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For: Kulandaisamy A, Lathi V, Viswapoorani K, Yugandhar K, Gromiha M. Important amino acid residues involved in folding and binding of protein–protein complexes. Int J Biol Macromol 2017;94:438-44. [DOI: 10.1016/j.ijbiomac.2016.10.045] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2016] [Revised: 10/07/2016] [Accepted: 10/15/2016] [Indexed: 01/12/2023]
Number Cited by Other Article(s)
1
Wei X, Huang W, Han Y, Chen L, Wang Y, Yu S, Yang F. Allosteric mechanism of synergistic effect in α- and β-amylase mixtures. Int J Biol Macromol 2024;280:135653. [PMID: 39278430 DOI: 10.1016/j.ijbiomac.2024.135653] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2024] [Revised: 09/12/2024] [Accepted: 09/12/2024] [Indexed: 09/18/2024]
2
Arulsamy K, Xia B, Chen H, Zhang L, Chen K. Machine Learning Uncovers Vascular Endothelial Cell Identity Genes by Expression Regulation Features in Single Cells. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.08.27.609808. [PMID: 39253493 PMCID: PMC11383289 DOI: 10.1101/2024.08.27.609808] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/11/2024]
3
Yang R, Zhang B, Zhu W, Zhu C, Chen L, Zhao Y, Wang Y, Zhang Y, Riaz A, Tang B, Zhang X. Expression of Phospholipase D Family Member 6 in Bovine Testes and Its Molecular Characteristics. Int J Mol Sci 2023;24:12172. [PMID: 37569546 PMCID: PMC10418416 DOI: 10.3390/ijms241512172] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2023] [Revised: 07/25/2023] [Accepted: 07/26/2023] [Indexed: 08/13/2023]  Open
4
Halogen-Based 17β-HSD1 Inhibitors: Insights from DFT, Docking, and Molecular Dynamics Simulation Studies. MOLECULES (BASEL, SWITZERLAND) 2022;27:molecules27123962. [PMID: 35745085 PMCID: PMC9229637 DOI: 10.3390/molecules27123962] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/02/2022] [Revised: 06/03/2022] [Accepted: 06/06/2022] [Indexed: 11/17/2022]
5
Wen W, Huang D, Bao J, Zhang JZH. Residue-specific binding mechanisms of PD-L1 to its monoclonal antibodies by computational alanine scanning. Phys Chem Chem Phys 2021;23:15591-15600. [PMID: 34259259 DOI: 10.1039/d1cp01281a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
6
Kumar C, Lakshmi PTV, Arunachalam A. Computational investigation of FDA approved drugs as selective PARP-1 inhibitors by targeting BRCT domain for cancer therapy. J Mol Graph Model 2021;108:107919. [PMID: 34304979 DOI: 10.1016/j.jmgm.2021.107919] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2020] [Revised: 03/10/2021] [Accepted: 04/02/2021] [Indexed: 12/24/2022]
7
Computational prediction and redesign of aberrant protein oligomerization. PROGRESS IN MOLECULAR BIOLOGY AND TRANSLATIONAL SCIENCE 2020;169:43-83. [DOI: 10.1016/bs.pmbts.2019.11.002] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
8
Kulandaisamy A, Priya SB, Sakthivel R, Frishman D, Gromiha MM. Statistical analysis of disease‐causing and neutral mutations in human membrane proteins. Proteins 2019;87:452-466. [DOI: 10.1002/prot.25667] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2018] [Revised: 01/16/2019] [Accepted: 01/31/2019] [Indexed: 11/11/2022]
9
Zhang F, Li S, Zhang Q, Liu J, Zeng S, Liu M, Sun D. Adsorption of different types of surfactants on graphene oxide. J Mol Liq 2019. [DOI: 10.1016/j.molliq.2018.12.009] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
10
Kulandaisamy A, Srivastava A, Kumar P, Nagarajan R, Priya SB, Gromiha MM. Identification and Analysis of Key Residues in Protein-RNA Complexes. IEEE/ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS 2018;15:1436-1444. [PMID: 29993582 DOI: 10.1109/tcbb.2018.2834387] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
11
Matiolli CC, Melotto M. A Comprehensive Arabidopsis Yeast Two-Hybrid Library for Protein-Protein Interaction Studies: A Resource to the Plant Research Community. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2018;31:899-902. [PMID: 29547357 DOI: 10.1094/mpmi-02-18-0047-a] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
12
Kulandaisamy A, Srivastava A, Nagarajan R, Gromiha MM. Dissecting and analyzing key residues in protein-DNA complexes. J Mol Recognit 2017;31. [DOI: 10.1002/jmr.2692] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2017] [Revised: 11/06/2017] [Accepted: 11/06/2017] [Indexed: 02/03/2023]
13
Integrating computational methods and experimental data for understanding the recognition mechanism and binding affinity of protein-protein complexes. PROGRESS IN BIOPHYSICS AND MOLECULAR BIOLOGY 2017;128:33-38. [PMID: 28069340 DOI: 10.1016/j.pbiomolbio.2017.01.001] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/30/2016] [Revised: 01/04/2017] [Accepted: 01/05/2017] [Indexed: 01/09/2023]
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