K, Gouin SG. Topological Effects and Binding Modes Operating with Multivalent Iminosugar-Based Glycoclusters and Mannosidases. J Am Chem Soc 2013; 135:18427-35. [DOI: 10.1021/ja406931w] [Citation(s) in RCA: 75] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Affiliation(s)
- Yoan Brissonnet
- LUNAM Université, CEISAM, Chimie Et Interdisciplinarité,
Synthèse, Analyse, Modélisation, UMR CNRS 6230, UFR
des Sciences et des Techniques, 2 rue de la Houssinière, BP 92208, 44322 Nantes Cedex 3, France
| | - Carmen Ortiz Mellet
- Departamento
de Química Orgánica, Facultad de Química, Universidad de Sevilla, C/Profesor García González no. 1, 41012 Sevilla, Spain
| | - Sandrine Morandat
- Laboratoire
de Génie Enzymatique et Cellulaire, FRE-CNRS 3580, Université de Technologie de Compiègne (UTC), BP 20529, 60205 Compiègne Cedex, France
| | - M. Isabel Garcia Moreno
- Departamento
de Química Orgánica, Facultad de Química, Universidad de Sevilla, C/Profesor García González no. 1, 41012 Sevilla, Spain
| | - David Deniaud
- LUNAM Université, CEISAM, Chimie Et Interdisciplinarité,
Synthèse, Analyse, Modélisation, UMR CNRS 6230, UFR
des Sciences et des Techniques, 2 rue de la Houssinière, BP 92208, 44322 Nantes Cedex 3, France
| | - Susan E. Matthews
- School
of Pharmacy, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, United Kingdom
| | - Sébastien Vidal
- Institut
de Chimie et Biochimie Moléculaires et Supramoléculaires,
Laboratoire de Chimie Organique 2 Glycochimie, UMR 5246, CNRS, Université Claude Bernard Lyon 1, F-69622 Villeurbanne, France
| | - Sergej Šesták
- Institute
of Chemistry, Center for Glycomics, Slovak Academy of Sciences, Dúbravska cesta 9, 845 38 Bratislava, Slovakia
| | - Karim El Kirat
- Laboratoire
de Biomécanique et Bioingénierie, UMR-CNRS 7338, Université de Technologie de Compiègne (UTC), BP 20529, 60205 Compiègne Cedex, France
| | - Sébastien G. Gouin
- LUNAM Université, CEISAM, Chimie Et Interdisciplinarité,
Synthèse, Analyse, Modélisation, UMR CNRS 6230, UFR
des Sciences et des Techniques, 2 rue de la Houssinière, BP 92208, 44322 Nantes Cedex 3, France
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Rísquez‐Cuadro R, García Fernández JM, Nierengarten J, Ortiz Mellet C. Fullerene‐sp
2
‐Iminosugar Balls as Multimodal Ligands for Lectins and Glycosidases: A Mechanistic Hypothesis for the Inhibitory Multivalent Effect. Chemistry 2013; 19:16791-803. [DOI: 10.1002/chem.201303158] [Citation(s) in RCA: 86] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2013] [Indexed: 01/25/2023]
Affiliation(s)
- Rocío Rísquez‐Cuadro
- Departamento de Química Orgánica, Facultad de Química, Universidad de Sevilla, C/Prof. García González 1, 41012 Sevilla (Spain)
| | - José M. García Fernández
- Instituto de Investigaciones Químicas (IIQ), CSIC ‐ Universidad de Sevilla, Av. Américo Vespucio 49, Isla de la Cartuja, 41092 Sevilla (Spain)
| | - Jean‐François Nierengarten
- Laboratoire de Chimie des Matériaux Moléculaires, Université de Strasbourg et CNRS (UMR 7509), Ecole Européenne de Chimie, Polymères et Matériaux, 25 rue Becquerel, 67087 Strasbourg (France)
| | - Carmen Ortiz Mellet
- Departamento de Química Orgánica, Facultad de Química, Universidad de Sevilla, C/Prof. García González 1, 41012 Sevilla (Spain)
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Sonawane P, Vishwakarma RK, Khan BM. Biochemical characterization of recombinant cinnamoyl CoA reductase 1 (Ll-CCRH1) from Leucaena leucocephala. Int J Biol Macromol 2013; 58:154-9. [PMID: 23541561 DOI: 10.1016/j.ijbiomac.2013.03.050] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2013] [Revised: 03/15/2013] [Accepted: 03/19/2013] [Indexed: 11/15/2022]
Abstract
Recombinant cinnamoyl CoA reductase 1 (Ll-CCRH1) protein from Leucaena leucocephala was overexpressed in Escherichia coli BL21 (DE3) strain and purified to apparent homogeneity. Optimum pH for forward and reverse reaction was found to be 6.5 and 7.8 respectively. The enzyme was most stable around pH 6.5 at 25°C for 90 min. The enzyme showed Kcat/Km for feruloyl, caffeoyl, sinapoyl, coumaroyl CoA, coniferaldehyde and sinapaldehyde as 4.6, 2.4, 2.3, 1.7, 1.9 and 1.2 (×10(6) M(-1) s(-1)), respectively, indicating affinity of enzyme for feruloyl CoA over other substrates and preference of reduction reaction over oxidation. Activation energy, Ea for various substrates was found to be in the range of 20-50 kJ/mol. Involvement of probable carboxylate ion, histidine, lysine or tyrosine at the active site of enzyme was predicted by pH activity profile. SAXS studies of protein showed radius 3.04 nm and volume 49.25 nm(3) with oblate ellipsoid shape. Finally, metal ion inhibition studies revealed that Ll-CCRH1 is a metal independent enzyme.
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Affiliation(s)
- Prashant Sonawane
- Plant Tissue Culture Division, CSIR-National Chemical Laboratory, Pune 411008, India
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